RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 FAM76AQ8TAV0 307 aa7.37□□□□□ -1.23
PCDH18-202ENST00000412923 PPP1R9BQ96SB3 815 aa7.37□□□□□ -1.23
PCDH18-202ENST00000412923 TSPYL2Q9H2G4 693 aaPredicted RBP7.37□□□□□ -1.23
PCDH18-202ENST00000412923 TAOK3Q9H2K8 898 aa7.37□□□□□ -1.23
PCDH18-202ENST00000412923 CXorf38Q8TB03 319 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 TRIM63Q969Q1 353 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 UTP6Q9NYH9 597 aaKnown RBP7.36□□□□□ -1.23
PCDH18-202ENST00000412923 IPO8O15397 1037 aaKnown RBP7.36□□□□□ -1.23
PCDH18-202ENST00000412923 PPFIA2O75334 1257 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 TMF1P82094 1093 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 AMOTQ4VCS5 1084 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 ODF2Q5BJF6 829 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 SEPT10Q9P0V9 454 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 STMN1P16949 149 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 UVSSAQ2YD98 709 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 GRIPAP1Q4V328 841 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 ANKRD13AQ8IZ07 590 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC110Q8TBZ0 833 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 NSRP1Q9H0G5 558 aaKnown RBP7.36□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC171Q6TFL3 1326 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 ZSCAN12O43309 604 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 TMED1Q13445 227 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 ARMC2Q8NEN0 867 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 DAAM1Q9Y4D1 1078 aa7.36□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC192P0DO97 292 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 CACNA2D3Q8IZS8 1091 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 SEPT8Q92599 483 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 TRIM6Q9C030 488 aaPredicted RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 POLE3Q9NRF9 147 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 LARSQ9P2J5 1176 aaKnown RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 ERC2O15083 957 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 NEUROD2Q15784 382 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 RUFY3Q7L099 469 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 CGNL1Q0VF96 1302 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 XPCQ01831 940 aaPredicted RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC73Q6ZRK6 1079 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 BICD2Q8TD16 824 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 ANKRD24Q8TF21 1146 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 KDM4AO75164 1064 aa7.35□□□□□ -1.23
PCDH18-202ENST00000412923 LACTBP83111 547 aaPredicted RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 SF3A1Q15459 793 aaKnown RBP7.35□□□□□ -1.23
PCDH18-202ENST00000412923 H0YC42 278 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 INPP5BP32019 993 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 RFC1P35251 1148 aaPredicted RBP7.34□□□□□ -1.23
PCDH18-202ENST00000412923 TPD52P55327 224 aaPredicted RBP7.34□□□□□ -1.23
PCDH18-202ENST00000412923 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
PCDH18-202ENST00000412923 EIF3AQ14152 1382 aaKnown RBP7.34□□□□□ -1.23
PCDH18-202ENST00000412923 ZBED9Q6R2W3 1325 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 RWDD2BP57060 319 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 SKIDA1Q1XH10 827 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC144CPQ8IYA2 1237 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 ANKS4BQ8N8V4 417 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 ARFGAP3Q9NP61 516 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 HDGFL1Q5TGJ6 251 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 SAAL1Q96ER3 474 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 GFAPP14136 432 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 TXLNAP40222 546 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 PRPF4BQ13523 1007 aaKnown RBP7.34□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC80Q76M96 950 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 CCDC148Q8NFR7 591 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 SMC3Q9UQE7 1217 aa7.34□□□□□ -1.23
PCDH18-202ENST00000412923 LRRD1A4D1F6 860 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 STAMBPO95630 424 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 CDCA8Q53HL2 280 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 SMC6Q96SB8 1091 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 THEGQ9P2T0 379 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 MAFGO15525 162 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 KIF4AO95239 1232 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 RGS22Q8NE09 1264 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 ZKSCAN5Q9Y2L8 839 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 ATICP31939 592 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 IFFO1Q0D2I5 559 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 NMIQ13287 307 aaPredicted RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 MSL3Q8N5Y2 521 aaKnown RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 MRFAP1Q9Y605 127 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 OPA1O60313 960 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 TROVE2P10155 538 aaKnown RBP eCLIP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 GBP1P32455 592 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 PIP4K2AP48426 406 aaPredicted RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 MCM2P49736 904 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 CTCFLQ8NI51 663 aaPredicted RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 GFM2Q969S9 779 aaKnown RBP7.33□□□□□ -1.24
PCDH18-202ENST00000412923 SCLT1Q96NL6 688 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 SUFUQ9UMX1 484 aa7.33□□□□□ -1.24
PCDH18-202ENST00000412923 CCDC160A6NGH7 325 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 SPECC1L-ADORA2AF8WAN1 911 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 DHX16O60231 1041 aaKnown RBP7.32□□□□□ -1.24
PCDH18-202ENST00000412923 EFCAB13Q8IY85 973 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 IFT74Q96LB3 600 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 CLIP2Q9UDT6 1046 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 WDHD1O75717 1129 aaPredicted RBP7.32□□□□□ -1.24
PCDH18-202ENST00000412923 CDKL5O76039 1030 aa7.32□□□□□ -1.24
PCDH18-202ENST00000412923 CC2D2BQ6DHV5 1058 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms