RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 TIMELESSQ9UNS1 1208 aa30.6■■■□□ 2.49
CROT-202ENST00000412227 YY1P25490 414 aa30.59■■■□□ 2.49
CROT-202ENST00000412227 PRIM1P49642 420 aaKnown RBP30.59■■■□□ 2.49
CROT-202ENST00000412227 USHBP1Q8N6Y0 703 aa30.58■■■□□ 2.49
CROT-202ENST00000412227 ZNF827Q17R98 1081 aa30.57■■■□□ 2.48
CROT-202ENST00000412227 SLC27A3Q5K4L6 730 aa30.57■■■□□ 2.48
CROT-202ENST00000412227 RAPGEF4Q8WZA2 1011 aa30.55■■■□□ 2.48
CROT-202ENST00000412227 CARD14Q9BXL6 1004 aa30.55■■■□□ 2.48
CROT-202ENST00000412227 PCGF6Q9BYE7 350 aa30.55■■■□□ 2.48
CROT-202ENST00000412227 INSRP06213 1382 aa30.54■■■□□ 2.48
CROT-202ENST00000412227 CGNL1Q0VF96 1302 aa30.54■■■□□ 2.48
CROT-202ENST00000412227 HSP90AB2PQ58FF8 381 aa30.54■■■□□ 2.48
CROT-202ENST00000412227 FLT4P35916 1363 aa30.54■■■□□ 2.48
CROT-202ENST00000412227 LY75O60449 1722 aa30.53■■■□□ 2.48
CROT-202ENST00000412227 SGIP1Q9BQI5 828 aa30.53■■■□□ 2.48
CROT-202ENST00000412227 NSD3Q9BZ95 1437 aa30.53■■■□□ 2.48
CROT-202ENST00000412227 QSER1Q2KHR3 1735 aa30.53■■■□□ 2.48
CROT-202ENST00000412227 TATP17735 454 aaPredicted RBP30.52■■■□□ 2.48
CROT-202ENST00000412227 AKT1S1Q96B36 256 aa30.52■■■□□ 2.48
CROT-202ENST00000412227 FHDC1Q9C0D6 1143 aaPredicted RBP30.52■■■□□ 2.48
CROT-202ENST00000412227 CLSPNQ9HAW4 1339 aa30.51■■■□□ 2.48
CROT-202ENST00000412227 KIF24Q5T7B8 1368 aa30.51■■■□□ 2.47
CROT-202ENST00000412227 KCNQ4P56696 695 aa30.5■■■□□ 2.47
CROT-202ENST00000412227 SYT17Q9BSW7 474 aa30.5■■■□□ 2.47
CROT-202ENST00000412227 NSD2O96028 1365 aa30.5■■■□□ 2.47
CROT-202ENST00000412227 TUBGCP6Q96RT7 1819 aa30.5■■■□□ 2.47
CROT-202ENST00000412227 MAP2P11137 1827 aaKnown RBP30.49■■■□□ 2.47
CROT-202ENST00000412227 ARXQ96QS3 562 aa30.48■■■□□ 2.47
CROT-202ENST00000412227 TFCP2L1Q9NZI6 479 aa30.46■■■□□ 2.47
CROT-202ENST00000412227 EMILIN1Q9Y6C2 1016 aa30.46■■■□□ 2.47
CROT-202ENST00000412227 SLC16A10Q8TF71 515 aa30.45■■■□□ 2.47
CROT-202ENST00000412227 PPM1GO15355 546 aaPredicted RBP30.44■■■□□ 2.46
CROT-202ENST00000412227 CCNL1Q9UK58 526 aaPredicted RBP30.44■■■□□ 2.46
CROT-202ENST00000412227 PNPLA7Q6ZV29 1317 aa30.44■■■□□ 2.46
CROT-202ENST00000412227 PCDH11XQ9BZA7 1347 aa30.44■■■□□ 2.46
CROT-202ENST00000412227 PCDH11YQ9BZA8 1340 aa30.44■■■□□ 2.46
CROT-202ENST00000412227 POLR3GLQ9BT43 218 aa30.42■■■□□ 2.46
CROT-202ENST00000412227 ANKRD26Q9UPS8 1709 aa30.4■■■□□ 2.46
CROT-202ENST00000412227 COL24A1Q17RW2 1714 aa30.39■■■□□ 2.46
CROT-202ENST00000412227 ITGB4P16144 1822 aa30.39■■■□□ 2.46
CROT-202ENST00000412227 CHD4Q14839 1912 aa30.39■■■□□ 2.46
CROT-202ENST00000412227 POLD1P28340 1107 aa30.38■■■□□ 2.45
CROT-202ENST00000412227 PKD1L3Q7Z443 1732 aa30.37■■■□□ 2.45
CROT-202ENST00000412227 CYP27B1O15528 508 aa30.36■■■□□ 2.45
CROT-202ENST00000412227 MAP3K5Q99683 1374 aa30.36■■■□□ 2.45
CROT-202ENST00000412227 MPRIPQ6WCQ1 1025 aa30.35■■■□□ 2.45
CROT-202ENST00000412227 WASHC2AQ641Q2 1341 aa30.35■■■□□ 2.45
CROT-202ENST00000412227 TAF1LQ8IZX4 1826 aa30.34■■■□□ 2.45
CROT-202ENST00000412227 C5P01031 1676 aa30.34■■■□□ 2.45
CROT-202ENST00000412227 KLHL34Q8N239 644 aa30.34■■■□□ 2.45
CROT-202ENST00000412227 MSH5O43196 834 aa30.33■■■□□ 2.45
CROT-202ENST00000412227 TOGARAM1Q9Y4F4 1720 aa30.33■■■□□ 2.45
CROT-202ENST00000412227 NCAPD2Q15021 1401 aa30.31■■■□□ 2.44
CROT-202ENST00000412227 EIF4G2P78344 907 aaKnown RBP eCLIP30.31■■■□□ 2.44
CROT-202ENST00000412227 POLKQ9UBT6 870 aa30.31■■■□□ 2.44
CROT-202ENST00000412227 SPG7Q9UQ90 795 aa30.31■■■□□ 2.44
CROT-202ENST00000412227 PALLDQ8WX93 1383 aa30.3■■■□□ 2.44
CROT-202ENST00000412227 EYA1Q99502 592 aa30.3■■■□□ 2.44
CROT-202ENST00000412227 HMGB2P26583 209 aaKnown RBP30.29■■■□□ 2.44
CROT-202ENST00000412227 TNNT2P45379 298 aaPredicted RBP30.29■■■□□ 2.44
CROT-202ENST00000412227 HSPA5P11021 654 aaKnown RBP30.28■■■□□ 2.44
CROT-202ENST00000412227 COL23A1Q86Y22 540 aaPredicted RBP30.28■■■□□ 2.44
CROT-202ENST00000412227 SMARCC1Q92922 1105 aaPredicted RBP30.27■■■□□ 2.44
CROT-202ENST00000412227 GPR162Q16538 588 aa30.26■■■□□ 2.43
CROT-202ENST00000412227 NKX1-1Q15270 411 aaPredicted RBP30.25■■■□□ 2.43
CROT-202ENST00000412227 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
CROT-202ENST00000412227 PIGBQ92521 554 aa30.23■■■□□ 2.43
CROT-202ENST00000412227 PANK3Q9H999 370 aa30.23■■■□□ 2.43
CROT-202ENST00000412227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.23■■■□□ 2.43
CROT-202ENST00000412227 UTRNP46939 3433 aa30.22■■■□□ 2.43
CROT-202ENST00000412227 EIF4A2Q14240 407 aaKnown RBP30.22■■■□□ 2.43
CROT-202ENST00000412227 FLAD1Q8NFF5 587 aa30.21■■■□□ 2.43
CROT-202ENST00000412227 C4BP0C0L5 1744 aa30.21■■■□□ 2.43
CROT-202ENST00000412227 MSL1Q68DK7 614 aa30.2■■■□□ 2.43
CROT-202ENST00000412227 ZNF784Q8NCA9 323 aaPredicted RBP30.2■■■□□ 2.43
CROT-202ENST00000412227 IFNL2Q8IZJ0 200 aa30.19■■■□□ 2.42
CROT-202ENST00000412227 PELP1Q8IZL8 1130 aaKnown RBP30.19■■■□□ 2.42
CROT-202ENST00000412227 NLGN2Q8NFZ4 835 aa30.18■■■□□ 2.42
CROT-202ENST00000412227 AK7Q96M32 723 aa30.18■■■□□ 2.42
CROT-202ENST00000412227 TMOD3Q9NYL9 352 aa30.18■■■□□ 2.42
CROT-202ENST00000412227 UBR3Q6ZT12 1888 aa30.17■■■□□ 2.42
CROT-202ENST00000412227 PHKG2P15735 406 aa30.16■■■□□ 2.42
CROT-202ENST00000412227 LOC102724428A0A0B4J2F2 783 aa30.13■■■□□ 2.41
CROT-202ENST00000412227 SIK1P57059 783 aa30.13■■■□□ 2.41
CROT-202ENST00000412227 ASAP1Q9ULH1 1129 aa30.12■■■□□ 2.41
CROT-202ENST00000412227 IGSF1Q8N6C5 1336 aa30.12■■■□□ 2.41
CROT-202ENST00000412227 MORC1Q86VD1 984 aa30.11■■■□□ 2.41
CROT-202ENST00000412227 PHF14O94880 888 aa30.1■■■□□ 2.41
CROT-202ENST00000412227 PLEKHG2Q9H7P9 1386 aa30.1■■■□□ 2.41
CROT-202ENST00000412227 AMIGO3Q86WK7 504 aa30.08■■■□□ 2.41
CROT-202ENST00000412227 LINC00116Q8NCU8 138 aa30.08■■■□□ 2.41
CROT-202ENST00000412227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.07■■■□□ 2.4
CROT-202ENST00000412227 ATP6V1AP38606 617 aa30.07■■■□□ 2.4
CROT-202ENST00000412227 SMIM5Q71RC9 77 aa30.07■■■□□ 2.4
CROT-202ENST00000412227 PLEKHO1Q53GL0 409 aaPredicted RBP30.06■■■□□ 2.4
CROT-202ENST00000412227 ATG3Q9NT62 314 aa30.06■■■□□ 2.4
CROT-202ENST00000412227 KNSTRNQ9Y448 316 aa30.06■■■□□ 2.4
CROT-202ENST00000412227 SSFA2P28290 1259 aa30.05■■■□□ 2.4
CROT-202ENST00000412227 ITPK1Q13572 414 aa30.04■■■□□ 2.4
CROT-202ENST00000412227 CD2APQ9Y5K6 639 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms