RNA–Protein interactions for RNA: ENST00000415557.1

ACTA2-202, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 3

Gene ACTA2, Length 878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-202ENST00000415557 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.85
ACTA2-202ENST00000415557 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
ACTA2-202ENST00000415557 CDCA7Q9BWT1 371 aaPredicted RBP20.33■□□□□ 0.85
ACTA2-202ENST00000415557 MEGF6O75095 1541 aa20.32■□□□□ 0.84
ACTA2-202ENST00000415557 RXRBP28702 533 aa20.32■□□□□ 0.84
ACTA2-202ENST00000415557 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
ACTA2-202ENST00000415557 WNK3Q9BYP7 1800 aa20.32■□□□□ 0.84
ACTA2-202ENST00000415557 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
ACTA2-202ENST00000415557 PARP4Q9UKK3 1724 aaKnown RBP20.31■□□□□ 0.84
ACTA2-202ENST00000415557 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
ACTA2-202ENST00000415557 A0A0G2JS52 829 aa20.31■□□□□ 0.84
ACTA2-202ENST00000415557 MYT1Q01538 1121 aa20.31■□□□□ 0.84
ACTA2-202ENST00000415557 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
ACTA2-202ENST00000415557 SPG7Q9UQ90 795 aa20.3■□□□□ 0.84
ACTA2-202ENST00000415557 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
ACTA2-202ENST00000415557 EXOC5O00471 708 aa20.29■□□□□ 0.84
ACTA2-202ENST00000415557 ONECUT3O60422 494 aaPredicted RBP20.29■□□□□ 0.84
ACTA2-202ENST00000415557 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
ACTA2-202ENST00000415557 DDB1Q16531 1140 aa20.28■□□□□ 0.84
ACTA2-202ENST00000415557 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
ACTA2-202ENST00000415557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
ACTA2-202ENST00000415557 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
ACTA2-202ENST00000415557 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
ACTA2-202ENST00000415557 APAF1O14727 1248 aa20.26■□□□□ 0.83
ACTA2-202ENST00000415557 ZNF530Q6P9A1 599 aaPredicted RBP20.26■□□□□ 0.83
ACTA2-202ENST00000415557 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
ACTA2-202ENST00000415557 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
ACTA2-202ENST00000415557 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
ACTA2-202ENST00000415557 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
ACTA2-202ENST00000415557 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
ACTA2-202ENST00000415557 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
ACTA2-202ENST00000415557 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
ACTA2-202ENST00000415557 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
ACTA2-202ENST00000415557 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
ACTA2-202ENST00000415557 PDE3BQ13370 1112 aa20.23■□□□□ 0.83
ACTA2-202ENST00000415557 PCDH11XQ9BZA7 1347 aa20.23■□□□□ 0.83
ACTA2-202ENST00000415557 PCDH11YQ9BZA8 1340 aa20.23■□□□□ 0.83
ACTA2-202ENST00000415557 TNS2Q63HR2 1409 aa20.22■□□□□ 0.83
ACTA2-202ENST00000415557 CYP27B1O15528 508 aa20.22■□□□□ 0.83
ACTA2-202ENST00000415557 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
ACTA2-202ENST00000415557 IFNL2Q8IZJ0 200 aa20.22■□□□□ 0.83
ACTA2-202ENST00000415557 UPF1Q92900 1129 aaKnown RBP eCLIP20.22■□□□□ 0.83
ACTA2-202ENST00000415557 LRRC37A3O60309 1634 aa20.22■□□□□ 0.83
ACTA2-202ENST00000415557 PHKG2P15735 406 aa20.21■□□□□ 0.83
ACTA2-202ENST00000415557 RIPK4P57078 832 aa20.21■□□□□ 0.83
ACTA2-202ENST00000415557 SHANK3Q9BYB0 1731 aa20.21■□□□□ 0.83
ACTA2-202ENST00000415557 DLG5Q8TDM6 1919 aa20.2■□□□□ 0.82
ACTA2-202ENST00000415557 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
ACTA2-202ENST00000415557 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
ACTA2-202ENST00000415557 BRWD3Q6RI45 1802 aa20.19■□□□□ 0.82
ACTA2-202ENST00000415557 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
ACTA2-202ENST00000415557 MARCH10Q8NA82 808 aaPredicted RBP20.19■□□□□ 0.82
ACTA2-202ENST00000415557 MAP3K5Q99683 1374 aa20.18■□□□□ 0.82
ACTA2-202ENST00000415557 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
ACTA2-202ENST00000415557 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
ACTA2-202ENST00000415557 RGS12O14924 1447 aa20.17■□□□□ 0.82
ACTA2-202ENST00000415557 HSP90AB1P08238 724 aaKnown RBP20.16■□□□□ 0.82
ACTA2-202ENST00000415557 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
ACTA2-202ENST00000415557 KRT27Q7Z3Y8 459 aa20.16■□□□□ 0.82
ACTA2-202ENST00000415557 HTATSF1O43719 755 aaKnown RBP20.15■□□□□ 0.82
ACTA2-202ENST00000415557 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
ACTA2-202ENST00000415557 NKX1-1Q15270 411 aaPredicted RBP20.15■□□□□ 0.82
ACTA2-202ENST00000415557 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
ACTA2-202ENST00000415557 DCTN1Q14203 1278 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 FAM182BQ5T319 152 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 MCM10Q7L590 875 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 LGR6Q9HBX8 967 aa20.14■□□□□ 0.81
ACTA2-202ENST00000415557 RNMTO43148 476 aaKnown RBP20.13■□□□□ 0.81
ACTA2-202ENST00000415557 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
ACTA2-202ENST00000415557 IL17REQ8NFR9 667 aa20.13■□□□□ 0.81
ACTA2-202ENST00000415557 KAT6BQ8WYB5 2073 aa20.12■□□□□ 0.81
ACTA2-202ENST00000415557 VIRMAQ69YN4 1812 aaKnown RBP20.12■□□□□ 0.81
ACTA2-202ENST00000415557 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
ACTA2-202ENST00000415557 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
ACTA2-202ENST00000415557 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
ACTA2-202ENST00000415557 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
ACTA2-202ENST00000415557 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
ACTA2-202ENST00000415557 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
ACTA2-202ENST00000415557 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
ACTA2-202ENST00000415557 TEFQ10587 303 aa20.08■□□□□ 0.81
ACTA2-202ENST00000415557 FAM196AQ6ZSG2 479 aa20.08■□□□□ 0.81
ACTA2-202ENST00000415557 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
ACTA2-202ENST00000415557 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
ACTA2-202ENST00000415557 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
ACTA2-202ENST00000415557 CABP4P57796 275 aa20.07■□□□□ 0.8
ACTA2-202ENST00000415557 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
ACTA2-202ENST00000415557 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
ACTA2-202ENST00000415557 SYTL4Q96C24 671 aaPredicted RBP20.06■□□□□ 0.8
ACTA2-202ENST00000415557 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
ACTA2-202ENST00000415557 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
ACTA2-202ENST00000415557 CALD1Q05682 793 aaKnown RBP20.05■□□□□ 0.8
ACTA2-202ENST00000415557 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
ACTA2-202ENST00000415557 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
ACTA2-202ENST00000415557 ITGB4P16144 1822 aa20.04■□□□□ 0.8
ACTA2-202ENST00000415557 BCL9O00512 1426 aa20.04■□□□□ 0.8
ACTA2-202ENST00000415557 TAF7Q15545 349 aaPredicted RBP20.04■□□□□ 0.8
ACTA2-202ENST00000415557 TMOD3Q9NYL9 352 aa20.04■□□□□ 0.8
ACTA2-202ENST00000415557 LAS1LQ9Y4W2 734 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms