RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 AEBP1Q8IUX7 1158 aa23.66■■□□□ 1.38
SEH1L-202ENST00000399892 OVOS2A0A0G2JMS6 1433 aa23.64■■□□□ 1.38
SEH1L-202ENST00000399892 TNS2Q63HR2 1409 aa23.64■■□□□ 1.38
SEH1L-202ENST00000399892 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
SEH1L-202ENST00000399892 KDRP35968 1356 aa23.63■■□□□ 1.37
SEH1L-202ENST00000399892 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
SEH1L-202ENST00000399892 DDX54Q8TDD1 881 aaKnown RBP23.61■■□□□ 1.37
SEH1L-202ENST00000399892 SPG7Q9UQ90 795 aa23.61■■□□□ 1.37
SEH1L-202ENST00000399892 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
SEH1L-202ENST00000399892 MRS2Q9HD23 443 aa23.61■■□□□ 1.37
SEH1L-202ENST00000399892 EP400Q96L91 3159 aa23.59■■□□□ 1.37
SEH1L-202ENST00000399892 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
SEH1L-202ENST00000399892 PLEKHO1Q53GL0 409 aaPredicted RBP23.59■■□□□ 1.37
SEH1L-202ENST00000399892 PCDH11XQ9BZA7 1347 aa23.58■■□□□ 1.37
SEH1L-202ENST00000399892 PCDH11YQ9BZA8 1340 aa23.58■■□□□ 1.37
SEH1L-202ENST00000399892 NEFMP07197 916 aa23.58■■□□□ 1.37
SEH1L-202ENST00000399892 AMOTQ4VCS5 1084 aa23.58■■□□□ 1.37
SEH1L-202ENST00000399892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.58■■□□□ 1.371e-6■■■□□ 15.6
SEH1L-202ENST00000399892 PKD1L3Q7Z443 1732 aa23.58■■□□□ 1.36
SEH1L-202ENST00000399892 FCHSD2O94868 740 aa23.57■■□□□ 1.36
SEH1L-202ENST00000399892 PLEKHG2Q9H7P9 1386 aa23.57■■□□□ 1.36
SEH1L-202ENST00000399892 PRKAR2BP31323 418 aa23.56■■□□□ 1.36
SEH1L-202ENST00000399892 MARCH10Q8NA82 808 aaPredicted RBP23.56■■□□□ 1.36
SEH1L-202ENST00000399892 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
SEH1L-202ENST00000399892 SHANK3Q9BYB0 1731 aa23.55■■□□□ 1.36
SEH1L-202ENST00000399892 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
SEH1L-202ENST00000399892 FAM196AQ6ZSG2 479 aa23.55■■□□□ 1.36
SEH1L-202ENST00000399892 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
SEH1L-202ENST00000399892 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
SEH1L-202ENST00000399892 ZNF530Q6P9A1 599 aaPredicted RBP23.53■■□□□ 1.36
SEH1L-202ENST00000399892 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
SEH1L-202ENST00000399892 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
SEH1L-202ENST00000399892 CYP27B1O15528 508 aa23.51■■□□□ 1.35
SEH1L-202ENST00000399892 ADAMTS8Q9UP79 889 aa23.49■■□□□ 1.35
SEH1L-202ENST00000399892 GAS2L2Q8NHY3 880 aa23.49■■□□□ 1.35
SEH1L-202ENST00000399892 PHKG2P15735 406 aa23.48■■□□□ 1.35
SEH1L-202ENST00000399892 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
SEH1L-202ENST00000399892 MIER1Q8N108 512 aa23.48■■□□□ 1.35
SEH1L-202ENST00000399892 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
SEH1L-202ENST00000399892 SBF2Q86WG5 1849 aa23.47■■□□□ 1.35
SEH1L-202ENST00000399892 HSP90AB1P08238 724 aaKnown RBP23.47■■□□□ 1.35
SEH1L-202ENST00000399892 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
SEH1L-202ENST00000399892 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
SEH1L-202ENST00000399892 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
SEH1L-202ENST00000399892 ACSBG1Q96GR2 724 aa23.45■■□□□ 1.34
SEH1L-202ENST00000399892 BCL9O00512 1426 aa23.45■■□□□ 1.34
SEH1L-202ENST00000399892 TRIM37O94972 964 aa23.45■■□□□ 1.34
SEH1L-202ENST00000399892 SF3B2Q13435 895 aaKnown RBP23.45■■□□□ 1.34
SEH1L-202ENST00000399892 CCDC146Q8IYE0 955 aa23.45■■□□□ 1.34
SEH1L-202ENST00000399892 SYTL4Q96C24 671 aaPredicted RBP23.45■■□□□ 1.34
SEH1L-202ENST00000399892 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
SEH1L-202ENST00000399892 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
SEH1L-202ENST00000399892 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
SEH1L-202ENST00000399892 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
SEH1L-202ENST00000399892 DCAF5Q96JK2 942 aa23.43■■□□□ 1.34
SEH1L-202ENST00000399892 NKX1-1Q15270 411 aaPredicted RBP23.42■■□□□ 1.34
SEH1L-202ENST00000399892 MPRIPQ6WCQ1 1025 aa23.41■■□□□ 1.34
SEH1L-202ENST00000399892 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
SEH1L-202ENST00000399892 VIRMAQ69YN4 1812 aaKnown RBP23.4■■□□□ 1.34
SEH1L-202ENST00000399892 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
SEH1L-202ENST00000399892 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
SEH1L-202ENST00000399892 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
SEH1L-202ENST00000399892 RTF1Q92541 710 aaKnown RBP23.4■■□□□ 1.34
SEH1L-202ENST00000399892 NHSQ6T4R5 1651 aa23.39■■□□□ 1.34
SEH1L-202ENST00000399892 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
SEH1L-202ENST00000399892 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
SEH1L-202ENST00000399892 DLG5Q8TDM6 1919 aa23.39■■□□□ 1.33
SEH1L-202ENST00000399892 KCNQ2O43526 872 aa23.38■■□□□ 1.33
SEH1L-202ENST00000399892 ITGB4P16144 1822 aa23.38■■□□□ 1.33
SEH1L-202ENST00000399892 NFE2L2Q16236 605 aa23.38■■□□□ 1.33
SEH1L-202ENST00000399892 SCN11AQ9UI33 1791 aa23.38■■□□□ 1.33
SEH1L-202ENST00000399892 TOGARAM1Q9Y4F4 1720 aa23.37■■□□□ 1.33
SEH1L-202ENST00000399892 APBA3O96018 575 aa23.36■■□□□ 1.33
SEH1L-202ENST00000399892 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
SEH1L-202ENST00000399892 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
SEH1L-202ENST00000399892 KDM6AO15550 1401 aaPredicted RBP23.35■■□□□ 1.33
SEH1L-202ENST00000399892 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
SEH1L-202ENST00000399892 CABP4P57796 275 aa23.35■■□□□ 1.33
SEH1L-202ENST00000399892 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
SEH1L-202ENST00000399892 SOCS7O14512 581 aa23.34■■□□□ 1.33
SEH1L-202ENST00000399892 RNMTO43148 476 aaKnown RBP23.34■■□□□ 1.33
SEH1L-202ENST00000399892 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
SEH1L-202ENST00000399892 RIPK4P57078 832 aa23.34■■□□□ 1.33
SEH1L-202ENST00000399892 BTAF1O14981 1849 aa23.34■■□□□ 1.33
SEH1L-202ENST00000399892 BAG6P46379 1132 aa23.33■■□□□ 1.33
SEH1L-202ENST00000399892 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
SEH1L-202ENST00000399892 LGR6Q9HBX8 967 aa23.33■■□□□ 1.33
SEH1L-202ENST00000399892 RRP7AQ9Y3A4 280 aaKnown RBP23.33■■□□□ 1.33
SEH1L-202ENST00000399892 APAF1O14727 1248 aa23.32■■□□□ 1.32
SEH1L-202ENST00000399892 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
SEH1L-202ENST00000399892 TEFQ10587 303 aa23.32■■□□□ 1.32
SEH1L-202ENST00000399892 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
SEH1L-202ENST00000399892 MCM10Q7L590 875 aa23.31■■□□□ 1.32
SEH1L-202ENST00000399892 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
SEH1L-202ENST00000399892 IL17REQ8NFR9 667 aa23.3■■□□□ 1.32
SEH1L-202ENST00000399892 PIGBQ92521 554 aa23.3■■□□□ 1.32
SEH1L-202ENST00000399892 DCTN1Q14203 1278 aa23.29■■□□□ 1.32
SEH1L-202ENST00000399892 SLC52A2Q9HAB3 445 aa23.29■■□□□ 1.32
SEH1L-202ENST00000399892 ADAMTS7Q9UKP4 1686 aa23.28■■□□□ 1.32
SEH1L-202ENST00000399892 DEFB132Q7Z7B7 95 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms