RNA–Protein interactions for RNA: ENST00000403642.5

CHEK2-207, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,359 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-207ENST00000403642 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
CHEK2-207ENST00000403642 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
CHEK2-207ENST00000403642 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
CHEK2-207ENST00000403642 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
CHEK2-207ENST00000403642 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
CHEK2-207ENST00000403642 RAPGEF4Q8WZA2 1011 aa13.87□□□□□ -0.19
CHEK2-207ENST00000403642 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
CHEK2-207ENST00000403642 DOT1LQ8TEK3 1739 aa13.87□□□□□ -0.19
CHEK2-207ENST00000403642 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
CHEK2-207ENST00000403642 KCNQ2O43526 872 aa13.86□□□□□ -0.19
CHEK2-207ENST00000403642 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
CHEK2-207ENST00000403642 SRCAPQ6ZRS2 3230 aa13.86□□□□□ -0.19
CHEK2-207ENST00000403642 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
CHEK2-207ENST00000403642 PSDA5PKW4 1024 aaPredicted RBP13.85□□□□□ -0.19
CHEK2-207ENST00000403642 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
CHEK2-207ENST00000403642 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
CHEK2-207ENST00000403642 PLSCR1O15162 318 aa13.84□□□□□ -0.19
CHEK2-207ENST00000403642 EYA1Q99502 592 aa13.84□□□□□ -0.19
CHEK2-207ENST00000403642 BTAF1O14981 1849 aa13.84□□□□□ -0.19
CHEK2-207ENST00000403642 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.19
CHEK2-207ENST00000403642 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
CHEK2-207ENST00000403642 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
CHEK2-207ENST00000403642 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
CHEK2-207ENST00000403642 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
CHEK2-207ENST00000403642 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
CHEK2-207ENST00000403642 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
CHEK2-207ENST00000403642 PROM2Q8N271 834 aa13.81□□□□□ -0.2
CHEK2-207ENST00000403642 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
CHEK2-207ENST00000403642 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
CHEK2-207ENST00000403642 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
CHEK2-207ENST00000403642 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
CHEK2-207ENST00000403642 LRP5O75197 1615 aa13.79□□□□□ -0.2
CHEK2-207ENST00000403642 CYP27B1O15528 508 aa13.79□□□□□ -0.2
CHEK2-207ENST00000403642 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
CHEK2-207ENST00000403642 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
CHEK2-207ENST00000403642 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
CHEK2-207ENST00000403642 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
CHEK2-207ENST00000403642 MTHFSP49914 203 aa13.78□□□□□ -0.2
CHEK2-207ENST00000403642 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.2
CHEK2-207ENST00000403642 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
CHEK2-207ENST00000403642 IL13P35225 146 aa13.76□□□□□ -0.21
CHEK2-207ENST00000403642 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
CHEK2-207ENST00000403642 LY75O60449 1722 aa13.76□□□□□ -0.21
CHEK2-207ENST00000403642 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-207ENST00000403642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■□□□ 13.1
CHEK2-207ENST00000403642 KDRP35968 1356 aa13.75□□□□□ -0.21
CHEK2-207ENST00000403642 PHKG2P15735 406 aa13.74□□□□□ -0.21
CHEK2-207ENST00000403642 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
CHEK2-207ENST00000403642 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
CHEK2-207ENST00000403642 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
CHEK2-207ENST00000403642 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
CHEK2-207ENST00000403642 ITGB4P16144 1822 aa13.73□□□□□ -0.21
CHEK2-207ENST00000403642 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
CHEK2-207ENST00000403642 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
CHEK2-207ENST00000403642 SLC15A2Q16348 729 aa13.71□□□□□ -0.21
CHEK2-207ENST00000403642 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
CHEK2-207ENST00000403642 MPRIPQ6WCQ1 1025 aa13.71□□□□□ -0.21
CHEK2-207ENST00000403642 STK32BQ9NY57 414 aa13.71□□□□□ -0.21
CHEK2-207ENST00000403642 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
CHEK2-207ENST00000403642 KCNQ4P56696 695 aa13.71□□□□□ -0.22
CHEK2-207ENST00000403642 ZNF827Q17R98 1081 aa13.71□□□□□ -0.22
CHEK2-207ENST00000403642 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.22
CHEK2-207ENST00000403642 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
CHEK2-207ENST00000403642 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-207ENST00000403642 HMOX1P09601 288 aa13.7□□□□□ -0.22
CHEK2-207ENST00000403642 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
CHEK2-207ENST00000403642 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-207ENST00000403642 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-207ENST00000403642 PIGBQ92521 554 aa13.69□□□□□ -0.22
CHEK2-207ENST00000403642 CCNL1Q9UK58 526 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-207ENST00000403642 C5P01031 1676 aa13.69□□□□□ -0.22
CHEK2-207ENST00000403642 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
CHEK2-207ENST00000403642 TUBGCP6Q96RT7 1819 aa13.67□□□□□ -0.22
CHEK2-207ENST00000403642 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
CHEK2-207ENST00000403642 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
CHEK2-207ENST00000403642 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CHEK2-207ENST00000403642 DCAF5Q96JK2 942 aa13.67□□□□□ -0.22
CHEK2-207ENST00000403642 QSER1Q2KHR3 1735 aa13.67□□□□□ -0.22
CHEK2-207ENST00000403642 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
CHEK2-207ENST00000403642 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
CHEK2-207ENST00000403642 ZBTB7AO95365 584 aa13.65□□□□□ -0.22
CHEK2-207ENST00000403642 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
CHEK2-207ENST00000403642 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
CHEK2-207ENST00000403642 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
CHEK2-207ENST00000403642 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
CHEK2-207ENST00000403642 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
CHEK2-207ENST00000403642 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
CHEK2-207ENST00000403642 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
CHEK2-207ENST00000403642 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
CHEK2-207ENST00000403642 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
CHEK2-207ENST00000403642 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
CHEK2-207ENST00000403642 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
CHEK2-207ENST00000403642 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
CHEK2-207ENST00000403642 CABP4P57796 275 aa13.62□□□□□ -0.23
CHEK2-207ENST00000403642 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
CHEK2-207ENST00000403642 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
CHEK2-207ENST00000403642 ATG3Q9NT62 314 aa13.62□□□□□ -0.23
CHEK2-207ENST00000403642 MRC1P22897 1456 aa13.62□□□□□ -0.23
CHEK2-207ENST00000403642 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
CHEK2-207ENST00000403642 LOC102724428A0A0B4J2F2 783 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms