RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 NBPF6Q5VWK0 638 aa11.1□□□□□ -0.63
RPE-204ENST00000411934 FAM196AQ6ZSG2 479 aa11.1□□□□□ -0.63
RPE-204ENST00000411934 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
RPE-204ENST00000411934 NBPF4Q96M43 638 aa11.1□□□□□ -0.63
RPE-204ENST00000411934 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
RPE-204ENST00000411934 RGPD3A6NKT7 1758 aaPredicted RBP11.09□□□□□ -0.63
RPE-204ENST00000411934 RGPD4Q7Z3J3 1758 aa11.09□□□□□ -0.63
RPE-204ENST00000411934 EXOC5O00471 708 aa11.09□□□□□ -0.63
RPE-204ENST00000411934 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
RPE-204ENST00000411934 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
RPE-204ENST00000411934 CFAP53Q96M91 514 aa11.09□□□□□ -0.63
RPE-204ENST00000411934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■□□□ 14.3
RPE-204ENST00000411934 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
RPE-204ENST00000411934 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPE-204ENST00000411934 EYA1Q99502 592 aa11.08□□□□□ -0.64
RPE-204ENST00000411934 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
RPE-204ENST00000411934 EP400Q96L91 3159 aa11.08□□□□□ -0.64
RPE-204ENST00000411934 PCDH11XQ9BZA7 1347 aa11.08□□□□□ -0.64
RPE-204ENST00000411934 PCDH11YQ9BZA8 1340 aa11.08□□□□□ -0.64
RPE-204ENST00000411934 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
RPE-204ENST00000411934 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
RPE-204ENST00000411934 IL13P35225 146 aa11.07□□□□□ -0.64
RPE-204ENST00000411934 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
RPE-204ENST00000411934 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
RPE-204ENST00000411934 ZCRB1Q8TBF4 217 aaKnown RBP11.06□□□□□ -0.64
RPE-204ENST00000411934 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
RPE-204ENST00000411934 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
RPE-204ENST00000411934 NUDCQ9Y266 331 aa11.05□□□□□ -0.64
RPE-204ENST00000411934 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
RPE-204ENST00000411934 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
RPE-204ENST00000411934 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
RPE-204ENST00000411934 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
RPE-204ENST00000411934 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
RPE-204ENST00000411934 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
RPE-204ENST00000411934 PRKRIP1Q9H875 184 aaPredicted RBP11.03□□□□□ -0.64
RPE-204ENST00000411934 DOT1LQ8TEK3 1739 aa11.02□□□□□ -0.65
RPE-204ENST00000411934 BAG6P46379 1132 aa11.02□□□□□ -0.65
RPE-204ENST00000411934 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
RPE-204ENST00000411934 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
RPE-204ENST00000411934 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
RPE-204ENST00000411934 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
RPE-204ENST00000411934 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
RPE-204ENST00000411934 RREB1Q92766 1687 aa11.01□□□□□ -0.65
RPE-204ENST00000411934 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
RPE-204ENST00000411934 ADAMTS7Q9UKP4 1686 aa10.99□□□□□ -0.65
RPE-204ENST00000411934 PLSCR1O15162 318 aa10.99□□□□□ -0.65
RPE-204ENST00000411934 FCHSD2O94868 740 aa10.99□□□□□ -0.65
RPE-204ENST00000411934 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 BTAF1O14981 1849 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 CYP27B1O15528 508 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 TRIM37O94972 964 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 PHKG2P15735 406 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 HMGB2P26583 209 aaKnown RBP10.98□□□□□ -0.65
RPE-204ENST00000411934 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 AEBP1Q8IUX7 1158 aa10.98□□□□□ -0.65
RPE-204ENST00000411934 DDX54Q8TDD1 881 aaKnown RBP10.98□□□□□ -0.65
RPE-204ENST00000411934 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
RPE-204ENST00000411934 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
RPE-204ENST00000411934 CNGB1Q14028 1251 aaPredicted RBP10.97□□□□□ -0.65
RPE-204ENST00000411934 GAS2L2Q8NHY3 880 aa10.97□□□□□ -0.65
RPE-204ENST00000411934 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
RPE-204ENST00000411934 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
RPE-204ENST00000411934 MRC1P22897 1456 aa10.97□□□□□ -0.65
RPE-204ENST00000411934 SCN11AQ9UI33 1791 aa10.96□□□□□ -0.65
RPE-204ENST00000411934 ANP32CO43423 234 aa10.96□□□□□ -0.65
RPE-204ENST00000411934 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.65
RPE-204ENST00000411934 C1orf141Q5JVX7 400 aa10.96□□□□□ -0.65
RPE-204ENST00000411934 ZNF530Q6P9A1 599 aaPredicted RBP10.96□□□□□ -0.65
RPE-204ENST00000411934 ITGB4P16144 1822 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 LY75O60449 1722 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 NUP188Q5SRE5 1749 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 ERVV-2B6SEH9 535 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 APBA3O96018 575 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 NEFMP07197 916 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 HMOX1P09601 288 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
RPE-204ENST00000411934 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPE-204ENST00000411934 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 ZNF831Q5JPB2 1677 aa10.95□□□□□ -0.66
RPE-204ENST00000411934 KDM6AO15550 1401 aaPredicted RBP10.94□□□□□ -0.66
RPE-204ENST00000411934 CICQ96RK0 1608 aaPredicted RBP10.94□□□□□ -0.66
RPE-204ENST00000411934 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
RPE-204ENST00000411934 PRKAR2BP31323 418 aa10.93□□□□□ -0.66
RPE-204ENST00000411934 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
RPE-204ENST00000411934 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
RPE-204ENST00000411934 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
RPE-204ENST00000411934 KCNQ2O43526 872 aa10.92□□□□□ -0.66
RPE-204ENST00000411934 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
RPE-204ENST00000411934 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
RPE-204ENST00000411934 SLC27A3Q5K4L6 730 aa10.92□□□□□ -0.66
RPE-204ENST00000411934 DEFB132Q7Z7B7 95 aa10.92□□□□□ -0.66
RPE-204ENST00000411934 ACSBG1Q96GR2 724 aa10.92□□□□□ -0.66
RPE-204ENST00000411934 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
RPE-204ENST00000411934 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
RPE-204ENST00000411934 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
RPE-204ENST00000411934 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
RPE-204ENST00000411934 MTHFSDQ2M296 383 aaKnown RBP10.91□□□□□ -0.66
RPE-204ENST00000411934 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
RPE-204ENST00000411934 KAT6BQ8WYB5 2073 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms