RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 CARD10Q9BWT7 1032 aa12.76□□□□□ -0.37
RPE-203ENST00000408981 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
RPE-203ENST00000408981 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
RPE-203ENST00000408981 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
RPE-203ENST00000408981 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
RPE-203ENST00000408981 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
RPE-203ENST00000408981 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 TGFB2P61812 414 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 DGKZQ13574 1117 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 NLRP13Q86W25 1043 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 COL18A1P39060 1754 aa12.73□□□□□ -0.37
RPE-203ENST00000408981 ABCC6O95255 1503 aa12.72□□□□□ -0.37
RPE-203ENST00000408981 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
RPE-203ENST00000408981 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
RPE-203ENST00000408981 SMIM5Q71RC9 77 aa12.72□□□□□ -0.37
RPE-203ENST00000408981 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
RPE-203ENST00000408981 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
RPE-203ENST00000408981 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
RPE-203ENST00000408981 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
RPE-203ENST00000408981 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
RPE-203ENST00000408981 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
RPE-203ENST00000408981 NBPF15Q8N660 670 aa12.7□□□□□ -0.38
RPE-203ENST00000408981 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
RPE-203ENST00000408981 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
RPE-203ENST00000408981 ZC3H4Q9UPT8 1303 aaKnown RBP12.69□□□□□ -0.38
RPE-203ENST00000408981 DPEP1P16444 411 aa12.69□□□□□ -0.38
RPE-203ENST00000408981 FXR1P51114 621 aaKnown RBP eCLIP12.69□□□□□ -0.38
RPE-203ENST00000408981 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
RPE-203ENST00000408981 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
RPE-203ENST00000408981 WDR33Q9C0J8 1336 aaKnown RBP12.68□□□□□ -0.38
RPE-203ENST00000408981 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
RPE-203ENST00000408981 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
RPE-203ENST00000408981 SPATA31E1Q6ZUB1 1445 aa12.68□□□□□ -0.38
RPE-203ENST00000408981 ERBB3P21860 1342 aa12.66□□□□□ -0.38
RPE-203ENST00000408981 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
RPE-203ENST00000408981 PHF14O94880 888 aa12.66□□□□□ -0.38
RPE-203ENST00000408981 LY75O60449 1722 aa12.65□□□□□ -0.38
RPE-203ENST00000408981 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
RPE-203ENST00000408981 POTECB2RU33 542 aa12.65□□□□□ -0.38
RPE-203ENST00000408981 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
RPE-203ENST00000408981 DCAF5Q96JK2 942 aa12.65□□□□□ -0.38
RPE-203ENST00000408981 ACEP12821 1306 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 MMP10P09238 476 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
RPE-203ENST00000408981 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
RPE-203ENST00000408981 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
RPE-203ENST00000408981 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
RPE-203ENST00000408981 IL2RBP14784 551 aa12.63□□□□□ -0.39
RPE-203ENST00000408981 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
RPE-203ENST00000408981 DALRD3Q5D0E6 543 aaKnown RBP12.63□□□□□ -0.39
RPE-203ENST00000408981 AK7Q96M32 723 aa12.63□□□□□ -0.39
RPE-203ENST00000408981 MPNDQ8N594 471 aa12.62□□□□□ -0.39
RPE-203ENST00000408981 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
RPE-203ENST00000408981 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
RPE-203ENST00000408981 POLR3AO14802 1390 aaPredicted RBP12.61□□□□□ -0.39
RPE-203ENST00000408981 USP47Q96K76 1375 aa12.61□□□□□ -0.39
RPE-203ENST00000408981 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
RPE-203ENST00000408981 RASSF7Q02833 373 aa12.61□□□□□ -0.39
RPE-203ENST00000408981 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
RPE-203ENST00000408981 GRM1Q13255 1194 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
RPE-203ENST00000408981 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
RPE-203ENST00000408981 ABT1Q9ULW3 272 aaKnown RBP12.6□□□□□ -0.39
RPE-203ENST00000408981 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
RPE-203ENST00000408981 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
RPE-203ENST00000408981 LMNB1P20700 586 aa12.59□□□□□ -0.39
RPE-203ENST00000408981 NLRP6P59044 892 aa12.59□□□□□ -0.39
RPE-203ENST00000408981 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
RPE-203ENST00000408981 NSD2O96028 1365 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 ROCK1Q13464 1354 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 C5P01031 1676 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 KCNA3P22001 575 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
RPE-203ENST00000408981 SBF1O95248 1867 aa12.57□□□□□ -0.4
RPE-203ENST00000408981 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
RPE-203ENST00000408981 GPR101Q96P66 508 aaPredicted RBP12.57□□□□□ -0.4
RPE-203ENST00000408981 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
RPE-203ENST00000408981 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
RPE-203ENST00000408981 CAPNS2Q96L46 248 aa12.56□□□□□ -0.4
RPE-203ENST00000408981 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
RPE-203ENST00000408981 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
RPE-203ENST00000408981 SLIT3O75094 1523 aa12.56□□□□□ -0.4
RPE-203ENST00000408981 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
RPE-203ENST00000408981 LTBP1Q14766 1721 aa12.55□□□□□ -0.4
RPE-203ENST00000408981 CA12O43570 354 aa12.55□□□□□ -0.4
RPE-203ENST00000408981 ECE1P42892 770 aa12.55□□□□□ -0.4
RPE-203ENST00000408981 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
RPE-203ENST00000408981 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
RPE-203ENST00000408981 SOX12O15370 315 aa12.54□□□□□ -0.4
RPE-203ENST00000408981 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms