RNA–Protein interactions for RNA: ENST00000401000.8

RPRD2-203, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPRD2, Length 7,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-203ENST00000401000 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
RPRD2-203ENST00000401000 ZSCAN31Q96LW9 406 aaPredicted RBP11.72□□□□□ -0.53
RPRD2-203ENST00000401000 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.53
RPRD2-203ENST00000401000 ZSCAN25Q6NSZ9 544 aa11.71□□□□□ -0.53
RPRD2-203ENST00000401000 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.53
RPRD2-203ENST00000401000 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
RPRD2-203ENST00000401000 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPRD2-203ENST00000401000 TDO2P48775 406 aa11.71□□□□□ -0.54
RPRD2-203ENST00000401000 CCDC91Q7Z6B0 441 aa11.71□□□□□ -0.54
RPRD2-203ENST00000401000 POLR3GO15318 223 aaPredicted RBP11.71□□□□□ -0.54
RPRD2-203ENST00000401000 ARHGAP5Q13017 1502 aa11.71□□□□□ -0.54
RPRD2-203ENST00000401000 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
RPRD2-203ENST00000401000 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
RPRD2-203ENST00000401000 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
RPRD2-203ENST00000401000 SCAPERQ9BY12 1400 aa11.7□□□□□ -0.54
RPRD2-203ENST00000401000 NEBLO76041 1014 aa11.7□□□□□ -0.54
RPRD2-203ENST00000401000 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPRD2-203ENST00000401000 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 CABP4P57796 275 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 UBAC1Q9BSL1 405 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 ZNF76P36508 570 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 SULT6B1Q6IMI4 303 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 CCDC83Q8IWF9 413 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPRD2-203ENST00000401000 SPA17Q15506 151 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 KIF5CO60282 957 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 MAP9Q49MG5 647 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
RPRD2-203ENST00000401000 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 RNF187Q5TA31 235 aaPredicted RBP11.68□□□□□ -0.54
RPRD2-203ENST00000401000 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 URI1O94763 535 aaPredicted RBP11.68□□□□□ -0.54
RPRD2-203ENST00000401000 ESCO1Q5FWF5 840 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 CGNQ9P2M7 1197 aaKnown RBP11.68□□□□□ -0.54
RPRD2-203ENST00000401000 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 ZSCAN12O43309 604 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 USP5P45974 858 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
RPRD2-203ENST00000401000 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 DESP17661 470 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 KLHL10Q6JEL2 608 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 WASF1Q92558 559 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
RPRD2-203ENST00000401000 MPHOSPH8Q99549 860 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■■■□□ 15
RPRD2-203ENST00000401000 NF2P35240 595 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 KRT32Q14532 448 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 ANKRD50Q9ULJ7 1429 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
RPRD2-203ENST00000401000 DNA2P51530 1060 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 PRAM1Q96QH2 718 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
RPRD2-203ENST00000401000 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
RPRD2-203ENST00000401000 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 KIF21BO75037 1637 aa11.66□□□□□ -0.54
RPRD2-203ENST00000401000 KIF2AO00139 706 aaPredicted RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 MCM3P25205 808 aa11.66□□□□□ -0.54
RPRD2-203ENST00000401000 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
RPRD2-203ENST00000401000 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
RPRD2-203ENST00000401000 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
RPRD2-203ENST00000401000 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
RPRD2-203ENST00000401000 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 BTBD11A6QL63 1104 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 ANO10Q9NW15 660 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 TNNT1P13805 278 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 UBE4AQ14139 1066 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.54
RPRD2-203ENST00000401000 LUZP1Q86V48 1076 aa11.65□□□□□ -0.55
RPRD2-203ENST00000401000 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.55
RPRD2-203ENST00000401000 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 ANAPC15P60006 121 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 FKBP15Q5T1M5 1219 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 GUCY1B3Q02153 619 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 DDX54Q8TDD1 881 aaKnown RBP11.64□□□□□ -0.55
RPRD2-203ENST00000401000 C16orf45Q96MC5 204 aaPredicted RBP11.64□□□□□ -0.55
RPRD2-203ENST00000401000 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
RPRD2-203ENST00000401000 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
RPRD2-203ENST00000401000 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 CALCOCO1Q9P1Z2 691 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 NCOA2Q15596 1464 aa11.64□□□□□ -0.55
RPRD2-203ENST00000401000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms