RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SHANK3Q9BYB0 1731 aa21.46■■□□□ 1.03
ITGB1-204ENST00000417122 ZCRB1Q8TBF4 217 aaKnown RBP21.45■■□□□ 1.02
ITGB1-204ENST00000417122 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
ITGB1-204ENST00000417122 RAPGEF4Q8WZA2 1011 aa21.44■■□□□ 1.02
ITGB1-204ENST00000417122 KNSTRNQ9Y448 316 aa21.44■■□□□ 1.02
ITGB1-204ENST00000417122 KAT6BQ8WYB5 2073 aa21.43■■□□□ 1.02
ITGB1-204ENST00000417122 TATP17735 454 aaPredicted RBP21.42■■□□□ 1.02
ITGB1-204ENST00000417122 BTAF1O14981 1849 aa21.41■■□□□ 1.02
ITGB1-204ENST00000417122 LRP5O75197 1615 aa21.41■■□□□ 1.02
ITGB1-204ENST00000417122 PROM2Q8N271 834 aa21.41■■□□□ 1.02
ITGB1-204ENST00000417122 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
ITGB1-204ENST00000417122 TXNRD1Q16881 649 aa21.39■■□□□ 1.01
ITGB1-204ENST00000417122 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
ITGB1-204ENST00000417122 NCAPD2Q15021 1401 aa21.38■■□□□ 1.01
ITGB1-204ENST00000417122 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
ITGB1-204ENST00000417122 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
ITGB1-204ENST00000417122 EYA1Q99502 592 aa21.36■■□□□ 1.01
ITGB1-204ENST00000417122 PCDH11XQ9BZA7 1347 aa21.35■■□□□ 1.01
ITGB1-204ENST00000417122 PCDH11YQ9BZA8 1340 aa21.35■■□□□ 1.01
ITGB1-204ENST00000417122 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
ITGB1-204ENST00000417122 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
ITGB1-204ENST00000417122 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
ITGB1-204ENST00000417122 PKD1L3Q7Z443 1732 aa21.34■■□□□ 1.01
ITGB1-204ENST00000417122 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1.01
ITGB1-204ENST00000417122 CYP27B1O15528 508 aa21.3■■□□□ 1
ITGB1-204ENST00000417122 STK32BQ9NY57 414 aa21.3■■□□□ 1
ITGB1-204ENST00000417122 SPG7Q9UQ90 795 aa21.3■■□□□ 1
ITGB1-204ENST00000417122 SRCAPQ6ZRS2 3230 aa21.3■■□□□ 1
ITGB1-204ENST00000417122 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
ITGB1-204ENST00000417122 SLC15A2Q16348 729 aa21.28■■□□□ 1
ITGB1-204ENST00000417122 PAPPAQ13219 1627 aa21.27■■□□□ 1
ITGB1-204ENST00000417122 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
ITGB1-204ENST00000417122 LRRC4BQ9NT99 713 aa21.27■■□□□ 1
ITGB1-204ENST00000417122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.27■■□□□ 14e-16■□□□□ 11.1
ITGB1-204ENST00000417122 CASZ1Q86V15 1759 aa21.27■■□□□ 1
ITGB1-204ENST00000417122 LY75O60449 1722 aa21.26■□□□□ 0.99
ITGB1-204ENST00000417122 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
ITGB1-204ENST00000417122 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
ITGB1-204ENST00000417122 ITGB4P16144 1822 aa21.25■□□□□ 0.99
ITGB1-204ENST00000417122 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
ITGB1-204ENST00000417122 NKX1-1Q15270 411 aaPredicted RBP21.24■□□□□ 0.99
ITGB1-204ENST00000417122 SPON1Q9HCB6 807 aa21.24■□□□□ 0.99
ITGB1-204ENST00000417122 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
ITGB1-204ENST00000417122 MTHFSP49914 203 aa21.23■□□□□ 0.99
ITGB1-204ENST00000417122 PDGFDQ9GZP0 370 aaPredicted RBP21.23■□□□□ 0.99
ITGB1-204ENST00000417122 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
ITGB1-204ENST00000417122 IFNL2Q8IZJ0 200 aa21.22■□□□□ 0.99
ITGB1-204ENST00000417122 PHKG2P15735 406 aa21.21■□□□□ 0.99
ITGB1-204ENST00000417122 IL13P35225 146 aa21.21■□□□□ 0.99
ITGB1-204ENST00000417122 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
ITGB1-204ENST00000417122 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
ITGB1-204ENST00000417122 KCNQ4P56696 695 aa21.2■□□□□ 0.98
ITGB1-204ENST00000417122 AEBP1Q8IUX7 1158 aa21.19■□□□□ 0.98
ITGB1-204ENST00000417122 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
ITGB1-204ENST00000417122 ZBTB7AO95365 584 aa21.18■□□□□ 0.98
ITGB1-204ENST00000417122 PLEKHO1Q53GL0 409 aaPredicted RBP21.18■□□□□ 0.98
ITGB1-204ENST00000417122 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
ITGB1-204ENST00000417122 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
ITGB1-204ENST00000417122 QSER1Q2KHR3 1735 aa21.16■□□□□ 0.98
ITGB1-204ENST00000417122 KDRP35968 1356 aa21.16■□□□□ 0.98
ITGB1-204ENST00000417122 PALLDQ8WX93 1383 aa21.16■□□□□ 0.98
ITGB1-204ENST00000417122 AMOTQ4VCS5 1084 aa21.16■□□□□ 0.98
ITGB1-204ENST00000417122 PIGBQ92521 554 aa21.16■□□□□ 0.98
ITGB1-204ENST00000417122 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
ITGB1-204ENST00000417122 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
ITGB1-204ENST00000417122 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
ITGB1-204ENST00000417122 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
ITGB1-204ENST00000417122 TUBGCP6Q96RT7 1819 aa21.14■□□□□ 0.97
ITGB1-204ENST00000417122 DIAPH1O60610 1272 aaKnown RBP21.14■□□□□ 0.97
ITGB1-204ENST00000417122 HSP90AB1P08238 724 aaKnown RBP21.14■□□□□ 0.97
ITGB1-204ENST00000417122 ZNF530Q6P9A1 599 aaPredicted RBP21.14■□□□□ 0.97
ITGB1-204ENST00000417122 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
ITGB1-204ENST00000417122 C5P01031 1676 aa21.14■□□□□ 0.97
ITGB1-204ENST00000417122 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
ITGB1-204ENST00000417122 DCAF5Q96JK2 942 aa21.12■□□□□ 0.97
ITGB1-204ENST00000417122 TAF1LQ8IZX4 1826 aa21.12■□□□□ 0.97
ITGB1-204ENST00000417122 PNPLA7Q6ZV29 1317 aa21.11■□□□□ 0.97
ITGB1-204ENST00000417122 HMGB2P26583 209 aaKnown RBP21.11■□□□□ 0.97
ITGB1-204ENST00000417122 PTGER2P43116 358 aa21.11■□□□□ 0.97
ITGB1-204ENST00000417122 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
ITGB1-204ENST00000417122 HMOX1P09601 288 aa21.1■□□□□ 0.97
ITGB1-204ENST00000417122 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
ITGB1-204ENST00000417122 COL3A1P02461 1466 aaPredicted RBP21.09■□□□□ 0.97
ITGB1-204ENST00000417122 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
ITGB1-204ENST00000417122 SLC16A10Q8TF71 515 aa21.08■□□□□ 0.97
ITGB1-204ENST00000417122 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
ITGB1-204ENST00000417122 SGIP1Q9BQI5 828 aa21.07■□□□□ 0.96
ITGB1-204ENST00000417122 LOC102724428A0A0B4J2F2 783 aa21.06■□□□□ 0.96
ITGB1-204ENST00000417122 SIK1P57059 783 aa21.06■□□□□ 0.96
ITGB1-204ENST00000417122 CABP4P57796 275 aa21.06■□□□□ 0.96
ITGB1-204ENST00000417122 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
ITGB1-204ENST00000417122 C4BP0C0L5 1744 aa21.06■□□□□ 0.96
ITGB1-204ENST00000417122 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
ITGB1-204ENST00000417122 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
ITGB1-204ENST00000417122 SCN11AQ9UI33 1791 aa21.04■□□□□ 0.96
ITGB1-204ENST00000417122 MSH5O43196 834 aa21.03■□□□□ 0.96
ITGB1-204ENST00000417122 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
ITGB1-204ENST00000417122 ATP6V1AP38606 617 aa21.03■□□□□ 0.96
ITGB1-204ENST00000417122 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
ITGB1-204ENST00000417122 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms