RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 CDKL5O76039 1030 aa19.58■□□□□ 0.72
CBX6-202ENST00000407418 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.72
CBX6-202ENST00000407418 DNAI2Q9GZS0 605 aa19.58■□□□□ 0.72
CBX6-202ENST00000407418 DZIP1Q86YF9 867 aaKnown RBP19.58■□□□□ 0.72
CBX6-202ENST00000407418 C1orf115Q9H7X2 142 aa19.58■□□□□ 0.72
CBX6-202ENST00000407418 WASLO00401 505 aaPredicted RBP19.58■□□□□ 0.72
CBX6-202ENST00000407418 AIDAQ96BJ3 306 aa19.58■□□□□ 0.72
CBX6-202ENST00000407418 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.72
CBX6-202ENST00000407418 MATR3P43243 847 aaKnown RBP eCLIP19.57■□□□□ 0.72
CBX6-202ENST00000407418 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
CBX6-202ENST00000407418 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
CBX6-202ENST00000407418 JMYQ8N9B5 988 aa19.57■□□□□ 0.72
CBX6-202ENST00000407418 SDF4Q9BRK5 362 aa19.57■□□□□ 0.72
CBX6-202ENST00000407418 MCM2P49736 904 aa19.57■□□□□ 0.72
CBX6-202ENST00000407418 HOMER1Q86YM7 354 aa19.57■□□□□ 0.72
CBX6-202ENST00000407418 CCDC85AQ96PX6 553 aaPredicted RBP19.57■□□□□ 0.72
CBX6-202ENST00000407418 CHMP5Q9NZZ3 219 aa19.57■□□□□ 0.72
CBX6-202ENST00000407418 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
CBX6-202ENST00000407418 ABCF2Q9UG63 623 aa19.56■□□□□ 0.72
CBX6-202ENST00000407418 SLC5A1P13866 664 aa19.56■□□□□ 0.72
CBX6-202ENST00000407418 TRMT112Q9UI30 125 aaKnown RBP19.56■□□□□ 0.72
CBX6-202ENST00000407418 ZNF592Q92610 1267 aa19.56■□□□□ 0.72
CBX6-202ENST00000407418 IDH1O75874 414 aaKnown RBP19.55■□□□□ 0.72
CBX6-202ENST00000407418 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 CYP46A1Q9Y6A2 500 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 PATL2C9JE40 543 aaKnown RBP19.55■□□□□ 0.72
CBX6-202ENST00000407418 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 FILIP1LQ4L180 1135 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 PDCL3Q9H2J4 239 aa19.55■□□□□ 0.72
CBX6-202ENST00000407418 ZNF622Q969S3 477 aaKnown RBP eCLIP19.54■□□□□ 0.72
CBX6-202ENST00000407418 MYD88Q99836 296 aa19.54■□□□□ 0.72
CBX6-202ENST00000407418 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
CBX6-202ENST00000407418 USHBP1Q8N6Y0 703 aa19.54■□□□□ 0.72
CBX6-202ENST00000407418 POLD1P28340 1107 aa19.54■□□□□ 0.72
CBX6-202ENST00000407418 CDR1P51861 262 aa19.54■□□□□ 0.72
CBX6-202ENST00000407418 STK38Q15208 465 aa19.53■□□□□ 0.72
CBX6-202ENST00000407418 STIM1Q13586 685 aa19.53■□□□□ 0.72
CBX6-202ENST00000407418 DESP17661 470 aa19.53■□□□□ 0.72
CBX6-202ENST00000407418 PPP4R3AQ6IN85 833 aa19.53■□□□□ 0.72
CBX6-202ENST00000407418 MYO6Q9UM54 1294 aa19.53■□□□□ 0.72
CBX6-202ENST00000407418 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
CBX6-202ENST00000407418 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
CBX6-202ENST00000407418 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.72
CBX6-202ENST00000407418 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
CBX6-202ENST00000407418 ANKRD18BA2A2Z9 1011 aa19.52■□□□□ 0.72
CBX6-202ENST00000407418 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
CBX6-202ENST00000407418 WASF1Q92558 559 aa19.52■□□□□ 0.72
CBX6-202ENST00000407418 SCLT1Q96NL6 688 aa19.52■□□□□ 0.72
CBX6-202ENST00000407418 MYO1BO43795 1136 aa19.52■□□□□ 0.71
CBX6-202ENST00000407418 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.71
CBX6-202ENST00000407418 PPP1R42Q7Z4L9 355 aa19.52■□□□□ 0.71
CBX6-202ENST00000407418 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.71
CBX6-202ENST00000407418 C6orf229H3BNL8 230 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
CBX6-202ENST00000407418 SMARCE1Q969G3 411 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 EHMT1Q9H9B1 1298 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 PDILTQ8N807 584 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 MKNK2Q9HBH9 465 aa19.51■□□□□ 0.71
CBX6-202ENST00000407418 IBSPP21815 317 aaPredicted RBP19.5■□□□□ 0.71
CBX6-202ENST00000407418 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
CBX6-202ENST00000407418 IMMTQ16891 758 aaKnown RBP19.5■□□□□ 0.71
CBX6-202ENST00000407418 TEX35Q5T0J7 233 aa19.5■□□□□ 0.71
CBX6-202ENST00000407418 FAM13BQ9NYF5 915 aa19.5■□□□□ 0.71
CBX6-202ENST00000407418 TMEM87AQ8NBN3 555 aa19.5■□□□□ 0.71
CBX6-202ENST00000407418 MAP4K4O95819 1239 aaPredicted RBP19.49■□□□□ 0.71
CBX6-202ENST00000407418 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
CBX6-202ENST00000407418 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 HYPKQ9NX55 129 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 DUSP27Q5VZP5 1158 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 LETM1O95202 739 aaPredicted RBP19.49■□□□□ 0.71
CBX6-202ENST00000407418 RUFY1Q96T51 708 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 NME9Q86XW9 330 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 CUL5Q93034 780 aa19.49■□□□□ 0.71
CBX6-202ENST00000407418 AEBP1Q8IUX7 1158 aa19.48■□□□□ 0.71
CBX6-202ENST00000407418 DACH1Q9UI36 760 aa19.48■□□□□ 0.71
CBX6-202ENST00000407418 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
CBX6-202ENST00000407418 CALRP27797 417 aaKnown RBP19.48■□□□□ 0.71
CBX6-202ENST00000407418 KRT32Q14532 448 aa19.48■□□□□ 0.71
CBX6-202ENST00000407418 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 IDI1Q13907 227 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 SMARCC1Q92922 1105 aaPredicted RBP19.47■□□□□ 0.71
CBX6-202ENST00000407418 MAP3K12Q12852 859 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 NCOA1Q15788 1441 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
CBX6-202ENST00000407418 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 NEK4P51957 841 aa19.47■□□□□ 0.71
CBX6-202ENST00000407418 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.47■□□□□ 0.71
CBX6-202ENST00000407418 MPHOSPH6Q99547 160 aaKnown RBP19.47■□□□□ 0.71
CBX6-202ENST00000407418 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
CBX6-202ENST00000407418 NAIPQ13075 1403 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 RABEP1Q15276 862 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
CBX6-202ENST00000407418 MCM10Q7L590 875 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms