RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 OVOS2A0A0G2JMS6 1433 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 GNAI1P63096 354 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 TSR2Q969E8 191 aaKnown RBP7.16□□□□□ -1.26
EPHA4-202ENST00000409854 PPP4R2Q9NY27 417 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 RARSP54136 660 aaKnown RBP7.16□□□□□ -1.26
EPHA4-202ENST00000409854 LTV1Q96GA3 475 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-202ENST00000409854 CFAP44Q96MT7 982 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 MAP3K5Q99683 1374 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 COL5A2P05997 1499 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-202ENST00000409854 NRAPQ86VF7 1730 aa7.16□□□□□ -1.26
EPHA4-202ENST00000409854 FAM83GA6ND36 823 aa7.15□□□□□ -1.26
EPHA4-202ENST00000409854 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
EPHA4-202ENST00000409854 CABLES1Q8TDN4 633 aa7.15□□□□□ -1.26
EPHA4-202ENST00000409854 THUMPD2Q9BTF0 503 aaKnown RBP7.15□□□□□ -1.26
EPHA4-202ENST00000409854 N4BP2Q86UW6 1770 aaPredicted RBP7.15□□□□□ -1.27
EPHA4-202ENST00000409854 EXOSC9Q06265 439 aaKnown RBP7.15□□□□□ -1.27
EPHA4-202ENST00000409854 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.27
EPHA4-202ENST00000409854 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.15□□□□□ -1.27
EPHA4-202ENST00000409854 LRRC59Q96AG4 307 aaKnown RBP7.15□□□□□ -1.27
EPHA4-202ENST00000409854 CEMIPQ8WUJ3 1361 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 BCAR3O75815 825 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 MBIPQ9NS73 344 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 NWD2Q9ULI1 1742 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 ZNF428Q96B54 188 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 MEGF6O75095 1541 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 GNAT3A8MTJ3 354 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 CHL1O00533 1208 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 PLIN1O60240 522 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 DCTN1Q14203 1278 aa7.14□□□□□ -1.27
EPHA4-202ENST00000409854 BRPF1P55201 1214 aaPredicted RBP7.13□□□□□ -1.27
EPHA4-202ENST00000409854 MCM10Q7L590 875 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 MRC1P22897 1456 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 ALDH1L2Q3SY69 923 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 AMOTQ4VCS5 1084 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 C20orf194Q5TEA3 1177 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 BABAM1Q9NWV8 329 aa7.13□□□□□ -1.27
EPHA4-202ENST00000409854 EXOC6Q8TAG9 804 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 WDR17Q8IZU2 1322 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 PAPPAQ13219 1627 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 PLEKHG5O94827 1062 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 CHRNA2Q15822 529 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 AKAP4Q5JQC9 854 aa7.12□□□□□ -1.27
EPHA4-202ENST00000409854 RTF1Q92541 710 aaKnown RBP7.12□□□□□ -1.27
EPHA4-202ENST00000409854 VAMP4O75379 141 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 PLEKHO1Q53GL0 409 aaPredicted RBP7.11□□□□□ -1.27
EPHA4-202ENST00000409854 IL17REQ8NFR9 667 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.11□□□□□ -1.27
EPHA4-202ENST00000409854 SSH1Q8WYL5 1049 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 PRDM11Q9NQV5 511 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 LAS1LQ9Y4W2 734 aaKnown RBP7.11□□□□□ -1.27
EPHA4-202ENST00000409854 UBR2Q8IWV8 1755 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 UBE2Q2Q8WVN8 375 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 ARXQ96QS3 562 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 TOGARAM1Q9Y4F4 1720 aa7.11□□□□□ -1.27
EPHA4-202ENST00000409854 TOM1O60784 492 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 TSPYL6Q8N831 410 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 LAMB4A4D0S4 1761 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 KIF16BQ96L93 1317 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-202ENST00000409854 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 ANP32EQ9BTT0 268 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 C5P01031 1676 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 KDM6AO15550 1401 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-202ENST00000409854 SOS1Q07889 1333 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-202ENST00000409854 ZNF530Q6P9A1 599 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-202ENST00000409854 SMC4Q9NTJ3 1288 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 NLRP2Q9NX02 1062 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 GLI3P10071 1580 aa7.1□□□□□ -1.27
EPHA4-202ENST00000409854 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.27
EPHA4-202ENST00000409854 TATP17735 454 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-202ENST00000409854 HAP1P54257 671 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-202ENST00000409854 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
EPHA4-202ENST00000409854 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
EPHA4-202ENST00000409854 MRPL50Q8N5N7 158 aaKnown RBP7.09□□□□□ -1.27
EPHA4-202ENST00000409854 RAPGEF4Q8WZA2 1011 aa7.09□□□□□ -1.27
EPHA4-202ENST00000409854 CARD10Q9BWT7 1032 aa7.09□□□□□ -1.27
EPHA4-202ENST00000409854 BCL2L13Q9BXK5 485 aa7.09□□□□□ -1.27
EPHA4-202ENST00000409854 ITGB4P16144 1822 aa7.09□□□□□ -1.28
EPHA4-202ENST00000409854 CSB-PGBD3P0DP91 1061 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 TAF7Q15545 349 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-202ENST00000409854 LRP6O75581 1613 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 DISP2A7MBM2 1401 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 RNMTO43148 476 aaKnown RBP7.08□□□□□ -1.28
EPHA4-202ENST00000409854 MS4A1P11836 297 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 AAMPQ13685 434 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 ARHGAP45Q92619 1136 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 TSPYL4Q9UJ04 414 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 RLBP1P12271 317 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 C1orf141Q5JVX7 400 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 CCDC136Q96JN2 1154 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 LGR6Q9HBX8 967 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
EPHA4-202ENST00000409854 RGS12O14924 1447 aa7.07□□□□□ -1.28
EPHA4-202ENST00000409854 TRIM27P14373 513 aa7.07□□□□□ -1.28
EPHA4-202ENST00000409854 PHKG2P15735 406 aa7.07□□□□□ -1.28
EPHA4-202ENST00000409854 CANXP27824 592 aaKnown RBP7.07□□□□□ -1.28
EPHA4-202ENST00000409854 ATF7IPQ6VMQ6 1270 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms