RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ZC3H15Q8WU90 426 aaKnown RBP5.7□□□□□ -1.5
APP-207ENST00000415997 FHOD3Q2V2M9 1422 aa5.7□□□□□ -1.5
APP-207ENST00000415997 TTBK1Q5TCY1 1321 aaPredicted RBP5.7□□□□□ -1.5
APP-207ENST00000415997 ABCA9Q8IUA7 1624 aa5.7□□□□□ -1.5
APP-207ENST00000415997 ZMYM4Q5VZL5 1548 aa5.69□□□□□ -1.5
APP-207ENST00000415997 BMP2P12643 396 aa5.69□□□□□ -1.5
APP-207ENST00000415997 AMHR2Q16671 573 aa5.69□□□□□ -1.5
APP-207ENST00000415997 RIC3Q7Z5B4 369 aa5.69□□□□□ -1.5
APP-207ENST00000415997 ITPKCQ96DU7 683 aa5.69□□□□□ -1.5
APP-207ENST00000415997 ZBTB3Q9H5J0 574 aa5.69□□□□□ -1.5
APP-207ENST00000415997 IGF1RP08069 1367 aa5.68□□□□□ -1.5
APP-207ENST00000415997 RICTORQ6R327 1708 aa5.68□□□□□ -1.5
APP-207ENST00000415997 AKNAQ7Z591 1439 aa5.68□□□□□ -1.5
APP-207ENST00000415997 PER1O15534 1290 aaPredicted RBP5.68□□□□□ -1.5
APP-207ENST00000415997 UPP2O95045 317 aa5.68□□□□□ -1.5
APP-207ENST00000415997 NR3C2P08235 984 aa5.68□□□□□ -1.5
APP-207ENST00000415997 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
APP-207ENST00000415997 DIXDC1Q155Q3 683 aa5.68□□□□□ -1.5
APP-207ENST00000415997 POTEAQ6S8J7 498 aa5.68□□□□□ -1.5
APP-207ENST00000415997 MPNDQ8N594 471 aa5.68□□□□□ -1.5
APP-207ENST00000415997 IQGAP2Q13576 1575 aa5.67□□□□□ -1.5
APP-207ENST00000415997 SETD1BQ9UPS6 1966 aaKnown RBP5.67□□□□□ -1.5
APP-207ENST00000415997 SPTLC1O15269 473 aa5.67□□□□□ -1.5
APP-207ENST00000415997 CEBPAP49715 358 aaPredicted RBP5.67□□□□□ -1.5
APP-207ENST00000415997 PARP9Q8IXQ6 854 aa5.67□□□□□ -1.5
APP-207ENST00000415997 KLF16Q9BXK1 252 aaPredicted RBP5.67□□□□□ -1.5
APP-207ENST00000415997 UGGT2Q9NYU1 1516 aa5.67□□□□□ -1.5
APP-207ENST00000415997 MAGI2Q86UL8 1455 aa5.66□□□□□ -1.5
APP-207ENST00000415997 MAGEB6P1A0A0J9YX57 407 aa5.66□□□□□ -1.5
APP-207ENST00000415997 NR5A1Q13285 461 aa5.66□□□□□ -1.5
APP-207ENST00000415997 C4orf48Q5BLP8 95 aa5.66□□□□□ -1.5
APP-207ENST00000415997 BPHLQ86WA6 291 aaPredicted RBP5.66□□□□□ -1.5
APP-207ENST00000415997 CDK15Q96Q40 435 aa5.66□□□□□ -1.5
APP-207ENST00000415997 ABCA8O94911 1581 aa5.66□□□□□ -1.5
APP-207ENST00000415997 ZFYVE16Q7Z3T8 1539 aa5.65□□□□□ -1.5
APP-207ENST00000415997 TRIM66O15016 1216 aa5.65□□□□□ -1.5
APP-207ENST00000415997 F12P00748 615 aaPredicted RBP5.65□□□□□ -1.5
APP-207ENST00000415997 GJA5P36382 358 aa5.65□□□□□ -1.5
APP-207ENST00000415997 GRM5P41594 1212 aa5.65□□□□□ -1.5
APP-207ENST00000415997 CARD14Q9BXL6 1004 aa5.65□□□□□ -1.5
APP-207ENST00000415997 KIAA0556O60303 1618 aa5.65□□□□□ -1.51
APP-207ENST00000415997 SETD1AO15047 1707 aaKnown RBP5.65□□□□□ -1.51
APP-207ENST00000415997 DENND4BO75064 1496 aaPredicted RBP5.64□□□□□ -1.51
APP-207ENST00000415997 FIGNL2A6NMB9 653 aa5.64□□□□□ -1.51
APP-207ENST00000415997 TOM1O60784 492 aa5.64□□□□□ -1.51
APP-207ENST00000415997 PPFIA3O75145 1194 aa5.64□□□□□ -1.51
APP-207ENST00000415997 FSHRP23945 695 aa5.64□□□□□ -1.51
APP-207ENST00000415997 QPCTQ16769 361 aa5.64□□□□□ -1.51
APP-207ENST00000415997 VASH1Q7L8A9 365 aaPredicted RBP5.64□□□□□ -1.51
APP-207ENST00000415997 LINC00528Q8N1L1 170 aa5.64□□□□□ -1.51
APP-207ENST00000415997 LIMD1Q9UGP4 676 aa5.64□□□□□ -1.51
APP-207ENST00000415997 TCOF1Q13428 1488 aaKnown RBP5.64□□□□□ -1.51
APP-207ENST00000415997 EFCAB5A4FU69 1503 aa5.64□□□□□ -1.51
APP-207ENST00000415997 CAMSAP1Q5T5Y3 1602 aa5.63□□□□□ -1.51
APP-207ENST00000415997 PIP4K2BP78356 416 aa5.63□□□□□ -1.51
APP-207ENST00000415997 PRPF38BQ5VTL8 546 aaKnown RBP5.63□□□□□ -1.51
APP-207ENST00000415997 AK7Q96M32 723 aa5.63□□□□□ -1.51
APP-207ENST00000415997 ATP1B4Q9UN42 357 aaPredicted RBP5.63□□□□□ -1.51
APP-207ENST00000415997 TRAPPC8Q9Y2L5 1435 aa5.63□□□□□ -1.51
APP-207ENST00000415997 ARMC2Q8NEN0 867 aa5.62□□□□□ -1.51
APP-207ENST00000415997 PLA2R1Q13018 1463 aa5.62□□□□□ -1.51
APP-207ENST00000415997 CPS1P31327 1500 aa5.61□□□□□ -1.51
APP-207ENST00000415997 MLECQ14165 292 aa5.61□□□□□ -1.51
APP-207ENST00000415997 PTPRKQ15262 1439 aa5.61□□□□□ -1.51
APP-207ENST00000415997 RTL5Q5HYW3 569 aaPredicted RBP5.61□□□□□ -1.51
APP-207ENST00000415997 MYSM1Q5VVJ2 828 aa5.61□□□□□ -1.51
APP-207ENST00000415997 MEIOBQ8N635 442 aa5.61□□□□□ -1.51
APP-207ENST00000415997 HELBQ8NG08 1087 aaPredicted RBP5.61□□□□□ -1.51
APP-207ENST00000415997 POLR3EQ9NVU0 708 aa5.61□□□□□ -1.51
APP-207ENST00000415997 DNMT3LQ9UJW3 386 aa5.61□□□□□ -1.51
APP-207ENST00000415997 RAPGEF2Q9Y4G8 1499 aa5.61□□□□□ -1.51
APP-207ENST00000415997 C3P01024 1663 aa5.6□□□□□ -1.51
APP-207ENST00000415997 HECW1Q76N89 1606 aa5.6□□□□□ -1.51
APP-207ENST00000415997 ATP10AO60312 1499 aa5.6□□□□□ -1.51
APP-207ENST00000415997 SOS2Q07890 1332 aaPredicted RBP5.6□□□□□ -1.51
APP-207ENST00000415997 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
APP-207ENST00000415997 CCDC116Q8IYX3 515 aa5.6□□□□□ -1.51
APP-207ENST00000415997 CNTNAP3BQ96NU0 1288 aa5.6□□□□□ -1.51
APP-207ENST00000415997 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
APP-207ENST00000415997 CNTNAP3Q9BZ76 1288 aa5.6□□□□□ -1.51
APP-207ENST00000415997 ATP10BO94823 1461 aa5.59□□□□□ -1.51
APP-207ENST00000415997 C9orf84Q5VXU9 1444 aa5.59□□□□□ -1.51
APP-207ENST00000415997 TTLL8A6PVC2 850 aa5.59□□□□□ -1.51
APP-207ENST00000415997 LILRB3O75022 631 aa5.59□□□□□ -1.51
APP-207ENST00000415997 VSIG8P0DPA2 414 aa5.59□□□□□ -1.51
APP-207ENST00000415997 PDE4DQ08499 809 aa5.59□□□□□ -1.51
APP-207ENST00000415997 CBLBQ13191 982 aa5.59□□□□□ -1.51
APP-207ENST00000415997 KCTD17Q8N5Z5 321 aa5.59□□□□□ -1.51
APP-207ENST00000415997 GPR161Q8N6U8 529 aaKnown RBP5.59□□□□□ -1.51
APP-207ENST00000415997 EMILIN1Q9Y6C2 1016 aa5.59□□□□□ -1.51
APP-207ENST00000415997 CARMIL1Q5VZK9 1371 aa5.58□□□□□ -1.52
APP-207ENST00000415997 PTSQ03393 145 aa5.58□□□□□ -1.52
APP-207ENST00000415997 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.58□□□□□ -1.523e-9■■■□□ 17.3
APP-207ENST00000415997 SHANK2Q9UPX8 1470 aa5.58□□□□□ -1.52
APP-207ENST00000415997 NPATQ14207 1427 aa5.57□□□□□ -1.52
APP-207ENST00000415997 CTDSPL2Q05D32 466 aa5.57□□□□□ -1.52
APP-207ENST00000415997 PPP1R26Q5T8A7 1209 aaPredicted RBP5.57□□□□□ -1.52
APP-207ENST00000415997 SH3BP5LQ7L8J4 393 aa5.57□□□□□ -1.52
APP-207ENST00000415997 SH3RF1Q7Z6J0 888 aa5.57□□□□□ -1.52
APP-207ENST00000415997 C1QTNF2Q9BXJ5 285 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms