RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
PDLIM2-208ENST00000416159 BTAF1O14981 1849 aa24.3■■□□□ 1.48
PDLIM2-208ENST00000416159 MEGF6O75095 1541 aa24.3■■□□□ 1.48
PDLIM2-208ENST00000416159 PPP1R1BQ9UD71 204 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-208ENST00000416159 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
PDLIM2-208ENST00000416159 TATP17735 454 aaPredicted RBP24.28■■□□□ 1.48
PDLIM2-208ENST00000416159 PRIM1P49642 420 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-208ENST00000416159 SYTL4Q96C24 671 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-208ENST00000416159 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
PDLIM2-208ENST00000416159 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-208ENST00000416159 SLC27A3Q5K4L6 730 aa24.24■■□□□ 1.47
PDLIM2-208ENST00000416159 PDGFDQ9GZP0 370 aaPredicted RBP24.24■■□□□ 1.47
PDLIM2-208ENST00000416159 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
PDLIM2-208ENST00000416159 SHANK3Q9BYB0 1731 aa24.24■■□□□ 1.47
PDLIM2-208ENST00000416159 MAP2P11137 1827 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-208ENST00000416159 ZBTB7AO95365 584 aa24.22■■□□□ 1.47
PDLIM2-208ENST00000416159 PANK3Q9H999 370 aa24.22■■□□□ 1.47
PDLIM2-208ENST00000416159 LRRC4BQ9NT99 713 aa24.22■■□□□ 1.47
PDLIM2-208ENST00000416159 POLKQ9UBT6 870 aa24.21■■□□□ 1.47
PDLIM2-208ENST00000416159 PCDH11XQ9BZA7 1347 aa24.2■■□□□ 1.46
PDLIM2-208ENST00000416159 PCDH11YQ9BZA8 1340 aa24.2■■□□□ 1.46
PDLIM2-208ENST00000416159 DOT1LQ8TEK3 1739 aa24.2■■□□□ 1.46
PDLIM2-208ENST00000416159 ATF5Q9Y2D1 282 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-208ENST00000416159 PAPPAQ13219 1627 aa24.19■■□□□ 1.46
PDLIM2-208ENST00000416159 ANKRD26Q9UPS8 1709 aa24.18■■□□□ 1.46
PDLIM2-208ENST00000416159 MTFR1LQ9H019 292 aa24.18■■□□□ 1.46
PDLIM2-208ENST00000416159 NSD2O96028 1365 aa24.17■■□□□ 1.46
PDLIM2-208ENST00000416159 ZNF827Q17R98 1081 aa24.17■■□□□ 1.46
PDLIM2-208ENST00000416159 PTGER2P43116 358 aa24.16■■□□□ 1.46
PDLIM2-208ENST00000416159 TNNT2P45379 298 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-208ENST00000416159 EYA1Q99502 592 aa24.16■■□□□ 1.46
PDLIM2-208ENST00000416159 NCAPD2Q15021 1401 aa24.16■■□□□ 1.46
PDLIM2-208ENST00000416159 AKT1S1Q96B36 256 aa24.15■■□□□ 1.46
PDLIM2-208ENST00000416159 CYP27B1O15528 508 aa24.14■■□□□ 1.45
PDLIM2-208ENST00000416159 SPG7Q9UQ90 795 aa24.13■■□□□ 1.45
PDLIM2-208ENST00000416159 LY75O60449 1722 aa24.13■■□□□ 1.45
PDLIM2-208ENST00000416159 DCAF8L1A6NGE4 600 aa24.12■■□□□ 1.45
PDLIM2-208ENST00000416159 CCNL1Q9UK58 526 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-208ENST00000416159 KCNQ4P56696 695 aa24.11■■□□□ 1.45
PDLIM2-208ENST00000416159 EIF4A2Q14240 407 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-208ENST00000416159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.11■■□□□ 1.45
PDLIM2-208ENST00000416159 HMGB2P26583 209 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-208ENST00000416159 SLC16A10Q8TF71 515 aa24.1■■□□□ 1.45
PDLIM2-208ENST00000416159 SGIP1Q9BQI5 828 aa24.1■■□□□ 1.45
PDLIM2-208ENST00000416159 KNSTRNQ9Y448 316 aa24.1■■□□□ 1.45
PDLIM2-208ENST00000416159 PKD1L3Q7Z443 1732 aa24.1■■□□□ 1.45
PDLIM2-208ENST00000416159 NKX1-1Q15270 411 aaPredicted RBP24.09■■□□□ 1.45
PDLIM2-208ENST00000416159 MORC1Q86VD1 984 aa24.09■■□□□ 1.45
PDLIM2-208ENST00000416159 TFCP2L1Q9NZI6 479 aa24.09■■□□□ 1.45
PDLIM2-208ENST00000416159 MPRIPQ6WCQ1 1025 aa24.08■■□□□ 1.45
PDLIM2-208ENST00000416159 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
PDLIM2-208ENST00000416159 SMARCC1Q92922 1105 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-208ENST00000416159 PNPLA7Q6ZV29 1317 aa24.06■■□□□ 1.44
PDLIM2-208ENST00000416159 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
PDLIM2-208ENST00000416159 ARXQ96QS3 562 aa24.05■■□□□ 1.44
PDLIM2-208ENST00000416159 PLEKHG2Q9H7P9 1386 aa24.04■■□□□ 1.44
PDLIM2-208ENST00000416159 SYT17Q9BSW7 474 aa24.04■■□□□ 1.44
PDLIM2-208ENST00000416159 FHDC1Q9C0D6 1143 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-208ENST00000416159 KIF7Q2M1P5 1343 aa24.04■■□□□ 1.44
PDLIM2-208ENST00000416159 PALLDQ8WX93 1383 aa24.03■■□□□ 1.44
PDLIM2-208ENST00000416159 ITGB4P16144 1822 aa24.03■■□□□ 1.44
PDLIM2-208ENST00000416159 IGSF1Q8N6C5 1336 aa24.03■■□□□ 1.44
PDLIM2-208ENST00000416159 PHKG2P15735 406 aa24.02■■□□□ 1.44
PDLIM2-208ENST00000416159 PIGBQ92521 554 aa24.02■■□□□ 1.44
PDLIM2-208ENST00000416159 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
PDLIM2-208ENST00000416159 POLD1P28340 1107 aa24■■□□□ 1.43
PDLIM2-208ENST00000416159 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
PDLIM2-208ENST00000416159 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-208ENST00000416159 PLEKHO1Q53GL0 409 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-208ENST00000416159 TMOD3Q9NYL9 352 aa23.98■■□□□ 1.43
PDLIM2-208ENST00000416159 COL23A1Q86Y22 540 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-208ENST00000416159 FLAD1Q8NFF5 587 aa23.97■■□□□ 1.43
PDLIM2-208ENST00000416159 MAP3K5Q99683 1374 aa23.97■■□□□ 1.43
PDLIM2-208ENST00000416159 MSH5O43196 834 aa23.96■■□□□ 1.43
PDLIM2-208ENST00000416159 YY1P25490 414 aa23.96■■□□□ 1.43
PDLIM2-208ENST00000416159 C5P01031 1676 aa23.95■■□□□ 1.43
PDLIM2-208ENST00000416159 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-208ENST00000416159 AMOTQ4VCS5 1084 aa23.95■■□□□ 1.42
PDLIM2-208ENST00000416159 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.42
PDLIM2-208ENST00000416159 COL24A1Q17RW2 1714 aa23.95■■□□□ 1.42
PDLIM2-208ENST00000416159 PER1O15534 1290 aaPredicted RBP23.93■■□□□ 1.42
PDLIM2-208ENST00000416159 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
PDLIM2-208ENST00000416159 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
PDLIM2-208ENST00000416159 IL13P35225 146 aa23.92■■□□□ 1.42
PDLIM2-208ENST00000416159 SIK1P57059 783 aa23.92■■□□□ 1.42
PDLIM2-208ENST00000416159 ZNF530Q6P9A1 599 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-208ENST00000416159 DCAF5Q96JK2 942 aa23.91■■□□□ 1.42
PDLIM2-208ENST00000416159 AK7Q96M32 723 aa23.91■■□□□ 1.42
PDLIM2-208ENST00000416159 ASAP1Q9ULH1 1129 aa23.91■■□□□ 1.42
PDLIM2-208ENST00000416159 SULT6B1Q6IMI4 303 aa23.9■■□□□ 1.42
PDLIM2-208ENST00000416159 AEBP1Q8IUX7 1158 aa23.9■■□□□ 1.42
PDLIM2-208ENST00000416159 MTHFSP49914 203 aa23.89■■□□□ 1.41
PDLIM2-208ENST00000416159 KLHL34Q8N239 644 aa23.89■■□□□ 1.41
PDLIM2-208ENST00000416159 ATG3Q9NT62 314 aa23.89■■□□□ 1.41
PDLIM2-208ENST00000416159 C4BP0C0L5 1744 aa23.89■■□□□ 1.41
PDLIM2-208ENST00000416159 ATP6V1AP38606 617 aa23.87■■□□□ 1.41
PDLIM2-208ENST00000416159 C1orf141Q5JVX7 400 aa23.87■■□□□ 1.41
PDLIM2-208ENST00000416159 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-208ENST00000416159 KDRP35968 1356 aa23.87■■□□□ 1.41
PDLIM2-208ENST00000416159 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms