RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
HDAC11-202ENST00000402259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.32
HDAC11-202ENST00000402259 U2SURPO15042 1029 aaKnown RBP23.29■■□□□ 1.32
HDAC11-202ENST00000402259 ZCRB1Q8TBF4 217 aaKnown RBP23.29■■□□□ 1.32
HDAC11-202ENST00000402259 BCL9O00512 1426 aa23.28■■□□□ 1.32
HDAC11-202ENST00000402259 AEBP1Q8IUX7 1158 aa23.28■■□□□ 1.32
HDAC11-202ENST00000402259 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
HDAC11-202ENST00000402259 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
HDAC11-202ENST00000402259 PCDH11XQ9BZA7 1347 aa23.25■■□□□ 1.31
HDAC11-202ENST00000402259 PCDH11YQ9BZA8 1340 aa23.25■■□□□ 1.31
HDAC11-202ENST00000402259 HMOX1P09601 288 aa23.24■■□□□ 1.31
HDAC11-202ENST00000402259 U2AF1L5P0DN76 240 aaPredicted RBP23.24■■□□□ 1.31
HDAC11-202ENST00000402259 U2AF1Q01081 240 aaKnown RBP eCLIP23.24■■□□□ 1.31
HDAC11-202ENST00000402259 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
HDAC11-202ENST00000402259 FAM196AQ6ZSG2 479 aa23.24■■□□□ 1.31
HDAC11-202ENST00000402259 FCHSD2O94868 740 aa23.23■■□□□ 1.31
HDAC11-202ENST00000402259 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
HDAC11-202ENST00000402259 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
HDAC11-202ENST00000402259 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
HDAC11-202ENST00000402259 SBF2Q86WG5 1849 aa23.2■■□□□ 1.3
HDAC11-202ENST00000402259 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
HDAC11-202ENST00000402259 CYP27B1O15528 508 aa23.18■■□□□ 1.3
HDAC11-202ENST00000402259 FAM182BQ5T319 152 aa23.18■■□□□ 1.3
HDAC11-202ENST00000402259 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
HDAC11-202ENST00000402259 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
HDAC11-202ENST00000402259 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
HDAC11-202ENST00000402259 NKX1-1Q15270 411 aaPredicted RBP23.17■■□□□ 1.3
HDAC11-202ENST00000402259 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
HDAC11-202ENST00000402259 PHKG2P15735 406 aa23.16■■□□□ 1.3
HDAC11-202ENST00000402259 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
HDAC11-202ENST00000402259 CCDC125Q86Z20 511 aa23.15■■□□□ 1.3
HDAC11-202ENST00000402259 CCDC184Q52MB2 194 aa23.14■■□□□ 1.29
HDAC11-202ENST00000402259 ZNF530Q6P9A1 599 aaPredicted RBP23.14■■□□□ 1.29
HDAC11-202ENST00000402259 MRS2Q9HD23 443 aa23.14■■□□□ 1.29
HDAC11-202ENST00000402259 DOT1LQ8TEK3 1739 aa23.13■■□□□ 1.29
HDAC11-202ENST00000402259 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
HDAC11-202ENST00000402259 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
HDAC11-202ENST00000402259 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
HDAC11-202ENST00000402259 SOCS7O14512 581 aa23.12■■□□□ 1.29
HDAC11-202ENST00000402259 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
HDAC11-202ENST00000402259 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
HDAC11-202ENST00000402259 UPF1Q92900 1129 aaKnown RBP eCLIP23.12■■□□□ 1.296e-7■■■■■ 50.3
HDAC11-202ENST00000402259 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
HDAC11-202ENST00000402259 NEFMP07197 916 aa23.11■■□□□ 1.29
HDAC11-202ENST00000402259 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
HDAC11-202ENST00000402259 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
HDAC11-202ENST00000402259 EP400Q96L91 3159 aa23.11■■□□□ 1.29
HDAC11-202ENST00000402259 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
HDAC11-202ENST00000402259 CCER2I3L3R5 266 aa23.1■■□□□ 1.29
HDAC11-202ENST00000402259 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
HDAC11-202ENST00000402259 KAT6BQ8WYB5 2073 aa23.1■■□□□ 1.29
HDAC11-202ENST00000402259 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
HDAC11-202ENST00000402259 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
HDAC11-202ENST00000402259 BCL11BQ9C0K0 894 aaPredicted RBP23.09■■□□□ 1.29
HDAC11-202ENST00000402259 ADAMTS8Q9UP79 889 aa23.09■■□□□ 1.29
HDAC11-202ENST00000402259 TRIM37O94972 964 aa23.08■■□□□ 1.29
HDAC11-202ENST00000402259 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.29
HDAC11-202ENST00000402259 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.28
HDAC11-202ENST00000402259 ITGB4P16144 1822 aa23.07■■□□□ 1.28
HDAC11-202ENST00000402259 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
HDAC11-202ENST00000402259 MAP3K5Q99683 1374 aa23.06■■□□□ 1.28
HDAC11-202ENST00000402259 SF3B2Q13435 895 aaKnown RBP23.06■■□□□ 1.28
HDAC11-202ENST00000402259 KDM6AO15550 1401 aaPredicted RBP23.06■■□□□ 1.28
HDAC11-202ENST00000402259 RGPD3A6NKT7 1758 aaPredicted RBP23.05■■□□□ 1.28
HDAC11-202ENST00000402259 RGPD4Q7Z3J3 1758 aa23.05■■□□□ 1.28
HDAC11-202ENST00000402259 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
HDAC11-202ENST00000402259 ACSBG1Q96GR2 724 aa23.05■■□□□ 1.28
HDAC11-202ENST00000402259 BTAF1O14981 1849 aa23.05■■□□□ 1.28
HDAC11-202ENST00000402259 GNAT3A8MTJ3 354 aa23.04■■□□□ 1.28
HDAC11-202ENST00000402259 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
HDAC11-202ENST00000402259 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
HDAC11-202ENST00000402259 KCNQ2O43526 872 aa23.03■■□□□ 1.28
HDAC11-202ENST00000402259 HTATSF1O43719 755 aaKnown RBP23.03■■□□□ 1.28
HDAC11-202ENST00000402259 PRIM1P49642 420 aaKnown RBP23.03■■□□□ 1.28
HDAC11-202ENST00000402259 NFE2L2Q16236 605 aa23.02■■□□□ 1.28
HDAC11-202ENST00000402259 MRC1P22897 1456 aa23.02■■□□□ 1.28
HDAC11-202ENST00000402259 BAG6P46379 1132 aa23.01■■□□□ 1.27
HDAC11-202ENST00000402259 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
HDAC11-202ENST00000402259 RNMTO43148 476 aaKnown RBP23■■□□□ 1.27
HDAC11-202ENST00000402259 PTF1AQ7RTS3 328 aa23■■□□□ 1.27
HDAC11-202ENST00000402259 PLSCR1O15162 318 aa22.99■■□□□ 1.27
HDAC11-202ENST00000402259 APBA3O96018 575 aa22.99■■□□□ 1.27
HDAC11-202ENST00000402259 MIER1Q8N108 512 aa22.99■■□□□ 1.27
HDAC11-202ENST00000402259 SYTL4Q96C24 671 aaPredicted RBP22.99■■□□□ 1.27
HDAC11-202ENST00000402259 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
HDAC11-202ENST00000402259 CCDC146Q8IYE0 955 aa22.98■■□□□ 1.27
HDAC11-202ENST00000402259 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
HDAC11-202ENST00000402259 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
HDAC11-202ENST00000402259 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
HDAC11-202ENST00000402259 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
HDAC11-202ENST00000402259 CABP4P57796 275 aa22.96■■□□□ 1.27
HDAC11-202ENST00000402259 IL17REQ8NFR9 667 aa22.96■■□□□ 1.27
HDAC11-202ENST00000402259 PIGBQ92521 554 aa22.96■■□□□ 1.27
HDAC11-202ENST00000402259 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
HDAC11-202ENST00000402259 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
HDAC11-202ENST00000402259 LY75O60449 1722 aa22.94■■□□□ 1.26
HDAC11-202ENST00000402259 LMOD3Q0VAK6 560 aa22.94■■□□□ 1.26
HDAC11-202ENST00000402259 RREB1Q92766 1687 aa22.93■■□□□ 1.26
HDAC11-202ENST00000402259 RIPK4P57078 832 aa22.93■■□□□ 1.26
HDAC11-202ENST00000402259 DEFB132Q7Z7B7 95 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms