RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-210ENST00000409954 FLT4P35916 1363 aa20.07■□□□□ 0.8
MCF2L-210ENST00000409954 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
MCF2L-210ENST00000409954 PTGER2P43116 358 aa20.05■□□□□ 0.8
MCF2L-210ENST00000409954 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
MCF2L-210ENST00000409954 SLC16A10Q8TF71 515 aa20.04■□□□□ 0.8
MCF2L-210ENST00000409954 NSD3Q9BZ95 1437 aa20.03■□□□□ 0.8
MCF2L-210ENST00000409954 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
MCF2L-210ENST00000409954 EMILIN1Q9Y6C2 1016 aa20.03■□□□□ 0.8
MCF2L-210ENST00000409954 FAM208AQ9UK61 1670 aaKnown RBP20.03■□□□□ 0.8
MCF2L-210ENST00000409954 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
MCF2L-210ENST00000409954 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
MCF2L-210ENST00000409954 AKT1S1Q96B36 256 aa20.02■□□□□ 0.8
MCF2L-210ENST00000409954 NHSQ6T4R5 1651 aa20.02■□□□□ 0.8
MCF2L-210ENST00000409954 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
MCF2L-210ENST00000409954 PCDH11XQ9BZA7 1347 aa20■□□□□ 0.79
MCF2L-210ENST00000409954 PCDH11YQ9BZA8 1340 aa20■□□□□ 0.79
MCF2L-210ENST00000409954 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 MEGF6O75095 1541 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 SGIP1Q9BQI5 828 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 TFCP2L1Q9NZI6 479 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
MCF2L-210ENST00000409954 SYT17Q9BSW7 474 aa19.98■□□□□ 0.79
MCF2L-210ENST00000409954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.98■□□□□ 0.792e-10■□□□□ 9.3
MCF2L-210ENST00000409954 SPG7Q9UQ90 795 aa19.98■□□□□ 0.79
MCF2L-210ENST00000409954 ARXQ96QS3 562 aa19.97■□□□□ 0.79
MCF2L-210ENST00000409954 CCNL1Q9UK58 526 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-210ENST00000409954 CYP27B1O15528 508 aa19.96■□□□□ 0.79
MCF2L-210ENST00000409954 EYA1Q99502 592 aa19.96■□□□□ 0.79
MCF2L-210ENST00000409954 PANK3Q9H999 370 aa19.96■□□□□ 0.79
MCF2L-210ENST00000409954 NSD2O96028 1365 aa19.95■□□□□ 0.79
MCF2L-210ENST00000409954 YY1P25490 414 aa19.95■□□□□ 0.78
MCF2L-210ENST00000409954 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
MCF2L-210ENST00000409954 FHDC1Q9C0D6 1143 aaPredicted RBP19.95■□□□□ 0.78
MCF2L-210ENST00000409954 CASZ1Q86V15 1759 aa19.94■□□□□ 0.78
MCF2L-210ENST00000409954 KCNQ4P56696 695 aa19.94■□□□□ 0.78
MCF2L-210ENST00000409954 SMARCC1Q92922 1105 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-210ENST00000409954 BTAF1O14981 1849 aa19.94■□□□□ 0.78
MCF2L-210ENST00000409954 POLD1P28340 1107 aa19.93■□□□□ 0.78
MCF2L-210ENST00000409954 MPRIPQ6WCQ1 1025 aa19.93■□□□□ 0.78
MCF2L-210ENST00000409954 PNPLA7Q6ZV29 1317 aa19.92■□□□□ 0.78
MCF2L-210ENST00000409954 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-210ENST00000409954 FLAD1Q8NFF5 587 aa19.91■□□□□ 0.78
MCF2L-210ENST00000409954 IFNL2Q8IZJ0 200 aa19.9■□□□□ 0.78
MCF2L-210ENST00000409954 EIF4A2Q14240 407 aaKnown RBP19.89■□□□□ 0.77
MCF2L-210ENST00000409954 KNSTRNQ9Y448 316 aa19.89■□□□□ 0.77
MCF2L-210ENST00000409954 KIF20BQ96Q89 1820 aa19.88■□□□□ 0.77
MCF2L-210ENST00000409954 RGPD2P0DJD1 1756 aa19.88■□□□□ 0.77
MCF2L-210ENST00000409954 NCAPD2Q15021 1401 aa19.88■□□□□ 0.77
MCF2L-210ENST00000409954 MORC1Q86VD1 984 aa19.88■□□□□ 0.77
MCF2L-210ENST00000409954 PIGBQ92521 554 aa19.88■□□□□ 0.77
MCF2L-210ENST00000409954 PAPPAQ13219 1627 aa19.87■□□□□ 0.77
MCF2L-210ENST00000409954 MAP3K5Q99683 1374 aa19.87■□□□□ 0.77
MCF2L-210ENST00000409954 MSH5O43196 834 aa19.87■□□□□ 0.77
MCF2L-210ENST00000409954 MYOM1P52179 1685 aa19.87■□□□□ 0.77
MCF2L-210ENST00000409954 COL23A1Q86Y22 540 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-210ENST00000409954 PALLDQ8WX93 1383 aa19.85■□□□□ 0.77
MCF2L-210ENST00000409954 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
MCF2L-210ENST00000409954 PHKG2P15735 406 aa19.85■□□□□ 0.77
MCF2L-210ENST00000409954 PLEKHO1Q53GL0 409 aaPredicted RBP19.84■□□□□ 0.77
MCF2L-210ENST00000409954 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
MCF2L-210ENST00000409954 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.77
MCF2L-210ENST00000409954 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
MCF2L-210ENST00000409954 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
MCF2L-210ENST00000409954 ERVV-2B6SEH9 535 aa19.81■□□□□ 0.76
MCF2L-210ENST00000409954 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
MCF2L-210ENST00000409954 SHANK3Q9BYB0 1731 aa19.81■□□□□ 0.76
MCF2L-210ENST00000409954 LOC102724428A0A0B4J2F2 783 aa19.8■□□□□ 0.76
MCF2L-210ENST00000409954 SIK1P57059 783 aa19.8■□□□□ 0.76
MCF2L-210ENST00000409954 GPR162Q16538 588 aa19.8■□□□□ 0.76
MCF2L-210ENST00000409954 AK7Q96M32 723 aa19.8■□□□□ 0.76
MCF2L-210ENST00000409954 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
MCF2L-210ENST00000409954 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
MCF2L-210ENST00000409954 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
MCF2L-210ENST00000409954 LY75O60449 1722 aa19.79■□□□□ 0.76
MCF2L-210ENST00000409954 ASAP1Q9ULH1 1129 aa19.78■□□□□ 0.76
MCF2L-210ENST00000409954 ATP6V1AP38606 617 aa19.77■□□□□ 0.76
MCF2L-210ENST00000409954 ATG3Q9NT62 314 aa19.77■□□□□ 0.76
MCF2L-210ENST00000409954 SSFA2P28290 1259 aa19.76■□□□□ 0.75
MCF2L-210ENST00000409954 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
MCF2L-210ENST00000409954 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
MCF2L-210ENST00000409954 QSER1Q2KHR3 1735 aa19.75■□□□□ 0.75
MCF2L-210ENST00000409954 KIF7Q2M1P5 1343 aa19.75■□□□□ 0.75
MCF2L-210ENST00000409954 ANKRD26Q9UPS8 1709 aa19.74■□□□□ 0.75
MCF2L-210ENST00000409954 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-210ENST00000409954 IL13P35225 146 aa19.74■□□□□ 0.75
MCF2L-210ENST00000409954 MTHFSP49914 203 aa19.74■□□□□ 0.75
MCF2L-210ENST00000409954 C1orf141Q5JVX7 400 aa19.74■□□□□ 0.75
MCF2L-210ENST00000409954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
MCF2L-210ENST00000409954 GRIN3BO60391 1043 aa19.73■□□□□ 0.75
MCF2L-210ENST00000409954 CABP4P57796 275 aa19.73■□□□□ 0.75
MCF2L-210ENST00000409954 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
MCF2L-210ENST00000409954 SULT6B1Q6IMI4 303 aa19.73■□□□□ 0.75
MCF2L-210ENST00000409954 ZNF530Q6P9A1 599 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-210ENST00000409954 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
MCF2L-210ENST00000409954 LINC00116Q8NCU8 138 aa19.72■□□□□ 0.75
MCF2L-210ENST00000409954 ITPK1Q13572 414 aa19.71■□□□□ 0.75
MCF2L-210ENST00000409954 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
MCF2L-210ENST00000409954 PHF14O94880 888 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms