RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 INSRP06213 1382 aa13.89□□□□□ -0.19
PKP4-203ENST00000411900 FLT4P35916 1363 aa13.89□□□□□ -0.19
PKP4-203ENST00000411900 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
PKP4-203ENST00000411900 CGNL1Q0VF96 1302 aa13.89□□□□□ -0.19
PKP4-203ENST00000411900 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
PKP4-203ENST00000411900 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
PKP4-203ENST00000411900 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
PKP4-203ENST00000411900 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
PKP4-203ENST00000411900 RAPGEF4Q8WZA2 1011 aa13.87□□□□□ -0.19
PKP4-203ENST00000411900 PANK3Q9H999 370 aa13.87□□□□□ -0.19
PKP4-203ENST00000411900 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
PKP4-203ENST00000411900 STK32BQ9NY57 414 aa13.86□□□□□ -0.19
PKP4-203ENST00000411900 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
PKP4-203ENST00000411900 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
PKP4-203ENST00000411900 ZBTB7AO95365 584 aa13.84□□□□□ -0.19
PKP4-203ENST00000411900 KCNQ4P56696 695 aa13.84□□□□□ -0.19
PKP4-203ENST00000411900 SLC15A2Q16348 729 aa13.84□□□□□ -0.19
PKP4-203ENST00000411900 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
PKP4-203ENST00000411900 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
PKP4-203ENST00000411900 PAPPAQ13219 1627 aa13.83□□□□□ -0.2
PKP4-203ENST00000411900 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
PKP4-203ENST00000411900 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
PKP4-203ENST00000411900 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
PKP4-203ENST00000411900 NSD2O96028 1365 aa13.82□□□□□ -0.2
PKP4-203ENST00000411900 LY75O60449 1722 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
PKP4-203ENST00000411900 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 EYA1Q99502 592 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
PKP4-203ENST00000411900 ITGB4P16144 1822 aa13.8□□□□□ -0.2
PKP4-203ENST00000411900 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
PKP4-203ENST00000411900 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
PKP4-203ENST00000411900 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
PKP4-203ENST00000411900 CYP27B1O15528 508 aa13.79□□□□□ -0.2
PKP4-203ENST00000411900 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
PKP4-203ENST00000411900 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
PKP4-203ENST00000411900 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
PKP4-203ENST00000411900 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
PKP4-203ENST00000411900 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
PKP4-203ENST00000411900 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
PKP4-203ENST00000411900 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
PKP4-203ENST00000411900 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
PKP4-203ENST00000411900 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
PKP4-203ENST00000411900 QSER1Q2KHR3 1735 aa13.76□□□□□ -0.21
PKP4-203ENST00000411900 PTGER2P43116 358 aa13.75□□□□□ -0.21
PKP4-203ENST00000411900 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
PKP4-203ENST00000411900 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
PKP4-203ENST00000411900 C5P01031 1676 aa13.75□□□□□ -0.21
PKP4-203ENST00000411900 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
PKP4-203ENST00000411900 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
PKP4-203ENST00000411900 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
PKP4-203ENST00000411900 PALLDQ8WX93 1383 aa13.72□□□□□ -0.21
PKP4-203ENST00000411900 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
PKP4-203ENST00000411900 IGSF1Q8N6C5 1336 aa13.72□□□□□ -0.21
PKP4-203ENST00000411900 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
PKP4-203ENST00000411900 MSH5O43196 834 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 PHKG2P15735 406 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 CC2D1BQ5T0F9 858 aaKnown RBP13.71□□□□□ -0.21
PKP4-203ENST00000411900 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 PIGBQ92521 554 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
PKP4-203ENST00000411900 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
PKP4-203ENST00000411900 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
PKP4-203ENST00000411900 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
PKP4-203ENST00000411900 ARXQ96QS3 562 aa13.69□□□□□ -0.22
PKP4-203ENST00000411900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.22
PKP4-203ENST00000411900 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
PKP4-203ENST00000411900 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
PKP4-203ENST00000411900 SULT6B1Q6IMI4 303 aa13.68□□□□□ -0.22
PKP4-203ENST00000411900 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
PKP4-203ENST00000411900 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
PKP4-203ENST00000411900 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
PKP4-203ENST00000411900 DCAF8L1A6NGE4 600 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
PKP4-203ENST00000411900 IL13P35225 146 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 MTHFSP49914 203 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
PKP4-203ENST00000411900 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
PKP4-203ENST00000411900 SMIM5Q71RC9 77 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
PKP4-203ENST00000411900 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
PKP4-203ENST00000411900 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
PKP4-203ENST00000411900 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 PHF14O94880 888 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 POLD1P28340 1107 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 SIK1P57059 783 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
PKP4-203ENST00000411900 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
PKP4-203ENST00000411900 HMOX1P09601 288 aa13.64□□□□□ -0.23
PKP4-203ENST00000411900 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
PKP4-203ENST00000411900 AK7Q96M32 723 aa13.64□□□□□ -0.23
PKP4-203ENST00000411900 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
PKP4-203ENST00000411900 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
PKP4-203ENST00000411900 YY1P25490 414 aa13.63□□□□□ -0.23
PKP4-203ENST00000411900 ATP6V1AP38606 617 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms