RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 LTV1Q96GA3 475 aaPredicted RBP22.27■■□□□ 1.15
CROCCP2-202ENST00000412962 RTL1A6NKG5 1358 aa22.26■■□□□ 1.15
CROCCP2-202ENST00000412962 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
CROCCP2-202ENST00000412962 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
CROCCP2-202ENST00000412962 NFAT5O94916 1531 aa22.25■■□□□ 1.15
CROCCP2-202ENST00000412962 HDAC1Q13547 482 aaPredicted RBP22.25■■□□□ 1.15
CROCCP2-202ENST00000412962 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
CROCCP2-202ENST00000412962 ORAI2Q96SN7 254 aa22.25■■□□□ 1.15
CROCCP2-202ENST00000412962 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
CROCCP2-202ENST00000412962 VIRMAQ69YN4 1812 aaKnown RBP22.24■■□□□ 1.15
CROCCP2-202ENST00000412962 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
CROCCP2-202ENST00000412962 EIF5BO60841 1220 aaKnown RBP22.23■■□□□ 1.15
CROCCP2-202ENST00000412962 ABCC4O15439 1325 aa22.23■■□□□ 1.15
CROCCP2-202ENST00000412962 KIAA0232Q92628 1395 aa22.22■■□□□ 1.15
CROCCP2-202ENST00000412962 XPCQ01831 940 aaPredicted RBP22.21■■□□□ 1.15
CROCCP2-202ENST00000412962 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
CROCCP2-202ENST00000412962 HAP1P54257 671 aaPredicted RBP22.21■■□□□ 1.15
CROCCP2-202ENST00000412962 IP6K1Q92551 441 aa22.2■■□□□ 1.14
CROCCP2-202ENST00000412962 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
CROCCP2-202ENST00000412962 SLC4A3P48751 1232 aa22.2■■□□□ 1.14
CROCCP2-202ENST00000412962 ZBTB7BO15156 539 aaPredicted RBP22.19■■□□□ 1.14
CROCCP2-202ENST00000412962 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
CROCCP2-202ENST00000412962 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
CROCCP2-202ENST00000412962 USHBP1Q8N6Y0 703 aa22.19■■□□□ 1.14
CROCCP2-202ENST00000412962 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
CROCCP2-202ENST00000412962 CHMP4BQ9H444 224 aaKnown RBP22.18■■□□□ 1.14
CROCCP2-202ENST00000412962 LRRC37A3O60309 1634 aa22.18■■□□□ 1.14
CROCCP2-202ENST00000412962 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
CROCCP2-202ENST00000412962 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
CROCCP2-202ENST00000412962 SMC5Q8IY18 1101 aa22.16■■□□□ 1.14
CROCCP2-202ENST00000412962 C19orf44Q9H6X5 657 aa22.16■■□□□ 1.14
CROCCP2-202ENST00000412962 C1orf167Q5SNV9 1468 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 PHRF1Q9P1Y6 1649 aaKnown RBP22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 PLEKHG5O94827 1062 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 LMOD2Q6P5Q4 547 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 C1orf115Q9H7X2 142 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 KIF1AQ12756 1690 aa22.15■■□□□ 1.14
CROCCP2-202ENST00000412962 MSH6P52701 1360 aa22.14■■□□□ 1.13
CROCCP2-202ENST00000412962 SLIT3O75094 1523 aa22.13■■□□□ 1.13
CROCCP2-202ENST00000412962 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
CROCCP2-202ENST00000412962 GCP02774 474 aa22.13■■□□□ 1.13
CROCCP2-202ENST00000412962 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
CROCCP2-202ENST00000412962 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
CROCCP2-202ENST00000412962 RGS12O14924 1447 aa22.12■■□□□ 1.13
CROCCP2-202ENST00000412962 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
CROCCP2-202ENST00000412962 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
CROCCP2-202ENST00000412962 STRCP1A6NGW2 1772 aa22.11■■□□□ 1.13
CROCCP2-202ENST00000412962 IL17REQ8NFR9 667 aa22.1■■□□□ 1.13
CROCCP2-202ENST00000412962 TMEM94Q12767 1356 aa22.1■■□□□ 1.13
CROCCP2-202ENST00000412962 PTPRCP08575 1304 aa22.09■■□□□ 1.13
CROCCP2-202ENST00000412962 SLC4A2P04920 1241 aa22.09■■□□□ 1.13
CROCCP2-202ENST00000412962 ARHGEF25Q86VW2 580 aa22.09■■□□□ 1.13
CROCCP2-202ENST00000412962 SEC24BO95487 1268 aa22.09■■□□□ 1.13
CROCCP2-202ENST00000412962 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
CROCCP2-202ENST00000412962 USP19O94966 1318 aa22.08■■□□□ 1.13
CROCCP2-202ENST00000412962 LRRC59Q96AG4 307 aaKnown RBP22.08■■□□□ 1.13
CROCCP2-202ENST00000412962 ATF3P18847 181 aa22.08■■□□□ 1.12
CROCCP2-202ENST00000412962 NUCB1Q02818 461 aa22.08■■□□□ 1.12
CROCCP2-202ENST00000412962 MST1RQ04912 1400 aa22.07■■□□□ 1.12
CROCCP2-202ENST00000412962 UBE2Q2Q8WVN8 375 aa22.06■■□□□ 1.12
CROCCP2-202ENST00000412962 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
CROCCP2-202ENST00000412962 HSPA2P54652 639 aa22.05■■□□□ 1.12
CROCCP2-202ENST00000412962 TAF7Q15545 349 aaPredicted RBP22.05■■□□□ 1.12
CROCCP2-202ENST00000412962 LNPKQ9C0E8 428 aa22.05■■□□□ 1.12
CROCCP2-202ENST00000412962 ALS2Q96Q42 1657 aa22.04■■□□□ 1.12
CROCCP2-202ENST00000412962 CHD1LQ86WJ1 897 aa22.04■■□□□ 1.12
CROCCP2-202ENST00000412962 GCC1Q96CN9 775 aa22.04■■□□□ 1.12
CROCCP2-202ENST00000412962 G2E3Q7L622 706 aa22.04■■□□□ 1.12
CROCCP2-202ENST00000412962 DCCP43146 1447 aa22.03■■□□□ 1.12
CROCCP2-202ENST00000412962 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
CROCCP2-202ENST00000412962 RTL5Q5HYW3 569 aaPredicted RBP22.03■■□□□ 1.12
CROCCP2-202ENST00000412962 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
CROCCP2-202ENST00000412962 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
CROCCP2-202ENST00000412962 BABAM1Q9NWV8 329 aa22.02■■□□□ 1.12
CROCCP2-202ENST00000412962 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
CROCCP2-202ENST00000412962 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
CROCCP2-202ENST00000412962 ANKRD45Q5TZF3 282 aa22.01■■□□□ 1.11
CROCCP2-202ENST00000412962 NCOA3Q9Y6Q9 1424 aa22.01■■□□□ 1.11
CROCCP2-202ENST00000412962 AXIN2Q9Y2T1 843 aa22■■□□□ 1.11
CROCCP2-202ENST00000412962 NCAPD2Q15021 1401 aa22■■□□□ 1.11
CROCCP2-202ENST00000412962 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
CROCCP2-202ENST00000412962 LMO7Q8WWI1 1683 aa22■■□□□ 1.11
CROCCP2-202ENST00000412962 CCDC30Q5VVM6 783 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 RGPD5Q99666 1765 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 ZNF530Q6P9A1 599 aaPredicted RBP21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 NECTIN2Q92692 538 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 F6X3S4 739 aa21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 PLEKHO1Q53GL0 409 aaPredicted RBP21.99■■□□□ 1.11
CROCCP2-202ENST00000412962 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
CROCCP2-202ENST00000412962 ZC3H6P61129 1189 aaKnown RBP21.98■■□□□ 1.11
CROCCP2-202ENST00000412962 SLC4A10Q6U841 1118 aa21.98■■□□□ 1.11
CROCCP2-202ENST00000412962 MEIS3Q99687 375 aa21.98■■□□□ 1.11
CROCCP2-202ENST00000412962 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
CROCCP2-202ENST00000412962 SOS1Q07889 1333 aaPredicted RBP21.97■■□□□ 1.11
CROCCP2-202ENST00000412962 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
CROCCP2-202ENST00000412962 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms