RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
PSME4-202ENST00000404125 F8W031 263 aaPredicted RBP16.37■□□□□ 0.21
PSME4-202ENST00000404125 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■□□□□ 11.3
PSME4-202ENST00000404125 SDF4Q9BRK5 362 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 TTLL12Q14166 644 aaPredicted RBP16.36■□□□□ 0.21
PSME4-202ENST00000404125 GSE1Q14687 1217 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 NFE2L2Q16236 605 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 ACEP12821 1306 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
PSME4-202ENST00000404125 ATP6V1DQ9Y5K8 247 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
PSME4-202ENST00000404125 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 STARD3NLO95772 234 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
PSME4-202ENST00000404125 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
PSME4-202ENST00000404125 DHX8Q14562 1220 aaKnown RBP16.35■□□□□ 0.21
PSME4-202ENST00000404125 CHD1LQ86WJ1 897 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 JAKMIP1Q96N16 626 aaKnown RBP16.35■□□□□ 0.21
PSME4-202ENST00000404125 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
PSME4-202ENST00000404125 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
PSME4-202ENST00000404125 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
PSME4-202ENST00000404125 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
PSME4-202ENST00000404125 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
PSME4-202ENST00000404125 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
PSME4-202ENST00000404125 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
PSME4-202ENST00000404125 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.21
PSME4-202ENST00000404125 KRT18P05783 430 aaKnown RBP16.33■□□□□ 0.2
PSME4-202ENST00000404125 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
PSME4-202ENST00000404125 IGHMBP2P38935 993 aaKnown RBP16.33■□□□□ 0.2
PSME4-202ENST00000404125 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
PSME4-202ENST00000404125 SMC2O95347 1197 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
PSME4-202ENST00000404125 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 KRI1Q8N9T8 703 aaKnown RBP16.32■□□□□ 0.2
PSME4-202ENST00000404125 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 EXOC5O00471 708 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
PSME4-202ENST00000404125 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
PSME4-202ENST00000404125 TPM1P09493 284 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
PSME4-202ENST00000404125 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
PSME4-202ENST00000404125 CUL7Q14999 1698 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 PSMA5P28066 241 aa16.31■□□□□ 0.2
PSME4-202ENST00000404125 MAP3K1Q13233 1512 aa16.3■□□□□ 0.2
PSME4-202ENST00000404125 DHX37Q8IY37 1157 aaKnown RBP16.3■□□□□ 0.2
PSME4-202ENST00000404125 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.21e-7■■□□□ 14.5
PSME4-202ENST00000404125 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
PSME4-202ENST00000404125 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.27e-24■■■■□ 21.7
PSME4-202ENST00000404125 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
PSME4-202ENST00000404125 HAND2P61296 217 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 CAMK4Q16566 473 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 VAT1LQ9HCJ6 419 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
PSME4-202ENST00000404125 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
PSME4-202ENST00000404125 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
PSME4-202ENST00000404125 POLR3DP05423 398 aaPredicted RBP16.28■□□□□ 0.2
PSME4-202ENST00000404125 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
PSME4-202ENST00000404125 A0A087WZG4 1122 aa16.28■□□□□ 0.2
PSME4-202ENST00000404125 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
PSME4-202ENST00000404125 GOLGA6L1Q8N7Z2 621 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 FCHSD2O94868 740 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 ME1P48163 572 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
PSME4-202ENST00000404125 AK7Q96M32 723 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.25e-7■■■■■ 71.2
PSME4-202ENST00000404125 KCNH5Q8NCM2 988 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
PSME4-202ENST00000404125 XBP1P17861 261 aa16.27■□□□□ 0.19
PSME4-202ENST00000404125 CYP46A1Q9Y6A2 500 aa16.27■□□□□ 0.19
PSME4-202ENST00000404125 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
PSME4-202ENST00000404125 RANBP6O60518 1105 aaKnown RBP16.26■□□□□ 0.19
PSME4-202ENST00000404125 LIG1P18858 919 aa16.26■□□□□ 0.19
PSME4-202ENST00000404125 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
PSME4-202ENST00000404125 SLFN5Q08AF3 891 aa16.26■□□□□ 0.19
PSME4-202ENST00000404125 PRPF40BQ6NWY9 871 aaKnown RBP16.26■□□□□ 0.19
PSME4-202ENST00000404125 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
PSME4-202ENST00000404125 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 RFC4P35249 363 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 RBM26Q5T8P6 1007 aaKnown RBP16.25■□□□□ 0.19
PSME4-202ENST00000404125 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 STK38Q15208 465 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 DTNBO60941 627 aa16.25■□□□□ 0.19
PSME4-202ENST00000404125 DZIP1Q86YF9 867 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms