RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 HOXC9P31274 260 aa22.55■■□□□ 1.2
CHTOP-205ENST00000403433 LTN1O94822 1766 aa22.55■■□□□ 1.2
CHTOP-205ENST00000403433 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
CHTOP-205ENST00000403433 NUCB1Q02818 461 aa22.54■■□□□ 1.2
CHTOP-205ENST00000403433 C14orf37Q86TY3 774 aa22.54■■□□□ 1.2
CHTOP-205ENST00000403433 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
CHTOP-205ENST00000403433 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-205ENST00000403433 FOXO3O43524 673 aa22.53■■□□□ 1.2
CHTOP-205ENST00000403433 SLC4A3P48751 1232 aa22.53■■□□□ 1.2
CHTOP-205ENST00000403433 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
CHTOP-205ENST00000403433 NWD1Q149M9 1564 aa22.52■■□□□ 1.2
CHTOP-205ENST00000403433 C1orf115Q9H7X2 142 aa22.52■■□□□ 1.2
CHTOP-205ENST00000403433 GCC1Q96CN9 775 aa22.51■■□□□ 1.19
CHTOP-205ENST00000403433 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
CHTOP-205ENST00000403433 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
CHTOP-205ENST00000403433 TSPYL4Q9UJ04 414 aa22.5■■□□□ 1.19
CHTOP-205ENST00000403433 HTATSF1O43719 755 aaKnown RBP22.49■■□□□ 1.19
CHTOP-205ENST00000403433 PTPRCP08575 1304 aa22.49■■□□□ 1.19
CHTOP-205ENST00000403433 RGS12O14924 1447 aa22.48■■□□□ 1.19
CHTOP-205ENST00000403433 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
CHTOP-205ENST00000403433 LNPKQ9C0E8 428 aa22.48■■□□□ 1.19
CHTOP-205ENST00000403433 NFAT5O94916 1531 aa22.48■■□□□ 1.19
CHTOP-205ENST00000403433 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
CHTOP-205ENST00000403433 TBC1D32Q96NH3 1257 aa22.47■■□□□ 1.19
CHTOP-205ENST00000403433 LTV1Q96GA3 475 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-205ENST00000403433 PSME1Q06323 249 aa22.46■■□□□ 1.19
CHTOP-205ENST00000403433 BECN1Q14457 450 aa22.46■■□□□ 1.19
CHTOP-205ENST00000403433 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
CHTOP-205ENST00000403433 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.18
CHTOP-205ENST00000403433 USP35Q9P2H5 1018 aa22.45■■□□□ 1.18
CHTOP-205ENST00000403433 MAP3K5Q99683 1374 aa22.45■■□□□ 1.18
CHTOP-205ENST00000403433 ANKRD45Q5TZF3 282 aa22.44■■□□□ 1.18
CHTOP-205ENST00000403433 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
CHTOP-205ENST00000403433 PHRF1Q9P1Y6 1649 aaKnown RBP22.43■■□□□ 1.18
CHTOP-205ENST00000403433 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
CHTOP-205ENST00000403433 IP6K1Q92551 441 aa22.42■■□□□ 1.18
CHTOP-205ENST00000403433 MSH6P52701 1360 aa22.42■■□□□ 1.18
CHTOP-205ENST00000403433 FAM208AQ9UK61 1670 aaKnown RBP22.42■■□□□ 1.18
CHTOP-205ENST00000403433 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
CHTOP-205ENST00000403433 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.18
CHTOP-205ENST00000403433 ATP10DQ9P241 1426 aa22.38■■□□□ 1.17
CHTOP-205ENST00000403433 DEKP35659 375 aaKnown RBP22.38■■□□□ 1.17
CHTOP-205ENST00000403433 BMP2KLQ5H9B9 411 aa22.38■■□□□ 1.17
CHTOP-205ENST00000403433 USHBP1Q8N6Y0 703 aa22.38■■□□□ 1.17
CHTOP-205ENST00000403433 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
CHTOP-205ENST00000403433 C22orf23Q9BZE7 217 aa22.37■■□□□ 1.17
CHTOP-205ENST00000403433 BABAM1Q9NWV8 329 aa22.37■■□□□ 1.17
CHTOP-205ENST00000403433 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
CHTOP-205ENST00000403433 ANKRD44Q8N8A2 993 aa22.36■■□□□ 1.17
CHTOP-205ENST00000403433 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
CHTOP-205ENST00000403433 SLIT3O75094 1523 aa22.36■■□□□ 1.17
CHTOP-205ENST00000403433 ZBTB7CA1YPR0 619 aa22.35■■□□□ 1.17
CHTOP-205ENST00000403433 RPAP2Q8IXW5 612 aaPredicted RBP22.35■■□□□ 1.17
CHTOP-205ENST00000403433 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
CHTOP-205ENST00000403433 CACNA1FO60840 1977 aa22.35■■□□□ 1.17
CHTOP-205ENST00000403433 IL17REQ8NFR9 667 aa22.35■■□□□ 1.17
CHTOP-205ENST00000403433 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
CHTOP-205ENST00000403433 TRPM3Q9HCF6 1732 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-205ENST00000403433 CCT4P50991 539 aaKnown RBP22.34■■□□□ 1.17
CHTOP-205ENST00000403433 TAF7Q15545 349 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-205ENST00000403433 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
CHTOP-205ENST00000403433 DCTPP1Q9H773 170 aa22.34■■□□□ 1.17
CHTOP-205ENST00000403433 CEP85Q6P2H3 762 aa22.33■■□□□ 1.16
CHTOP-205ENST00000403433 G2E3Q7L622 706 aa22.33■■□□□ 1.16
CHTOP-205ENST00000403433 MEIS3Q99687 375 aa22.33■■□□□ 1.16
CHTOP-205ENST00000403433 NFKBIBQ15653 356 aa22.32■■□□□ 1.16
CHTOP-205ENST00000403433 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
CHTOP-205ENST00000403433 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
CHTOP-205ENST00000403433 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
CHTOP-205ENST00000403433 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
CHTOP-205ENST00000403433 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
CHTOP-205ENST00000403433 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
CHTOP-205ENST00000403433 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
CHTOP-205ENST00000403433 N4BP2Q86UW6 1770 aaPredicted RBP22.3■■□□□ 1.16
CHTOP-205ENST00000403433 F6X3S4 739 aa22.29■■□□□ 1.16
CHTOP-205ENST00000403433 CEMIPQ8WUJ3 1361 aa22.29■■□□□ 1.16
CHTOP-205ENST00000403433 GCP02774 474 aa22.29■■□□□ 1.16
CHTOP-205ENST00000403433 FLIIQ13045 1269 aa22.29■■□□□ 1.16
CHTOP-205ENST00000403433 TBC1D2Q9BYX2 928 aa22.29■■□□□ 1.16
CHTOP-205ENST00000403433 LMOD2Q6P5Q4 547 aa22.28■■□□□ 1.16
CHTOP-205ENST00000403433 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
CHTOP-205ENST00000403433 KDM3BQ7LBC6 1761 aa22.28■■□□□ 1.16
CHTOP-205ENST00000403433 HMMRO75330 724 aa22.27■■□□□ 1.16
CHTOP-205ENST00000403433 FKBP5Q13451 457 aaPredicted RBP22.27■■□□□ 1.16
CHTOP-205ENST00000403433 ARHGEF25Q86VW2 580 aa22.27■■□□□ 1.16
CHTOP-205ENST00000403433 NECTIN2Q92692 538 aa22.26■■□□□ 1.15
CHTOP-205ENST00000403433 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 LRRC59Q96AG4 307 aaKnown RBP22.25■■□□□ 1.15
CHTOP-205ENST00000403433 C19orf44Q9H6X5 657 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 CAMTA1Q9Y6Y1 1673 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 NCAPD2Q15021 1401 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 PLEKHO1Q53GL0 409 aaPredicted RBP22.25■■□□□ 1.15
CHTOP-205ENST00000403433 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
CHTOP-205ENST00000403433 PLEKHG5O94827 1062 aa22.24■■□□□ 1.15
CHTOP-205ENST00000403433 RBM25P49756 843 aaKnown RBP22.24■■□□□ 1.15
CHTOP-205ENST00000403433 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
CHTOP-205ENST00000403433 ZNF530Q6P9A1 599 aaPredicted RBP22.23■■□□□ 1.15
CHTOP-205ENST00000403433 SLKQ9H2G2 1235 aaPredicted RBP22.23■■□□□ 1.15
CHTOP-205ENST00000403433 ALS2Q96Q42 1657 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms