RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PPP1R1BQ9UD71 204 aaPredicted RBP25.45■■□□□ 1.66
VPS16-204ENST00000417508 TATP17735 454 aaPredicted RBP25.44■■□□□ 1.66
VPS16-204ENST00000417508 SLC27A3Q5K4L6 730 aa25.43■■□□□ 1.66
VPS16-204ENST00000417508 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
VPS16-204ENST00000417508 MEGF6O75095 1541 aa25.42■■□□□ 1.66
VPS16-204ENST00000417508 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
VPS16-204ENST00000417508 USHBP1Q8N6Y0 703 aa25.41■■□□□ 1.66
VPS16-204ENST00000417508 EMILIN1Q9Y6C2 1016 aa25.41■■□□□ 1.66
VPS16-204ENST00000417508 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
VPS16-204ENST00000417508 WASHC2AQ641Q2 1341 aa25.4■■□□□ 1.66
VPS16-204ENST00000417508 MAP2P11137 1827 aaKnown RBP25.4■■□□□ 1.66
VPS16-204ENST00000417508 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
VPS16-204ENST00000417508 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
VPS16-204ENST00000417508 PDGFDQ9GZP0 370 aaPredicted RBP25.38■■□□□ 1.65
VPS16-204ENST00000417508 LRRC4BQ9NT99 713 aa25.37■■□□□ 1.65
VPS16-204ENST00000417508 SHANK3Q9BYB0 1731 aa25.37■■□□□ 1.65
VPS16-204ENST00000417508 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
VPS16-204ENST00000417508 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
VPS16-204ENST00000417508 ZBTB7AO95365 584 aa25.36■■□□□ 1.65
VPS16-204ENST00000417508 PANK3Q9H999 370 aa25.36■■□□□ 1.65
VPS16-204ENST00000417508 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
VPS16-204ENST00000417508 HMGB2P26583 209 aaKnown RBP25.35■■□□□ 1.65
VPS16-204ENST00000417508 MTFR1LQ9H019 292 aa25.35■■□□□ 1.65
VPS16-204ENST00000417508 PAPPAQ13219 1627 aa25.34■■□□□ 1.65
VPS16-204ENST00000417508 ANKRD26Q9UPS8 1709 aa25.33■■□□□ 1.65
VPS16-204ENST00000417508 ATF5Q9Y2D1 282 aaPredicted RBP25.33■■□□□ 1.65
VPS16-204ENST00000417508 DOT1LQ8TEK3 1739 aa25.32■■□□□ 1.64
VPS16-204ENST00000417508 DCAF8L1A6NGE4 600 aa25.32■■□□□ 1.64
VPS16-204ENST00000417508 PTGER2P43116 358 aa25.32■■□□□ 1.64
VPS16-204ENST00000417508 AKT1S1Q96B36 256 aa25.32■■□□□ 1.64
VPS16-204ENST00000417508 NSD2O96028 1365 aa25.31■■□□□ 1.64
VPS16-204ENST00000417508 NCAPD2Q15021 1401 aa25.31■■□□□ 1.64
VPS16-204ENST00000417508 SLC16A10Q8TF71 515 aa25.3■■□□□ 1.64
VPS16-204ENST00000417508 EYA1Q99502 592 aa25.3■■□□□ 1.64
VPS16-204ENST00000417508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
VPS16-204ENST00000417508 SPG7Q9UQ90 795 aa25.3■■□□□ 1.64
VPS16-204ENST00000417508 ZNF827Q17R98 1081 aa25.29■■□□□ 1.64
VPS16-204ENST00000417508 CYP27B1O15528 508 aa25.28■■□□□ 1.64
VPS16-204ENST00000417508 LY75O60449 1722 aa25.28■■□□□ 1.64
VPS16-204ENST00000417508 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
VPS16-204ENST00000417508 NKX1-1Q15270 411 aaPredicted RBP25.27■■□□□ 1.64
VPS16-204ENST00000417508 SGIP1Q9BQI5 828 aa25.27■■□□□ 1.64
VPS16-204ENST00000417508 CCNL1Q9UK58 526 aaPredicted RBP25.27■■□□□ 1.64
VPS16-204ENST00000417508 TFCP2L1Q9NZI6 479 aa25.26■■□□□ 1.63
VPS16-204ENST00000417508 KNSTRNQ9Y448 316 aa25.25■■□□□ 1.63
VPS16-204ENST00000417508 QSER1Q2KHR3 1735 aa25.24■■□□□ 1.63
VPS16-204ENST00000417508 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
VPS16-204ENST00000417508 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
VPS16-204ENST00000417508 PKD1L3Q7Z443 1732 aa25.23■■□□□ 1.63
VPS16-204ENST00000417508 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
VPS16-204ENST00000417508 SMARCC1Q92922 1105 aaPredicted RBP25.23■■□□□ 1.63
VPS16-204ENST00000417508 KCNQ4P56696 695 aa25.22■■□□□ 1.63
VPS16-204ENST00000417508 MPRIPQ6WCQ1 1025 aa25.22■■□□□ 1.63
VPS16-204ENST00000417508 ARXQ96QS3 562 aa25.21■■□□□ 1.63
VPS16-204ENST00000417508 PNPLA7Q6ZV29 1317 aa25.2■■□□□ 1.62
VPS16-204ENST00000417508 IFNL2Q8IZJ0 200 aa25.2■■□□□ 1.62
VPS16-204ENST00000417508 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
VPS16-204ENST00000417508 FHDC1Q9C0D6 1143 aaPredicted RBP25.18■■□□□ 1.62
VPS16-204ENST00000417508 ITGB4P16144 1822 aa25.18■■□□□ 1.62
VPS16-204ENST00000417508 IGSF1Q8N6C5 1336 aa25.17■■□□□ 1.62
VPS16-204ENST00000417508 POLD1P28340 1107 aa25.17■■□□□ 1.62
VPS16-204ENST00000417508 PIGBQ92521 554 aa25.17■■□□□ 1.62
VPS16-204ENST00000417508 PALLDQ8WX93 1383 aa25.17■■□□□ 1.62
VPS16-204ENST00000417508 PHKG2P15735 406 aa25.16■■□□□ 1.62
VPS16-204ENST00000417508 KIF7Q2M1P5 1343 aa25.15■■□□□ 1.62
VPS16-204ENST00000417508 FLAD1Q8NFF5 587 aa25.15■■□□□ 1.62
VPS16-204ENST00000417508 MAP3K5Q99683 1374 aa25.15■■□□□ 1.62
VPS16-204ENST00000417508 PLEKHO1Q53GL0 409 aaPredicted RBP25.13■■□□□ 1.61
VPS16-204ENST00000417508 TMOD3Q9NYL9 352 aa25.13■■□□□ 1.61
VPS16-204ENST00000417508 COL24A1Q17RW2 1714 aa25.12■■□□□ 1.61
VPS16-204ENST00000417508 TUBGCP6Q96RT7 1819 aa25.12■■□□□ 1.61
VPS16-204ENST00000417508 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
VPS16-204ENST00000417508 AMOTQ4VCS5 1084 aa25.12■■□□□ 1.61
VPS16-204ENST00000417508 AMER1Q5JTC6 1135 aaPredicted RBP25.12■■□□□ 1.61
VPS16-204ENST00000417508 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
VPS16-204ENST00000417508 YY1P25490 414 aa25.11■■□□□ 1.61
VPS16-204ENST00000417508 COL23A1Q86Y22 540 aaPredicted RBP25.11■■□□□ 1.61
VPS16-204ENST00000417508 MSH5O43196 834 aa25.1■■□□□ 1.61
VPS16-204ENST00000417508 C5P01031 1676 aa25.1■■□□□ 1.61
VPS16-204ENST00000417508 TAF1LQ8IZX4 1826 aa25.09■■□□□ 1.61
VPS16-204ENST00000417508 ERVV-2B6SEH9 535 aa25.09■■□□□ 1.61
VPS16-204ENST00000417508 PER1O15534 1290 aaPredicted RBP25.08■■□□□ 1.61
VPS16-204ENST00000417508 DCAF5Q96JK2 942 aa25.08■■□□□ 1.61
VPS16-204ENST00000417508 LOC102724428A0A0B4J2F2 783 aa25.07■■□□□ 1.6
VPS16-204ENST00000417508 SIK1P57059 783 aa25.07■■□□□ 1.6
VPS16-204ENST00000417508 IL13P35225 146 aa25.05■■□□□ 1.6
VPS16-204ENST00000417508 AK7Q96M32 723 aa25.05■■□□□ 1.6
VPS16-204ENST00000417508 ASAP1Q9ULH1 1129 aa25.05■■□□□ 1.6
VPS16-204ENST00000417508 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
VPS16-204ENST00000417508 ZNF530Q6P9A1 599 aaPredicted RBP25.03■■□□□ 1.6
VPS16-204ENST00000417508 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
VPS16-204ENST00000417508 MTHFSP49914 203 aa25.02■■□□□ 1.6
VPS16-204ENST00000417508 C4BP0C0L5 1744 aa25.02■■□□□ 1.6
VPS16-204ENST00000417508 KDRP35968 1356 aa25.02■■□□□ 1.6
VPS16-204ENST00000417508 ATP6V1AP38606 617 aa25.01■■□□□ 1.59
VPS16-204ENST00000417508 C1orf141Q5JVX7 400 aa25.01■■□□□ 1.59
VPS16-204ENST00000417508 AEBP1Q8IUX7 1158 aa25■■□□□ 1.59
VPS16-204ENST00000417508 SSFA2P28290 1259 aa24.99■■□□□ 1.59
VPS16-204ENST00000417508 KLHL34Q8N239 644 aa24.99■■□□□ 1.59
VPS16-204ENST00000417508 NPC1L1Q9UHC9 1359 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms