RNA–Protein interactions for RNA: ENST00000414367.5

PCDH15-216, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 3,357 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-216ENST00000414367 NEFMP07197 916 aa8.93□□□□□ -0.98
PCDH15-216ENST00000414367 GLI3P10071 1580 aa8.93□□□□□ -0.98
PCDH15-216ENST00000414367 NBPF6Q5VWK0 638 aa8.93□□□□□ -0.98
PCDH15-216ENST00000414367 ZNF526Q8TF50 670 aaPredicted RBP8.93□□□□□ -0.98
PCDH15-216ENST00000414367 NBPF4Q96M43 638 aa8.93□□□□□ -0.98
PCDH15-216ENST00000414367 PANK3Q9H999 370 aa8.93□□□□□ -0.98
PCDH15-216ENST00000414367 CPSF1Q10570 1443 aaKnown RBP8.92□□□□□ -0.98
PCDH15-216ENST00000414367 PTCD1O75127 700 aaKnown RBP8.92□□□□□ -0.98
PCDH15-216ENST00000414367 FHDC1Q9C0D6 1143 aaPredicted RBP8.92□□□□□ -0.98
PCDH15-216ENST00000414367 COL5A2P05997 1499 aaPredicted RBP8.92□□□□□ -0.98
PCDH15-216ENST00000414367 MTFR1LQ9H019 292 aa8.91□□□□□ -0.98
PCDH15-216ENST00000414367 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.98
PCDH15-216ENST00000414367 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.98
PCDH15-216ENST00000414367 EDC4Q6P2E9 1401 aaKnown RBP8.9□□□□□ -0.98
PCDH15-216ENST00000414367 TESK2Q96S53 571 aa8.9□□□□□ -0.98
PCDH15-216ENST00000414367 CABP4P57796 275 aa8.9□□□□□ -0.99
PCDH15-216ENST00000414367 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
PCDH15-216ENST00000414367 SMARCC1Q92922 1105 aaPredicted RBP8.89□□□□□ -0.99
PCDH15-216ENST00000414367 NSD3Q9BZ95 1437 aa8.89□□□□□ -0.99
PCDH15-216ENST00000414367 GNPATO15228 680 aa8.89□□□□□ -0.99
PCDH15-216ENST00000414367 MTHFSP49914 203 aa8.89□□□□□ -0.99
PCDH15-216ENST00000414367 PLEKHO1Q53GL0 409 aaPredicted RBP8.89□□□□□ -0.99
PCDH15-216ENST00000414367 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
PCDH15-216ENST00000414367 HMGB2P26583 209 aaKnown RBP8.88□□□□□ -0.99
PCDH15-216ENST00000414367 COL14A1Q05707 1796 aaKnown RBP8.88□□□□□ -0.99
PCDH15-216ENST00000414367 HMOX1P09601 288 aa8.88□□□□□ -0.99
PCDH15-216ENST00000414367 SBNO2Q9Y2G9 1366 aa8.88□□□□□ -0.99
PCDH15-216ENST00000414367 KNDC1Q76NI1 1749 aa8.88□□□□□ -0.99
PCDH15-216ENST00000414367 SULT6B1Q6IMI4 303 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 IFNL2Q8IZJ0 200 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 PCDH11XQ9BZA7 1347 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 PCDH11YQ9BZA8 1340 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 PROM2Q8N271 834 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
PCDH15-216ENST00000414367 SMIM5Q71RC9 77 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 FLT4P35916 1363 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 NINLQ9Y2I6 1382 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 RFC4P35249 363 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 SLC27A3Q5K4L6 730 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 COL22A1Q8NFW1 1626 aaPredicted RBP8.86□□□□□ -0.99
PCDH15-216ENST00000414367 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 PUS7Q96PZ0 661 aaKnown RBP8.86□□□□□ -0.99
PCDH15-216ENST00000414367 EYA1Q99502 592 aa8.86□□□□□ -0.99
PCDH15-216ENST00000414367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.85□□□□□ -0.99
PCDH15-216ENST00000414367 CFAP53Q96M91 514 aa8.85□□□□□ -0.99
PCDH15-216ENST00000414367 TEFQ10587 303 aa8.85□□□□□ -0.99
PCDH15-216ENST00000414367 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
PCDH15-216ENST00000414367 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
PCDH15-216ENST00000414367 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
PCDH15-216ENST00000414367 ZNF827Q17R98 1081 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 TTC5Q8N0Z6 440 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 ARHGEF28Q8N1W1 1705 aaKnown RBP8.84□□□□□ -0.99
PCDH15-216ENST00000414367 ADGRB2O60241 1585 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 ITSN1Q15811 1721 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 FLAD1Q8NFF5 587 aa8.84□□□□□ -0.99
PCDH15-216ENST00000414367 LOC102724428A0A0B4J2F2 783 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 SIK1P57059 783 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 ASAP1Q9ULH1 1129 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 POLKQ9UBT6 870 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 NUDCQ9Y266 331 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 QRICH2Q9H0J4 1663 aa8.83□□□□□ -1
PCDH15-216ENST00000414367 PNISRQ8TF01 805 aaKnown RBP8.82□□□□□ -1
PCDH15-216ENST00000414367 PALLDQ8WX93 1383 aa8.82□□□□□ -1
PCDH15-216ENST00000414367 CYP27B1O15528 508 aa8.82□□□□□ -1
PCDH15-216ENST00000414367 EIF4A2Q14240 407 aaKnown RBP8.82□□□□□ -1
PCDH15-216ENST00000414367 RTF1Q92541 710 aaKnown RBP8.82□□□□□ -1
PCDH15-216ENST00000414367 USP31Q70CQ4 1352 aa8.82□□□□□ -1
PCDH15-216ENST00000414367 ZPR1O75312 459 aa8.82□□□□□ -1
PCDH15-216ENST00000414367 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
PCDH15-216ENST00000414367 PIGBQ92521 554 aa8.82□□□□□ -1
PCDH15-216ENST00000414367 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -1
PCDH15-216ENST00000414367 COL23A1Q86Y22 540 aaPredicted RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 PPP4R2Q9NY27 417 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 GRIN3BO60391 1043 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 CANXP27824 592 aaKnown RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 ARHGAP27Q6ZUM4 889 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 PARP3Q9Y6F1 533 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
PCDH15-216ENST00000414367 TNS2Q63HR2 1409 aa8.81□□□□□ -1
PCDH15-216ENST00000414367 BRWD3Q6RI45 1802 aa8.8□□□□□ -1
PCDH15-216ENST00000414367 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
PCDH15-216ENST00000414367 PER1O15534 1290 aaPredicted RBP8.8□□□□□ -1
PCDH15-216ENST00000414367 MMP10P09238 476 aa8.8□□□□□ -1
PCDH15-216ENST00000414367 AMOTQ4VCS5 1084 aa8.8□□□□□ -1
PCDH15-216ENST00000414367 NGEFQ8N5V2 710 aa8.8□□□□□ -1
PCDH15-216ENST00000414367 FAM177BA6PVY3 158 aa8.79□□□□□ -1
PCDH15-216ENST00000414367 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
PCDH15-216ENST00000414367 FCHSD2O94868 740 aa8.79□□□□□ -1
PCDH15-216ENST00000414367 SLC39A6Q13433 755 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms