RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 WDR17Q8IZU2 1322 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 TTC21AQ8NDW8 1320 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 ARHGEF25Q86VW2 580 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 NME9Q86XW9 330 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 LTV1Q96GA3 475 aaPredicted RBP9.83□□□□□ -0.84
COPS3-202ENST00000417352 SLC12A5Q9H2X9 1139 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
COPS3-202ENST00000417352 OVOS2A0A0G2JMS6 1433 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 OVOS2A0A0J9YW53 1432 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 OVOS2Q6IE36 1432 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 LRP5O75197 1615 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 SEC24BO95487 1268 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 POTEGQ6S5H5 508 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 PTF1AQ7RTS3 328 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 MARCH10Q8NA82 808 aaPredicted RBP9.82□□□□□ -0.84
COPS3-202ENST00000417352 ACSBG1Q96GR2 724 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
COPS3-202ENST00000417352 PARD3Q8TEW0 1356 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 AKAP12Q02952 1782 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
COPS3-202ENST00000417352 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
COPS3-202ENST00000417352 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
COPS3-202ENST00000417352 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
COPS3-202ENST00000417352 CARD10Q9BWT7 1032 aa9.81□□□□□ -0.84
COPS3-202ENST00000417352 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
COPS3-202ENST00000417352 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
COPS3-202ENST00000417352 COLQQ9Y215 455 aaPredicted RBP9.81□□□□□ -0.84
COPS3-202ENST00000417352 SLIT3O75094 1523 aa9.8□□□□□ -0.84
COPS3-202ENST00000417352 KCNQ2O43526 872 aa9.79□□□□□ -0.84
COPS3-202ENST00000417352 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
COPS3-202ENST00000417352 ANKRD24Q8TF21 1146 aa9.79□□□□□ -0.84
COPS3-202ENST00000417352 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
COPS3-202ENST00000417352 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 COL18A1P39060 1754 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 SBF2Q86WG5 1849 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 ST20-MTHFSA0A0A6YYL1 179 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 PLSCR1O15162 318 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 ZBTB7AO95365 584 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 IL2RBP14784 551 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 AMPHP49418 695 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 SYTL4Q96C24 671 aaPredicted RBP9.78□□□□□ -0.84
COPS3-202ENST00000417352 STK32BQ9NY57 414 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 LTN1O94822 1766 aa9.78□□□□□ -0.84
COPS3-202ENST00000417352 RREB1Q92766 1687 aa9.77□□□□□ -0.84
COPS3-202ENST00000417352 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
COPS3-202ENST00000417352 IER5LQ5T953 404 aa9.77□□□□□ -0.85
COPS3-202ENST00000417352 COG3Q96JB2 828 aa9.77□□□□□ -0.85
COPS3-202ENST00000417352 CCDC7Q96M83 1385 aa9.76□□□□□ -0.85
COPS3-202ENST00000417352 MON2Q7Z3U7 1717 aa9.76□□□□□ -0.85
COPS3-202ENST00000417352 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
COPS3-202ENST00000417352 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
COPS3-202ENST00000417352 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
COPS3-202ENST00000417352 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
COPS3-202ENST00000417352 WNK3Q9BYP7 1800 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 FBLN1P23142 703 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 YY1P25490 414 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 POLR3GLQ9BT43 218 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 PCGF6Q9BYE7 350 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
COPS3-202ENST00000417352 NFAT5O94916 1531 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 ERBB3P21860 1342 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 SBNO2Q9Y2G9 1366 aa9.75□□□□□ -0.85
COPS3-202ENST00000417352 EDC4Q6P2E9 1401 aaKnown RBP9.74□□□□□ -0.85
COPS3-202ENST00000417352 PEAK1Q9H792 1746 aa9.74□□□□□ -0.85
COPS3-202ENST00000417352 TMF1P82094 1093 aa9.74□□□□□ -0.85
COPS3-202ENST00000417352 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
COPS3-202ENST00000417352 PPM1GO15355 546 aaPredicted RBP9.73□□□□□ -0.85
COPS3-202ENST00000417352 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
COPS3-202ENST00000417352 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
COPS3-202ENST00000417352 IP6K1Q92551 441 aa9.73□□□□□ -0.85
COPS3-202ENST00000417352 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
COPS3-202ENST00000417352 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
COPS3-202ENST00000417352 PYGBP11216 843 aa9.72□□□□□ -0.85
COPS3-202ENST00000417352 RRS1Q15050 365 aaKnown RBP9.72□□□□□ -0.85
COPS3-202ENST00000417352 LCE2DQ5TA82 110 aaPredicted RBP9.72□□□□□ -0.85
COPS3-202ENST00000417352 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
COPS3-202ENST00000417352 HOXC9P31274 260 aa9.71□□□□□ -0.86
COPS3-202ENST00000417352 KCNQ4P56696 695 aa9.71□□□□□ -0.86
COPS3-202ENST00000417352 USHBP1Q8N6Y0 703 aa9.71□□□□□ -0.86
COPS3-202ENST00000417352 TNS2Q63HR2 1409 aa9.71□□□□□ -0.86
COPS3-202ENST00000417352 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
COPS3-202ENST00000417352 ZCRB1Q8TBF4 217 aaKnown RBP9.7□□□□□ -0.86
COPS3-202ENST00000417352 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
COPS3-202ENST00000417352 TESK2Q96S53 571 aa9.7□□□□□ -0.86
COPS3-202ENST00000417352 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
COPS3-202ENST00000417352 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
COPS3-202ENST00000417352 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
COPS3-202ENST00000417352 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
COPS3-202ENST00000417352 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 USP47Q96K76 1375 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
COPS3-202ENST00000417352 MTFR1LQ9H019 292 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
COPS3-202ENST00000417352 BTAF1O14981 1849 aa9.68□□□□□ -0.86
COPS3-202ENST00000417352 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms