RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 SIX5Q8N196 739 aa11.46□□□□□ -0.57
LINC00343-202ENST00000415294 KCTD15Q96SI1 283 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-202ENST00000415294 CLDN10P78369 228 aa11.45□□□□□ -0.58
LINC00343-202ENST00000415294 MPNDQ8N594 471 aa11.45□□□□□ -0.58
LINC00343-202ENST00000415294 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
LINC00343-202ENST00000415294 RBM19Q9Y4C8 960 aaKnown RBP11.45□□□□□ -0.58
LINC00343-202ENST00000415294 PCDHB11Q9Y5F2 797 aa11.45□□□□□ -0.58
LINC00343-202ENST00000415294 GTF2IP78347 998 aa11.44□□□□□ -0.58
LINC00343-202ENST00000415294 TSGA10IPQ3SY00 556 aa11.44□□□□□ -0.58
LINC00343-202ENST00000415294 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
LINC00343-202ENST00000415294 GNEQ9Y223 722 aaKnown RBP11.44□□□□□ -0.58
LINC00343-202ENST00000415294 NESP48681 1621 aa11.44□□□□□ -0.58
LINC00343-202ENST00000415294 SKOR1P84550 965 aa11.43□□□□□ -0.58
LINC00343-202ENST00000415294 DPYDQ12882 1025 aa11.43□□□□□ -0.58
LINC00343-202ENST00000415294 TMCO4Q5TGY1 634 aa11.43□□□□□ -0.58
LINC00343-202ENST00000415294 VASH1Q7L8A9 365 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-202ENST00000415294 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
LINC00343-202ENST00000415294 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-202ENST00000415294 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
LINC00343-202ENST00000415294 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
LINC00343-202ENST00000415294 CDK15Q96Q40 435 aa11.42□□□□□ -0.58
LINC00343-202ENST00000415294 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
LINC00343-202ENST00000415294 DHX9Q08211 1270 aaKnown RBP11.41□□□□□ -0.58
LINC00343-202ENST00000415294 FAM69CQ0P6D2 419 aa11.41□□□□□ -0.58
LINC00343-202ENST00000415294 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
LINC00343-202ENST00000415294 SEC13P55735 322 aa11.4□□□□□ -0.58
LINC00343-202ENST00000415294 ZBTB7BO15156 539 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-202ENST00000415294 SSFA2P28290 1259 aa11.39□□□□□ -0.59
LINC00343-202ENST00000415294 INTS6LQ5JSJ4 861 aaKnown RBP11.39□□□□□ -0.59
LINC00343-202ENST00000415294 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
LINC00343-202ENST00000415294 CCDC102BQ68D86 513 aa11.39□□□□□ -0.59
LINC00343-202ENST00000415294 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-202ENST00000415294 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
LINC00343-202ENST00000415294 PCDHGA11Q9Y5H2 935 aa11.39□□□□□ -0.59
LINC00343-202ENST00000415294 DKK1O94907 266 aa11.38□□□□□ -0.59
LINC00343-202ENST00000415294 SLC19A1P41440 591 aa11.38□□□□□ -0.59
LINC00343-202ENST00000415294 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
LINC00343-202ENST00000415294 M0R2N6 131 aa11.37□□□□□ -0.59
LINC00343-202ENST00000415294 PSME1Q06323 249 aa11.37□□□□□ -0.59
LINC00343-202ENST00000415294 C1orf216Q8TAB5 229 aa11.37□□□□□ -0.59
LINC00343-202ENST00000415294 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
LINC00343-202ENST00000415294 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-202ENST00000415294 TPCN2Q8NHX9 752 aa11.36□□□□□ -0.59
LINC00343-202ENST00000415294 ERVH48-1M5A8F1 160 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 WNT7AO00755 349 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 KIAA1024Q9UPX6 916 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 BAZ1AQ9NRL2 1556 aaPredicted RBP11.35□□□□□ -0.59
LINC00343-202ENST00000415294 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
LINC00343-202ENST00000415294 NR5A1Q13285 461 aa11.34□□□□□ -0.59
LINC00343-202ENST00000415294 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
LINC00343-202ENST00000415294 LIAT1Q6ZQX7 453 aa11.34□□□□□ -0.59
LINC00343-202ENST00000415294 SND1Q7KZF4 910 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00343-202ENST00000415294 MTMR7Q9Y216 660 aa11.34□□□□□ -0.59
LINC00343-202ENST00000415294 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 SIAH2O43255 324 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 ADH1CP00326 375 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 FSHRP23945 695 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 GRM5P41594 1212 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 RAB15P59190 212 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
LINC00343-202ENST00000415294 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
LINC00343-202ENST00000415294 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
LINC00343-202ENST00000415294 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
LINC00343-202ENST00000415294 LCE2BO14633 110 aa11.31□□□□□ -0.6
LINC00343-202ENST00000415294 MFAP1P55081 439 aaKnown RBP11.31□□□□□ -0.6
LINC00343-202ENST00000415294 CCDC116Q8IYX3 515 aa11.31□□□□□ -0.6
LINC00343-202ENST00000415294 SLAIN2Q9P270 581 aa11.31□□□□□ -0.6
LINC00343-202ENST00000415294 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
LINC00343-202ENST00000415294 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
LINC00343-202ENST00000415294 SFI1A8K8P3 1242 aa11.29□□□□□ -0.6
LINC00343-202ENST00000415294 SCTRP47872 440 aa11.29□□□□□ -0.6
LINC00343-202ENST00000415294 BACH1O14867 736 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 MYT1Q01538 1121 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 CYP2U1Q7Z449 544 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-202ENST00000415294 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
LINC00343-202ENST00000415294 OCLNQ16625 522 aa11.27□□□□□ -0.61
LINC00343-202ENST00000415294 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
LINC00343-202ENST00000415294 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
LINC00343-202ENST00000415294 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
LINC00343-202ENST00000415294 EMILIN1Q9Y6C2 1016 aa11.27□□□□□ -0.61
LINC00343-202ENST00000415294 PPP1R26Q5T8A7 1209 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-202ENST00000415294 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
LINC00343-202ENST00000415294 HINFPQ9BQA5 517 aa11.26□□□□□ -0.61
LINC00343-202ENST00000415294 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
LINC00343-202ENST00000415294 KIF21AQ7Z4S6 1674 aa11.26□□□□□ -0.61
LINC00343-202ENST00000415294 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
LINC00343-202ENST00000415294 GNRH1P01148 92 aa11.25□□□□□ -0.61
LINC00343-202ENST00000415294 WEE1P30291 646 aa11.25□□□□□ -0.61
LINC00343-202ENST00000415294 ZNF784Q8NCA9 323 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-202ENST00000415294 CYLDQ9NQC7 956 aa11.25□□□□□ -0.61
LINC00343-202ENST00000415294 ZNF358Q9NW07 568 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms