RNA–Protein interactions for RNA: ENST00000413392.5

CBX8-202, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-202ENST00000413392 SF3B2Q13435 895 aaKnown RBP23.17■■□□□ 1.3
CBX8-202ENST00000413392 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
CBX8-202ENST00000413392 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
CBX8-202ENST00000413392 MARCH10Q8NA82 808 aaPredicted RBP23.16■■□□□ 1.3
CBX8-202ENST00000413392 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
CBX8-202ENST00000413392 SBF2Q86WG5 1849 aa23.15■■□□□ 1.3
CBX8-202ENST00000413392 KDRP35968 1356 aa23.14■■□□□ 1.3
CBX8-202ENST00000413392 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.3
CBX8-202ENST00000413392 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.3
CBX8-202ENST00000413392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.29
CBX8-202ENST00000413392 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
CBX8-202ENST00000413392 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
CBX8-202ENST00000413392 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
CBX8-202ENST00000413392 DDX54Q8TDD1 881 aaKnown RBP23.1■■□□□ 1.29
CBX8-202ENST00000413392 NUDCQ9Y266 331 aa23.1■■□□□ 1.29
CBX8-202ENST00000413392 NHSQ6T4R5 1651 aa23.09■■□□□ 1.29
CBX8-202ENST00000413392 MYBBP1AQ9BQG0 1328 aaKnown RBP23.09■■□□□ 1.29
CBX8-202ENST00000413392 TRIM37O94972 964 aa23.08■■□□□ 1.29
CBX8-202ENST00000413392 BAG6P46379 1132 aa23.08■■□□□ 1.29
CBX8-202ENST00000413392 AMOTQ4VCS5 1084 aa23.08■■□□□ 1.29
CBX8-202ENST00000413392 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
CBX8-202ENST00000413392 RGPD3A6NKT7 1758 aaPredicted RBP23.06■■□□□ 1.28
CBX8-202ENST00000413392 RGPD4Q7Z3J3 1758 aa23.06■■□□□ 1.28
CBX8-202ENST00000413392 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
CBX8-202ENST00000413392 PLEKHO1Q53GL0 409 aaPredicted RBP23.05■■□□□ 1.28
CBX8-202ENST00000413392 AEBP1Q8IUX7 1158 aa23.05■■□□□ 1.28
CBX8-202ENST00000413392 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
CBX8-202ENST00000413392 DOT1LQ8TEK3 1739 aa23.05■■□□□ 1.28
CBX8-202ENST00000413392 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
CBX8-202ENST00000413392 CYP27B1O15528 508 aa23.02■■□□□ 1.28
CBX8-202ENST00000413392 APBA3O96018 575 aa23.01■■□□□ 1.27
CBX8-202ENST00000413392 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
CBX8-202ENST00000413392 HMOX1P09601 288 aa23.01■■□□□ 1.27
CBX8-202ENST00000413392 KAT6BQ8WYB5 2073 aa23.01■■□□□ 1.27
CBX8-202ENST00000413392 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
CBX8-202ENST00000413392 PHKG2P15735 406 aa22.99■■□□□ 1.27
CBX8-202ENST00000413392 U2AF1L5P0DN76 240 aaPredicted RBP22.98■■□□□ 1.27
CBX8-202ENST00000413392 U2AF1Q01081 240 aaKnown RBP eCLIP22.98■■□□□ 1.27
CBX8-202ENST00000413392 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
CBX8-202ENST00000413392 DEFB132Q7Z7B7 95 aa22.98■■□□□ 1.27
CBX8-202ENST00000413392 ACSBG1Q96GR2 724 aa22.98■■□□□ 1.27
CBX8-202ENST00000413392 BTAF1O14981 1849 aa22.98■■□□□ 1.27
CBX8-202ENST00000413392 PLSCR1O15162 318 aa22.97■■□□□ 1.27
CBX8-202ENST00000413392 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
CBX8-202ENST00000413392 ANP32CO43423 234 aa22.96■■□□□ 1.27
CBX8-202ENST00000413392 TOGARAM1Q9Y4F4 1720 aa22.96■■□□□ 1.27
CBX8-202ENST00000413392 KCNQ2O43526 872 aa22.95■■□□□ 1.26
CBX8-202ENST00000413392 FCHSD2O94868 740 aa22.95■■□□□ 1.26
CBX8-202ENST00000413392 EN1Q05925 392 aaPredicted RBP22.95■■□□□ 1.26
CBX8-202ENST00000413392 RREB1Q92766 1687 aa22.95■■□□□ 1.26
CBX8-202ENST00000413392 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
CBX8-202ENST00000413392 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
CBX8-202ENST00000413392 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
CBX8-202ENST00000413392 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
CBX8-202ENST00000413392 PRIM1P49642 420 aaKnown RBP22.93■■□□□ 1.26
CBX8-202ENST00000413392 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
CBX8-202ENST00000413392 GAS2L2Q8NHY3 880 aa22.93■■□□□ 1.26
CBX8-202ENST00000413392 CAMKK2Q96RR4 588 aa22.93■■□□□ 1.26
CBX8-202ENST00000413392 ITGB4P16144 1822 aa22.93■■□□□ 1.26
CBX8-202ENST00000413392 NEFMP07197 916 aa22.92■■□□□ 1.26
CBX8-202ENST00000413392 PRKAR2BP31323 418 aa22.91■■□□□ 1.26
CBX8-202ENST00000413392 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
CBX8-202ENST00000413392 PTF1AQ7RTS3 328 aa22.9■■□□□ 1.26
CBX8-202ENST00000413392 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.26
CBX8-202ENST00000413392 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.25
CBX8-202ENST00000413392 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.25
CBX8-202ENST00000413392 NUP188Q5SRE5 1749 aa22.88■■□□□ 1.25
CBX8-202ENST00000413392 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
CBX8-202ENST00000413392 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
CBX8-202ENST00000413392 MPRIPQ6WCQ1 1025 aa22.87■■□□□ 1.25
CBX8-202ENST00000413392 TMOD3Q9NYL9 352 aa22.87■■□□□ 1.25
CBX8-202ENST00000413392 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
CBX8-202ENST00000413392 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
CBX8-202ENST00000413392 LY75O60449 1722 aa22.86■■□□□ 1.25
CBX8-202ENST00000413392 MAP3K5Q99683 1374 aa22.86■■□□□ 1.25
CBX8-202ENST00000413392 HMGB2P26583 209 aaKnown RBP22.85■■□□□ 1.25
CBX8-202ENST00000413392 SMARCC1Q92922 1105 aaPredicted RBP22.84■■□□□ 1.25
CBX8-202ENST00000413392 MRC1P22897 1456 aa22.84■■□□□ 1.25
CBX8-202ENST00000413392 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
CBX8-202ENST00000413392 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
CBX8-202ENST00000413392 TXNRD1Q16881 649 aa22.83■■□□□ 1.25
CBX8-202ENST00000413392 SLC27A3Q5K4L6 730 aa22.83■■□□□ 1.25
CBX8-202ENST00000413392 CABP4P57796 275 aa22.82■■□□□ 1.24
CBX8-202ENST00000413392 PIGBQ92521 554 aa22.82■■□□□ 1.24
CBX8-202ENST00000413392 PHACTR3Q96KR7 559 aa22.82■■□□□ 1.24
CBX8-202ENST00000413392 NBPF14Q5TI25 921 aa22.81■■□□□ 1.24
CBX8-202ENST00000413392 PLEKHF1Q96S99 279 aa22.81■■□□□ 1.24
CBX8-202ENST00000413392 PALLDQ8WX93 1383 aa22.8■■□□□ 1.24
CBX8-202ENST00000413392 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
CBX8-202ENST00000413392 PROM2Q8N271 834 aa22.79■■□□□ 1.24
CBX8-202ENST00000413392 HTATSF1O43719 755 aaKnown RBP22.78■■□□□ 1.24
CBX8-202ENST00000413392 RTF1Q92541 710 aaKnown RBP22.78■■□□□ 1.24
CBX8-202ENST00000413392 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
CBX8-202ENST00000413392 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
CBX8-202ENST00000413392 CCNL1Q9UK58 526 aaPredicted RBP22.76■■□□□ 1.23
CBX8-202ENST00000413392 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
CBX8-202ENST00000413392 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
CBX8-202ENST00000413392 DLG5Q8TDM6 1919 aa22.75■■□□□ 1.23
CBX8-202ENST00000413392 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
CBX8-202ENST00000413392 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms