RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 MCM10Q7L590 875 aa12.83□□□□□ -0.36
PTPN12-203ENST00000415482 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
PTPN12-203ENST00000415482 CRB1P82279 1406 aa12.83□□□□□ -0.36
PTPN12-203ENST00000415482 SLIT2O94813 1529 aa12.82□□□□□ -0.36
PTPN12-203ENST00000415482 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
PTPN12-203ENST00000415482 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
PTPN12-203ENST00000415482 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
PTPN12-203ENST00000415482 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
PTPN12-203ENST00000415482 E9PSI1 815 aa12.81□□□□□ -0.36
PTPN12-203ENST00000415482 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
PTPN12-203ENST00000415482 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
PTPN12-203ENST00000415482 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 GNAT3A8MTJ3 354 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
PTPN12-203ENST00000415482 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
PTPN12-203ENST00000415482 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
PTPN12-203ENST00000415482 IL16Q14005 1332 aa12.79□□□□□ -0.36
PTPN12-203ENST00000415482 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
PTPN12-203ENST00000415482 IL17REQ8NFR9 667 aa12.79□□□□□ -0.36
PTPN12-203ENST00000415482 IL2RBP14784 551 aa12.78□□□□□ -0.36
PTPN12-203ENST00000415482 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
PTPN12-203ENST00000415482 RTF1Q92541 710 aaKnown RBP12.78□□□□□ -0.36
PTPN12-203ENST00000415482 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
PTPN12-203ENST00000415482 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
PTPN12-203ENST00000415482 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
PTPN12-203ENST00000415482 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
PTPN12-203ENST00000415482 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
PTPN12-203ENST00000415482 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.36
PTPN12-203ENST00000415482 ZNF853P0CG23 659 aa12.77□□□□□ -0.36
PTPN12-203ENST00000415482 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.36
PTPN12-203ENST00000415482 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.36
PTPN12-203ENST00000415482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.362e-7■■■■□ 19.9
PTPN12-203ENST00000415482 SPG7Q9UQ90 795 aa12.77□□□□□ -0.36
PTPN12-203ENST00000415482 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 CYP27B1O15528 508 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 MEX3CQ5U5Q3 659 aaKnown RBP12.77□□□□□ -0.37
PTPN12-203ENST00000415482 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 WNK3Q9BYP7 1800 aa12.77□□□□□ -0.37
PTPN12-203ENST00000415482 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 PHKG2P15735 406 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
PTPN12-203ENST00000415482 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
PTPN12-203ENST00000415482 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
PTPN12-203ENST00000415482 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
PTPN12-203ENST00000415482 CEMIPQ8WUJ3 1361 aa12.75□□□□□ -0.37
PTPN12-203ENST00000415482 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
PTPN12-203ENST00000415482 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
PTPN12-203ENST00000415482 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
PTPN12-203ENST00000415482 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
PTPN12-203ENST00000415482 GNAI1P63096 354 aa12.74□□□□□ -0.37
PTPN12-203ENST00000415482 USP21Q9UK80 565 aa12.74□□□□□ -0.37
PTPN12-203ENST00000415482 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
PTPN12-203ENST00000415482 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
PTPN12-203ENST00000415482 CHL1O00533 1208 aa12.74□□□□□ -0.37
PTPN12-203ENST00000415482 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
PTPN12-203ENST00000415482 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
PTPN12-203ENST00000415482 AFF2P51816 1311 aa12.74□□□□□ -0.37
PTPN12-203ENST00000415482 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
PTPN12-203ENST00000415482 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
PTPN12-203ENST00000415482 VPS72Q15906 364 aa12.73□□□□□ -0.37
PTPN12-203ENST00000415482 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
PTPN12-203ENST00000415482 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
PTPN12-203ENST00000415482 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
PTPN12-203ENST00000415482 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
PTPN12-203ENST00000415482 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
PTPN12-203ENST00000415482 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
PTPN12-203ENST00000415482 THRAP3Q9Y2W1 955 aaKnown RBP12.72□□□□□ -0.37
PTPN12-203ENST00000415482 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
PTPN12-203ENST00000415482 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.38
PTPN12-203ENST00000415482 KRT24Q2M2I5 525 aa12.71□□□□□ -0.38
PTPN12-203ENST00000415482 BARGINQ6ZT62 677 aa12.71□□□□□ -0.38
PTPN12-203ENST00000415482 TSPYL6Q8N831 410 aa12.71□□□□□ -0.38
PTPN12-203ENST00000415482 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
PTPN12-203ENST00000415482 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
PTPN12-203ENST00000415482 TEFQ10587 303 aa12.7□□□□□ -0.38
PTPN12-203ENST00000415482 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
PTPN12-203ENST00000415482 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
PTPN12-203ENST00000415482 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
PTPN12-203ENST00000415482 GLI3P10071 1580 aa12.69□□□□□ -0.38
PTPN12-203ENST00000415482 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
PTPN12-203ENST00000415482 EXOC5O00471 708 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 ELL2O00472 640 aaPredicted RBP12.68□□□□□ -0.38
PTPN12-203ENST00000415482 KCNQ3O43525 872 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
PTPN12-203ENST00000415482 ATRNO75882 1429 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 TNS2Q63HR2 1409 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 BCAR3O75815 825 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
PTPN12-203ENST00000415482 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
PTPN12-203ENST00000415482 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms