RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
SDF4-203ENST00000403997 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
SDF4-203ENST00000403997 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
SDF4-203ENST00000403997 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
SDF4-203ENST00000403997 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
SDF4-203ENST00000403997 RGPD3A6NKT7 1758 aaPredicted RBP18.24■□□□□ 0.51
SDF4-203ENST00000403997 RGPD4Q7Z3J3 1758 aa18.24■□□□□ 0.51
SDF4-203ENST00000403997 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 EYA1Q99502 592 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
SDF4-203ENST00000403997 LRP5O75197 1615 aa18.23■□□□□ 0.51
SDF4-203ENST00000403997 NSD2O96028 1365 aa18.21■□□□□ 0.51
SDF4-203ENST00000403997 SPON1Q9HCB6 807 aa18.21■□□□□ 0.51
SDF4-203ENST00000403997 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SDF4-203ENST00000403997 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
SDF4-203ENST00000403997 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
SDF4-203ENST00000403997 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
SDF4-203ENST00000403997 BTAF1O14981 1849 aa18.19■□□□□ 0.5
SDF4-203ENST00000403997 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
SDF4-203ENST00000403997 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
SDF4-203ENST00000403997 SPG7Q9UQ90 795 aa18.18■□□□□ 0.5
SDF4-203ENST00000403997 CYP27B1O15528 508 aa18.17■□□□□ 0.5
SDF4-203ENST00000403997 SLC27A3Q5K4L6 730 aa18.17■□□□□ 0.5
SDF4-203ENST00000403997 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
SDF4-203ENST00000403997 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
SDF4-203ENST00000403997 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
SDF4-203ENST00000403997 KCNQ4P56696 695 aa18.15■□□□□ 0.5
SDF4-203ENST00000403997 PPP1R1BQ9UD71 204 aaPredicted RBP18.15■□□□□ 0.5
SDF4-203ENST00000403997 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
SDF4-203ENST00000403997 ZBTB7AO95365 584 aa18.14■□□□□ 0.49
SDF4-203ENST00000403997 YY1P25490 414 aa18.14■□□□□ 0.49
SDF4-203ENST00000403997 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
SDF4-203ENST00000403997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
SDF4-203ENST00000403997 DOT1LQ8TEK3 1739 aa18.13■□□□□ 0.49
SDF4-203ENST00000403997 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
SDF4-203ENST00000403997 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
SDF4-203ENST00000403997 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
SDF4-203ENST00000403997 ZNF827Q17R98 1081 aa18.12■□□□□ 0.49
SDF4-203ENST00000403997 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
SDF4-203ENST00000403997 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
SDF4-203ENST00000403997 CCNL1Q9UK58 526 aaPredicted RBP18.11■□□□□ 0.49
SDF4-203ENST00000403997 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
SDF4-203ENST00000403997 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
SDF4-203ENST00000403997 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
SDF4-203ENST00000403997 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
SDF4-203ENST00000403997 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
SDF4-203ENST00000403997 PHKG2P15735 406 aa18.08■□□□□ 0.48
SDF4-203ENST00000403997 MTHFSP49914 203 aa18.08■□□□□ 0.48
SDF4-203ENST00000403997 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
SDF4-203ENST00000403997 PIGBQ92521 554 aa18.08■□□□□ 0.48
SDF4-203ENST00000403997 MTFR1LQ9H019 292 aa18.08■□□□□ 0.48
SDF4-203ENST00000403997 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
SDF4-203ENST00000403997 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
SDF4-203ENST00000403997 IL13P35225 146 aa18.07■□□□□ 0.48
SDF4-203ENST00000403997 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
SDF4-203ENST00000403997 PAPPAQ13219 1627 aa18.06■□□□□ 0.48
SDF4-203ENST00000403997 PTGER2P43116 358 aa18.06■□□□□ 0.48
SDF4-203ENST00000403997 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
SDF4-203ENST00000403997 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
SDF4-203ENST00000403997 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
SDF4-203ENST00000403997 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
SDF4-203ENST00000403997 TMOD3Q9NYL9 352 aa18.05■□□□□ 0.48
SDF4-203ENST00000403997 ZNF530Q6P9A1 599 aaPredicted RBP18.04■□□□□ 0.48
SDF4-203ENST00000403997 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
SDF4-203ENST00000403997 HSP90AB1P08238 724 aaKnown RBP18.03■□□□□ 0.48
SDF4-203ENST00000403997 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
SDF4-203ENST00000403997 LY75O60449 1722 aa18.03■□□□□ 0.48
SDF4-203ENST00000403997 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
SDF4-203ENST00000403997 MSH5O43196 834 aa18.02■□□□□ 0.48
SDF4-203ENST00000403997 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
SDF4-203ENST00000403997 ASAP1Q9ULH1 1129 aa18.02■□□□□ 0.48
SDF4-203ENST00000403997 C1orf141Q5JVX7 400 aa18.01■□□□□ 0.47
SDF4-203ENST00000403997 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
SDF4-203ENST00000403997 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
SDF4-203ENST00000403997 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
SDF4-203ENST00000403997 ITGB4P16144 1822 aa18■□□□□ 0.47
SDF4-203ENST00000403997 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
SDF4-203ENST00000403997 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
SDF4-203ENST00000403997 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
SDF4-203ENST00000403997 LOC102724428A0A0B4J2F2 783 aa17.99■□□□□ 0.47
SDF4-203ENST00000403997 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
SDF4-203ENST00000403997 SIK1P57059 783 aa17.99■□□□□ 0.47
SDF4-203ENST00000403997 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
SDF4-203ENST00000403997 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SDF4-203ENST00000403997 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
SDF4-203ENST00000403997 HMOX1P09601 288 aa17.98■□□□□ 0.47
SDF4-203ENST00000403997 FHDC1Q9C0D6 1143 aaPredicted RBP17.98■□□□□ 0.47
SDF4-203ENST00000403997 KDRP35968 1356 aa17.97■□□□□ 0.47
SDF4-203ENST00000403997 POLD1P28340 1107 aa17.97■□□□□ 0.47
SDF4-203ENST00000403997 CABP4P57796 275 aa17.97■□□□□ 0.47
SDF4-203ENST00000403997 AK7Q96M32 723 aa17.97■□□□□ 0.47
SDF4-203ENST00000403997 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
SDF4-203ENST00000403997 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
SDF4-203ENST00000403997 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
SDF4-203ENST00000403997 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
SDF4-203ENST00000403997 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
SDF4-203ENST00000403997 QSER1Q2KHR3 1735 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms