RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 KCNQ4P56696 695 aa34.18■■■■□ 3.06
AC005540.1-201ENST00000413911 NSD2O96028 1365 aa34.18■■■■□ 3.06
AC005540.1-201ENST00000413911 RTL1A6NKG5 1358 aa34.17■■■■□ 3.06
AC005540.1-201ENST00000413911 ZCRB1Q8TBF4 217 aaKnown RBP34.17■■■■□ 3.06
AC005540.1-201ENST00000413911 DOT1LQ8TEK3 1739 aa34.16■■■■□ 3.06
AC005540.1-201ENST00000413911 TRIM26Q12899 539 aaPredicted RBP34.16■■■■□ 3.06
AC005540.1-201ENST00000413911 SYTL4Q96C24 671 aaPredicted RBP34.16■■■■□ 3.06
AC005540.1-201ENST00000413911 USHBP1Q8N6Y0 703 aa34.15■■■■□ 3.06
AC005540.1-201ENST00000413911 SLC27A3Q5K4L6 730 aa34.14■■■■□ 3.06
AC005540.1-201ENST00000413911 ARXQ96QS3 562 aa34.13■■■■□ 3.05
AC005540.1-201ENST00000413911 HSP90AB2PQ58FF8 381 aa34.1■■■■□ 3.05
AC005540.1-201ENST00000413911 PNPLA7Q6ZV29 1317 aa34.09■■■■□ 3.05
AC005540.1-201ENST00000413911 CARD14Q9BXL6 1004 aa34.09■■■■□ 3.05
AC005540.1-201ENST00000413911 LY75O60449 1722 aa34.08■■■■□ 3.05
AC005540.1-201ENST00000413911 QSER1Q2KHR3 1735 aa34.07■■■■□ 3.05
AC005540.1-201ENST00000413911 TUBGCP6Q96RT7 1819 aa34.07■■■■□ 3.04
AC005540.1-201ENST00000413911 KIF20BQ96Q89 1820 aa34.07■■■■□ 3.04
AC005540.1-201ENST00000413911 INSRP06213 1382 aa34.05■■■■□ 3.04
AC005540.1-201ENST00000413911 MAP3K5Q99683 1374 aa34.04■■■■□ 3.04
AC005540.1-201ENST00000413911 SLC16A10Q8TF71 515 aa34.02■■■■□ 3.04
AC005540.1-201ENST00000413911 RAPGEF4Q8WZA2 1011 aa34.02■■■■□ 3.04
AC005540.1-201ENST00000413911 TFCP2L1Q9NZI6 479 aa34.02■■■■□ 3.04
AC005540.1-201ENST00000413911 SMG6Q86US8 1419 aaKnown RBP34.02■■■■□ 3.04
AC005540.1-201ENST00000413911 CGNL1Q0VF96 1302 aa34.02■■■■□ 3.04
AC005540.1-201ENST00000413911 COL24A1Q17RW2 1714 aa34.01■■■■□ 3.04
AC005540.1-201ENST00000413911 CDCA8Q53HL2 280 aa34.01■■■■□ 3.03
AC005540.1-201ENST00000413911 FLT4P35916 1363 aa34■■■■□ 3.03
AC005540.1-201ENST00000413911 CCNL1Q9UK58 526 aaPredicted RBP34■■■■□ 3.03
AC005540.1-201ENST00000413911 TATP17735 454 aaPredicted RBP33.99■■■■□ 3.03
AC005540.1-201ENST00000413911 EMILIN1Q9Y6C2 1016 aa33.99■■■■□ 3.03
AC005540.1-201ENST00000413911 NSD3Q9BZ95 1437 aa33.98■■■■□ 3.03
AC005540.1-201ENST00000413911 KIF24Q5T7B8 1368 aa33.97■■■■□ 3.03
AC005540.1-201ENST00000413911 ZNF784Q8NCA9 323 aaPredicted RBP33.95■■■■□ 3.03
AC005540.1-201ENST00000413911 CYP27B1O15528 508 aa33.94■■■■□ 3.02
AC005540.1-201ENST00000413911 GOLGB1Q14789 3259 aaKnown RBP33.93■■■■□ 3.02
AC005540.1-201ENST00000413911 POLD1P28340 1107 aa33.92■■■■□ 3.02
AC005540.1-201ENST00000413911 PCDH11XQ9BZA7 1347 aa33.92■■■■□ 3.02
AC005540.1-201ENST00000413911 PCDH11YQ9BZA8 1340 aa33.92■■■■□ 3.02
AC005540.1-201ENST00000413911 COL23A1Q86Y22 540 aaPredicted RBP33.91■■■■□ 3.02
AC005540.1-201ENST00000413911 KLHL34Q8N239 644 aa33.91■■■■□ 3.02
AC005540.1-201ENST00000413911 TOGARAM1Q9Y4F4 1720 aa33.89■■■■□ 3.02
AC005540.1-201ENST00000413911 NCAPD2Q15021 1401 aa33.88■■■■□ 3.01
AC005540.1-201ENST00000413911 NLGN2Q8NFZ4 835 aa33.88■■■■□ 3.01
AC005540.1-201ENST00000413911 CHD4Q14839 1912 aa33.88■■■■□ 3.01
AC005540.1-201ENST00000413911 MPRIPQ6WCQ1 1025 aa33.87■■■■□ 3.01
AC005540.1-201ENST00000413911 PPM1GO15355 546 aaPredicted RBP33.86■■■■□ 3.01
AC005540.1-201ENST00000413911 ANKRD26Q9UPS8 1709 aa33.86■■■■□ 3.01
AC005540.1-201ENST00000413911 PALLDQ8WX93 1383 aa33.85■■■■□ 3.01
AC005540.1-201ENST00000413911 PKD1L3Q7Z443 1732 aa33.85■■■■□ 3.01
AC005540.1-201ENST00000413911 C5P01031 1676 aa33.85■■■■□ 3.01
AC005540.1-201ENST00000413911 GPR162Q16538 588 aa33.85■■■■□ 3.01
AC005540.1-201ENST00000413911 TIMELESSQ9UNS1 1208 aa33.85■■■■□ 3.01
AC005540.1-201ENST00000413911 MSH5O43196 834 aa33.83■■■■□ 3.01
AC005540.1-201ENST00000413911 WASHC2AQ641Q2 1341 aa33.82■■■■□ 3.01
AC005540.1-201ENST00000413911 ITGB4P16144 1822 aa33.82■■■■□ 3
AC005540.1-201ENST00000413911 MSL1Q68DK7 614 aa33.82■■■■□ 3
AC005540.1-201ENST00000413911 EYA1Q99502 592 aa33.81■■■■□ 3
AC005540.1-201ENST00000413911 TAF1LQ8IZX4 1826 aa33.81■■■■□ 3
AC005540.1-201ENST00000413911 POLKQ9UBT6 870 aa33.8■■■■□ 3
AC005540.1-201ENST00000413911 MAP2P11137 1827 aaKnown RBP33.79■■■■□ 3
AC005540.1-201ENST00000413911 NKX1-1Q15270 411 aaPredicted RBP33.79■■■■□ 3
AC005540.1-201ENST00000413911 PIGBQ92521 554 aa33.79■■■■□ 3
AC005540.1-201ENST00000413911 AMIGO3Q86WK7 504 aa33.78■■■■□ 3
AC005540.1-201ENST00000413911 PELP1Q8IZL8 1130 aaKnown RBP33.77■■■■□ 3
AC005540.1-201ENST00000413911 PCGF6Q9BYE7 350 aa33.76■■■□□ 2.99
AC005540.1-201ENST00000413911 SMIM5Q71RC9 77 aa33.74■■■□□ 2.99
AC005540.1-201ENST00000413911 POLR3GLQ9BT43 218 aa33.74■■■□□ 2.99
AC005540.1-201ENST00000413911 C4BP0C0L5 1744 aa33.73■■■□□ 2.99
AC005540.1-201ENST00000413911 SPG7Q9UQ90 795 aa33.73■■■□□ 2.99
AC005540.1-201ENST00000413911 CLSPNQ9HAW4 1339 aa33.73■■■□□ 2.99
AC005540.1-201ENST00000413911 YBX3P16989 372 aaKnown RBP eCLIP33.72■■■□□ 2.99
AC005540.1-201ENST00000413911 SMARCC1Q92922 1105 aaPredicted RBP33.72■■■□□ 2.99
AC005540.1-201ENST00000413911 TNNT2P45379 298 aaPredicted RBP33.71■■■□□ 2.99
AC005540.1-201ENST00000413911 EIF4A2Q14240 407 aaKnown RBP33.69■■■□□ 2.98
AC005540.1-201ENST00000413911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.69■■■□□ 2.98
AC005540.1-201ENST00000413911 FLAD1Q8NFF5 587 aa33.68■■■□□ 2.98
AC005540.1-201ENST00000413911 PHKG2P15735 406 aa33.67■■■□□ 2.98
AC005540.1-201ENST00000413911 UBR3Q6ZT12 1888 aa33.66■■■□□ 2.98
AC005540.1-201ENST00000413911 AK7Q96M32 723 aa33.66■■■□□ 2.98
AC005540.1-201ENST00000413911 ASAP1Q9ULH1 1129 aa33.66■■■□□ 2.98
AC005540.1-201ENST00000413911 LOC102724428A0A0B4J2F2 783 aa33.65■■■□□ 2.98
AC005540.1-201ENST00000413911 SIK1P57059 783 aa33.65■■■□□ 2.98
AC005540.1-201ENST00000413911 LINC00116Q8NCU8 138 aa33.65■■■□□ 2.98
AC005540.1-201ENST00000413911 HSPA5P11021 654 aaKnown RBP33.64■■■□□ 2.98
AC005540.1-201ENST00000413911 PHF14O94880 888 aa33.63■■■□□ 2.97
AC005540.1-201ENST00000413911 IFNL2Q8IZJ0 200 aa33.63■■■□□ 2.97
AC005540.1-201ENST00000413911 TMOD3Q9NYL9 352 aa33.63■■■□□ 2.97
AC005540.1-201ENST00000413911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.62■■■□□ 2.97
AC005540.1-201ENST00000413911 HMGB2P26583 209 aaKnown RBP33.62■■■□□ 2.97
AC005540.1-201ENST00000413911 ITPK1Q13572 414 aa33.62■■■□□ 2.97
AC005540.1-201ENST00000413911 PANK3Q9H999 370 aa33.61■■■□□ 2.97
AC005540.1-201ENST00000413911 CD2APQ9Y5K6 639 aa33.61■■■□□ 2.97
AC005540.1-201ENST00000413911 C1QTNF8P60827 252 aa33.59■■■□□ 2.97
AC005540.1-201ENST00000413911 EIF4G2P78344 907 aaKnown RBP eCLIP33.59■■■□□ 2.97
AC005540.1-201ENST00000413911 ATG3Q9NT62 314 aa33.59■■■□□ 2.97
AC005540.1-201ENST00000413911 IGSF1Q8N6C5 1336 aa33.58■■■□□ 2.97
AC005540.1-201ENST00000413911 GRIN3BO60391 1043 aa33.57■■■□□ 2.96
AC005540.1-201ENST00000413911 SSFA2P28290 1259 aa33.55■■■□□ 2.96
AC005540.1-201ENST00000413911 ATP6V1AP38606 617 aa33.55■■■□□ 2.96
AC005540.1-201ENST00000413911 SLC4A9Q96Q91 983 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms