RNA–Protein interactions for RNA: ENST00000400758.6

PRKAR1B-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

TSL 3

Gene PRKAR1B, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-202ENST00000400758 RGPD2P0DJD1 1756 aa34.43■■■■□ 3.1
PRKAR1B-202ENST00000400758 SBF2Q86WG5 1849 aa34.41■■■■□ 3.1
PRKAR1B-202ENST00000400758 CC2D1BQ5T0F9 858 aaKnown RBP34.4■■■■□ 3.1
PRKAR1B-202ENST00000400758 ZEB1P37275 1124 aaPredicted RBP34.39■■■■□ 3.1
PRKAR1B-202ENST00000400758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.39■■■■□ 3.1
PRKAR1B-202ENST00000400758 PCDH11XQ9BZA7 1347 aa34.38■■■■□ 3.09
PRKAR1B-202ENST00000400758 PCDH11YQ9BZA8 1340 aa34.38■■■■□ 3.09
PRKAR1B-202ENST00000400758 IGSF1Q8N6C5 1336 aa34.36■■■■□ 3.09
PRKAR1B-202ENST00000400758 PTF1AQ7RTS3 328 aa34.35■■■■□ 3.09
PRKAR1B-202ENST00000400758 RGPD3A6NKT7 1758 aaPredicted RBP34.35■■■■□ 3.09
PRKAR1B-202ENST00000400758 RGPD4Q7Z3J3 1758 aa34.35■■■■□ 3.09
PRKAR1B-202ENST00000400758 KCNQ2O43526 872 aa34.34■■■■□ 3.09
PRKAR1B-202ENST00000400758 SPG7Q9UQ90 795 aa34.34■■■■□ 3.09
PRKAR1B-202ENST00000400758 MTHFSP49914 203 aa34.33■■■■□ 3.09
PRKAR1B-202ENST00000400758 ACSBG1Q96GR2 724 aa34.33■■■■□ 3.09
PRKAR1B-202ENST00000400758 NHSQ6T4R5 1651 aa34.33■■■■□ 3.09
PRKAR1B-202ENST00000400758 NBPF14Q5TI25 921 aa34.32■■■■□ 3.08
PRKAR1B-202ENST00000400758 IL13P35225 146 aa34.28■■■■□ 3.08
PRKAR1B-202ENST00000400758 RREB1Q92766 1687 aa34.28■■■■□ 3.08
PRKAR1B-202ENST00000400758 CYP27B1O15528 508 aa34.26■■■■□ 3.08
PRKAR1B-202ENST00000400758 SHANK3Q9BYB0 1731 aa34.26■■■■□ 3.07
PRKAR1B-202ENST00000400758 NKX1-1Q15270 411 aaPredicted RBP34.25■■■■□ 3.07
PRKAR1B-202ENST00000400758 PRIM1P49642 420 aaKnown RBP34.24■■■■□ 3.07
PRKAR1B-202ENST00000400758 TXNRD1Q16881 649 aa34.23■■■■□ 3.07
PRKAR1B-202ENST00000400758 PROM2Q8N271 834 aa34.23■■■■□ 3.07
PRKAR1B-202ENST00000400758 PKD1L3Q7Z443 1732 aa34.23■■■■□ 3.07
PRKAR1B-202ENST00000400758 KDRP35968 1356 aa34.23■■■■□ 3.07
PRKAR1B-202ENST00000400758 AMOTQ4VCS5 1084 aa34.22■■■■□ 3.07
PRKAR1B-202ENST00000400758 IFNL2Q8IZJ0 200 aa34.21■■■■□ 3.07
PRKAR1B-202ENST00000400758 SYTL4Q96C24 671 aaPredicted RBP34.21■■■■□ 3.07
PRKAR1B-202ENST00000400758 DIAPH1O60610 1272 aaKnown RBP34.2■■■■□ 3.07
PRKAR1B-202ENST00000400758 PLEKHO1Q53GL0 409 aaPredicted RBP34.2■■■■□ 3.07
PRKAR1B-202ENST00000400758 R3HDM1Q15032 1099 aaKnown RBP34.19■■■■□ 3.06
PRKAR1B-202ENST00000400758 NUP188Q5SRE5 1749 aa34.18■■■■□ 3.06
PRKAR1B-202ENST00000400758 SULT6B1Q6IMI4 303 aa34.18■■■■□ 3.06
PRKAR1B-202ENST00000400758 PSDA5PKW4 1024 aaPredicted RBP34.17■■■■□ 3.06
PRKAR1B-202ENST00000400758 PHKG2P15735 406 aa34.16■■■■□ 3.06
PRKAR1B-202ENST00000400758 SLC27A3Q5K4L6 730 aa34.16■■■■□ 3.06
PRKAR1B-202ENST00000400758 HSP90AB1P08238 724 aaKnown RBP34.15■■■■□ 3.06
PRKAR1B-202ENST00000400758 CNGB1Q14028 1251 aaPredicted RBP34.15■■■■□ 3.06
PRKAR1B-202ENST00000400758 KAT6BQ8WYB5 2073 aa34.15■■■■□ 3.06
PRKAR1B-202ENST00000400758 BTAF1O14981 1849 aa34.14■■■■□ 3.06
PRKAR1B-202ENST00000400758 HMGB2P26583 209 aaKnown RBP34.14■■■■□ 3.06
PRKAR1B-202ENST00000400758 CFAP53Q96M91 514 aa34.14■■■■□ 3.06
PRKAR1B-202ENST00000400758 AEBP1Q8IUX7 1158 aa34.13■■■■□ 3.05
PRKAR1B-202ENST00000400758 DOT1LQ8TEK3 1739 aa34.13■■■■□ 3.05
PRKAR1B-202ENST00000400758 PPP2R1AP30153 589 aa34.09■■■■□ 3.05
PRKAR1B-202ENST00000400758 COL3A1P02461 1466 aaPredicted RBP34.08■■■■□ 3.05
PRKAR1B-202ENST00000400758 STK32BQ9NY57 414 aa34.08■■■■□ 3.05
PRKAR1B-202ENST00000400758 MPRIPQ6WCQ1 1025 aa34.07■■■■□ 3.04
PRKAR1B-202ENST00000400758 DCAF5Q96JK2 942 aa34.07■■■■□ 3.04
PRKAR1B-202ENST00000400758 ZNF530Q6P9A1 599 aaPredicted RBP34.06■■■■□ 3.04
PRKAR1B-202ENST00000400758 SMARCC1Q92922 1105 aaPredicted RBP34.06■■■■□ 3.04
PRKAR1B-202ENST00000400758 C1orf141Q5JVX7 400 aa34.05■■■■□ 3.04
PRKAR1B-202ENST00000400758 ANO8Q9HCE9 1232 aaPredicted RBP34.05■■■■□ 3.04
PRKAR1B-202ENST00000400758 ERVV-2B6SEH9 535 aa34.04■■■■□ 3.04
PRKAR1B-202ENST00000400758 SLC15A2Q16348 729 aa34.04■■■■□ 3.04
PRKAR1B-202ENST00000400758 SRCAPQ6ZRS2 3230 aa34.03■■■■□ 3.04
PRKAR1B-202ENST00000400758 NUDCQ9Y266 331 aa34.03■■■■□ 3.04
PRKAR1B-202ENST00000400758 PIGBQ92521 554 aa34.02■■■■□ 3.04
PRKAR1B-202ENST00000400758 LRRC4BQ9NT99 713 aa34.02■■■■□ 3.04
PRKAR1B-202ENST00000400758 TMOD3Q9NYL9 352 aa34.02■■■■□ 3.04
PRKAR1B-202ENST00000400758 HMOX1P09601 288 aa34.01■■■■□ 3.03
PRKAR1B-202ENST00000400758 DDX10Q13206 875 aaKnown RBP34■■■■□ 3.03
PRKAR1B-202ENST00000400758 U2SURPO15042 1029 aaKnown RBP33.99■■■■□ 3.03
PRKAR1B-202ENST00000400758 CCNL1Q9UK58 526 aaPredicted RBP33.99■■■■□ 3.03
PRKAR1B-202ENST00000400758 RALBP1Q15311 655 aa33.98■■■■□ 3.03
PRKAR1B-202ENST00000400758 PALLDQ8WX93 1383 aa33.98■■■■□ 3.03
PRKAR1B-202ENST00000400758 TOGARAM1Q9Y4F4 1720 aa33.97■■■■□ 3.03
PRKAR1B-202ENST00000400758 AKAP4Q5JQC9 854 aa33.97■■■■□ 3.03
PRKAR1B-202ENST00000400758 LRP5O75197 1615 aa33.96■■■■□ 3.03
PRKAR1B-202ENST00000400758 PAPPAQ13219 1627 aa33.95■■■■□ 3.03
PRKAR1B-202ENST00000400758 LY75O60449 1722 aa33.95■■■■□ 3.03
PRKAR1B-202ENST00000400758 AKT1S1Q96B36 256 aa33.93■■■■□ 3.02
PRKAR1B-202ENST00000400758 ITGB4P16144 1822 aa33.91■■■■□ 3.02
PRKAR1B-202ENST00000400758 KDM6AO15550 1401 aaPredicted RBP33.91■■■■□ 3.02
PRKAR1B-202ENST00000400758 CABP4P57796 275 aa33.9■■■■□ 3.02
PRKAR1B-202ENST00000400758 SPON1Q9HCB6 807 aa33.9■■■■□ 3.02
PRKAR1B-202ENST00000400758 MTHFSDQ2M296 383 aaKnown RBP33.89■■■■□ 3.02
PRKAR1B-202ENST00000400758 ZNF827Q17R98 1081 aa33.88■■■■□ 3.01
PRKAR1B-202ENST00000400758 GAS2L2Q8NHY3 880 aa33.88■■■■□ 3.01
PRKAR1B-202ENST00000400758 FCHSD2O94868 740 aa33.87■■■■□ 3.01
PRKAR1B-202ENST00000400758 U2AF1L5P0DN76 240 aaPredicted RBP33.86■■■■□ 3.01
PRKAR1B-202ENST00000400758 U2AF1Q01081 240 aaKnown RBP eCLIP33.86■■■■□ 3.01
PRKAR1B-202ENST00000400758 ATG3Q9NT62 314 aa33.86■■■■□ 3.01
PRKAR1B-202ENST00000400758 ASAP1Q9ULH1 1129 aa33.86■■■■□ 3.01
PRKAR1B-202ENST00000400758 LOC102724428A0A0B4J2F2 783 aa33.85■■■■□ 3.01
PRKAR1B-202ENST00000400758 SIK1P57059 783 aa33.85■■■■□ 3.01
PRKAR1B-202ENST00000400758 RSPH6AQ9H0K4 717 aa33.85■■■■□ 3.01
PRKAR1B-202ENST00000400758 KCNQ4P56696 695 aa33.84■■■■□ 3.01
PRKAR1B-202ENST00000400758 TFCP2L1Q9NZI6 479 aa33.84■■■■□ 3.01
PRKAR1B-202ENST00000400758 SLC16A10Q8TF71 515 aa33.82■■■■□ 3
PRKAR1B-202ENST00000400758 CASZ1Q86V15 1759 aa33.82■■■■□ 3
PRKAR1B-202ENST00000400758 PRKAR2BP31323 418 aa33.81■■■■□ 3
PRKAR1B-202ENST00000400758 NFATC2IPQ8NCF5 419 aa33.81■■■■□ 3
PRKAR1B-202ENST00000400758 MTFR1LQ9H019 292 aa33.81■■■■□ 3
PRKAR1B-202ENST00000400758 RNMTO43148 476 aaKnown RBP33.8■■■■□ 3
PRKAR1B-202ENST00000400758 SLC52A2Q9HAB3 445 aa33.8■■■■□ 3
PRKAR1B-202ENST00000400758 PDGFDQ9GZP0 370 aaPredicted RBP33.79■■■■□ 3
PRKAR1B-202ENST00000400758 MYBBP1AQ9BQG0 1328 aaKnown RBP33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms