RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
HMGB3P23-201ENST00000414981 CDCA7Q9BWT1 371 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P23-201ENST00000414981 OSBPL3Q9H4L5 887 aa7.72□□□□□ -1.17
HMGB3P23-201ENST00000414981 NXF1Q9UBU9 619 aaKnown RBP7.72□□□□□ -1.17
HMGB3P23-201ENST00000414981 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 LZTS3O60299 673 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 GNRH1P01148 92 aa7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 CTSOP43234 321 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 CYP2U1Q7Z449 544 aa7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
HMGB3P23-201ENST00000414981 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
HMGB3P23-201ENST00000414981 RNF144AP50876 292 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P23-201ENST00000414981 HDGFL1Q5TGJ6 251 aa7.7□□□□□ -1.18
HMGB3P23-201ENST00000414981 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
HMGB3P23-201ENST00000414981 DNMT3LQ9UJW3 386 aa7.7□□□□□ -1.18
HMGB3P23-201ENST00000414981 FIGNL2A6NMB9 653 aa7.69□□□□□ -1.18
HMGB3P23-201ENST00000414981 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
HMGB3P23-201ENST00000414981 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
HMGB3P23-201ENST00000414981 GPC1P35052 558 aa7.69□□□□□ -1.18
HMGB3P23-201ENST00000414981 POLMQ9NP87 494 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P23-201ENST00000414981 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
HMGB3P23-201ENST00000414981 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P23-201ENST00000414981 SLC16A10Q8TF71 515 aa7.68□□□□□ -1.18
HMGB3P23-201ENST00000414981 WFS1O76024 890 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 CLN3Q13286 438 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 RNF217Q8TC41 542 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 ADAMTS19Q8TE59 1207 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 GTF3C3Q9Y5Q9 886 aa7.67□□□□□ -1.18
HMGB3P23-201ENST00000414981 PIK3CDO00329 1044 aa7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 SKIP12755 728 aa7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 XAGE2Q96GT9 111 aa7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 GRIP2Q9C0E4 1043 aa7.66□□□□□ -1.18
HMGB3P23-201ENST00000414981 H3BM21 787 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 MEN1O00255 615 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 PTSQ03393 145 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 LYSMD3Q7Z3D4 306 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 ESYT1Q9BSJ8 1104 aa7.65□□□□□ -1.18
HMGB3P23-201ENST00000414981 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
HMGB3P23-201ENST00000414981 EML3Q32P44 896 aa7.64□□□□□ -1.19
HMGB3P23-201ENST00000414981 CNKSR1Q969H4 720 aa7.64□□□□□ -1.19
HMGB3P23-201ENST00000414981 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
HMGB3P23-201ENST00000414981 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
HMGB3P23-201ENST00000414981 CENPCQ03188 943 aa7.63□□□□□ -1.19
HMGB3P23-201ENST00000414981 WDR44Q5JSH3 913 aa7.63□□□□□ -1.19
HMGB3P23-201ENST00000414981 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
HMGB3P23-201ENST00000414981 IL2RAP01589 272 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 PRICKLE2Q7Z3G6 844 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 PLEKHM2Q8IWE5 1019 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 IRF7Q92985 503 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 GLMNQ92990 594 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 ZMYND15Q9H091 742 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 NOD1Q9Y239 953 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
HMGB3P23-201ENST00000414981 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 WASLO00401 505 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 ATP9BO43861 1147 aa7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 TBC1D9Q6ZT07 1266 aa7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
HMGB3P23-201ENST00000414981 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 INHAP05111 366 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 VSIG8P0DPA2 414 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 VEGFBP49765 207 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 NCOA4Q13772 614 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 ETNK1Q9HBU6 452 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 RAB6BQ9NRW1 208 aa7.6□□□□□ -1.19
HMGB3P23-201ENST00000414981 SENP3-EIF4A1A0A087X0R7 540 aa7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 POU4F2Q12837 409 aa7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 TRIM50Q86XT4 487 aa7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 NANOS1Q8WY41 292 aaKnown RBP7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 FHDC1Q9C0D6 1143 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 TFIP11Q9UBB9 837 aaKnown RBP7.59□□□□□ -1.19
HMGB3P23-201ENST00000414981 WIPF1O43516 503 aa7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 SCNN1DP51172 638 aa7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 GDF10P55107 478 aa7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 NBPF10Q6P3W6 841 aaKnown RBP7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 NBPF15Q8N660 670 aa7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 ZNF777Q9ULD5 760 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P23-201ENST00000414981 ZBTB7BO15156 539 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 GTF2E1P29083 439 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 GTF2IP78347 998 aa7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 PPARGC1BQ86YN6 1023 aaKnown RBP7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 DEPDC4Q8N2C3 294 aa7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 DYRK1BQ9Y463 629 aa7.57□□□□□ -1.2
HMGB3P23-201ENST00000414981 ERBB4Q15303 1308 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 USP17L3A6NCW0 530 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 USP17L4A6NCW7 530 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 TMEM229AB2RXF0 380 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms