RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 CCDC112Q8NEF3 446 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 PHAXQ9H814 394 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 AS3MTQ9HBK9 375 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 NOL7Q9UMY1 257 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ABCC11Q96J66 1382 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 PTMAP06454 111 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ODF2Q5BJF6 829 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 STXBP4Q6ZWJ1 553 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 GBP4Q96PP9 640 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 MTIF3Q9H2K0 278 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 RNF41Q9H4P4 317 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 SPC25Q9HBM1 224 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 SHANK2Q9UPX8 1470 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 MAP3K5Q99683 1374 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 URB2Q14146 1524 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 UQCRFS1P1P0C7P4 283 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 ALDH1B1P30837 517 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 TNNT3P45378 269 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 MMP14P50281 582 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 GPR162Q16538 588 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 TPD52L1Q16890 204 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC27Q2M243 656 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC117Q8IWD4 279 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC82Q8N4S0 544 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 FAM184AQ8NB25 1140 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CDK5RAP3Q96JB5 506 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 PYM1Q9BRP8 204 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 C22orf23Q9BZE7 217 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 CHMP5Q9NZZ3 219 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 RTCBQ9Y3I0 505 aaKnown RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 USP37Q86T82 979 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 TSPYL2Q9H2G4 693 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 BMP2KQ9NSY1 1161 aaPredicted RBP2.51□□□□□ -2.01
SCN7A-201ENST00000409855 HAUS2Q9NVX0 235 aa2.51□□□□□ -2.01
SCN7A-201ENST00000409855 NPATQ14207 1427 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 RAD21O60216 631 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 DKC1O60832 514 aaKnown RBP eCLIP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 UBTFL1P0CB47 393 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 IL2RBP14784 551 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 DDX10Q13206 875 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TMED8Q6PL24 325 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 HOOK3Q86VS8 718 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 LUC7LQ9NQ29 371 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 ADAMTS12P58397 1594 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 NPHP4O75161 1426 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 HOXD10P28358 340 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 NT5C2P49902 561 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 LARP1Q6PKG0 1096 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 AFAP1Q8N556 730 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 BABAM1Q9NWV8 329 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 UGGT2Q9NYU1 1516 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 ABCA8O94911 1581 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 H3BQV1 296 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 WASLO00401 505 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 APPP05067 770 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 CASTP20810 708 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 SF3A1Q15459 793 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 IFFO2Q5TF58 517 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TPTE2Q6XPS3 522 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TRIM22Q8IYM9 498 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 PAF1Q8N7H5 531 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 CERKQ8TCT0 537 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 CNKSR1Q969H4 720 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 C8orf37Q96NL8 207 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 PRAM1Q96QH2 718 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 RAB34Q9BZG1 259 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 SRCIN1Q9C0H9 1055 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TFCP2L1Q9NZI6 479 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 USP47Q96K76 1375 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 ANKRD18BA2A2Z9 1011 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 PPP1R12BO60237 982 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 HSPA5P11021 654 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 FKBP5Q13451 457 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 SYCP1Q15431 976 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TRAPPC3LQ5T215 181 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 CDC37L1Q7L3B6 337 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 GLT8D2Q9H1C3 349 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 HYPKQ9NX55 129 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 RTEL1Q9NZ71 1219 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TMOD4Q9NZQ9 345 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 USP21Q9UK80 565 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 SUPT6HQ7KZ85 1726 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 PRXQ9BXM0 1461 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 KDM5BQ9UGL1 1544 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 ADAMTS2O95450 1211 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 PDE3AQ14432 1141 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 DCAF15Q66K64 600 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 MCTP2Q6DN12 878 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 ZSCAN29Q8IWY8 852 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 TCP11L2Q8N4U5 519 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 NUDT16Q96DE0 195 aaKnown RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 FEZ1Q99689 392 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 FERMT1Q9BQL6 677 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 DACH1Q9UI36 760 aa2.5□□□□□ -2.01
SCN7A-201ENST00000409855 U3KPZ7 1027 aaPredicted RBP2.5□□□□□ -2.01
SCN7A-201ENST00000409855 NEBLO76041 1014 aa2.49□□□□□ -2.01
SCN7A-201ENST00000409855 CCDC173Q0VFZ6 552 aa2.49□□□□□ -2.01
SCN7A-201ENST00000409855 ANKRD1Q15327 319 aa2.49□□□□□ -2.01
SCN7A-201ENST00000409855 CT47A1Q5JQC4 288 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms