RNA–Protein interactions for RNA: ENST00000399687.3

ABCD1P4-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 4, humanhuman

BASIC

Gene ABCD1P4, Length 604 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P4-201ENST00000399687 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
ABCD1P4-201ENST00000399687 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
ABCD1P4-201ENST00000399687 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
ABCD1P4-201ENST00000399687 UPF1Q92900 1129 aaKnown RBP eCLIP18.39■□□□□ 0.53
ABCD1P4-201ENST00000399687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
ABCD1P4-201ENST00000399687 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.53
ABCD1P4-201ENST00000399687 IL13P35225 146 aa18.38■□□□□ 0.53
ABCD1P4-201ENST00000399687 MYBBP1AQ9BQG0 1328 aaKnown RBP18.38■□□□□ 0.53
ABCD1P4-201ENST00000399687 KDRP35968 1356 aa18.38■□□□□ 0.53
ABCD1P4-201ENST00000399687 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
ABCD1P4-201ENST00000399687 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
ABCD1P4-201ENST00000399687 SBF2Q86WG5 1849 aa18.36■□□□□ 0.53
ABCD1P4-201ENST00000399687 TNS1Q9HBL0 1735 aaKnown RBP18.36■□□□□ 0.53
ABCD1P4-201ENST00000399687 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 BAG6P46379 1132 aa18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 SULT6B1Q6IMI4 303 aa18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 MARCH10Q8NA82 808 aaPredicted RBP18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
ABCD1P4-201ENST00000399687 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
ABCD1P4-201ENST00000399687 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
ABCD1P4-201ENST00000399687 RGPD3A6NKT7 1758 aaPredicted RBP18.33■□□□□ 0.53
ABCD1P4-201ENST00000399687 RGPD4Q7Z3J3 1758 aa18.33■□□□□ 0.53
ABCD1P4-201ENST00000399687 DOT1LQ8TEK3 1739 aa18.33■□□□□ 0.52
ABCD1P4-201ENST00000399687 ANP32CO43423 234 aa18.33■□□□□ 0.52
ABCD1P4-201ENST00000399687 NEFMP07197 916 aa18.33■□□□□ 0.52
ABCD1P4-201ENST00000399687 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.52
ABCD1P4-201ENST00000399687 HSP90AB1P08238 724 aaKnown RBP18.32■□□□□ 0.52
ABCD1P4-201ENST00000399687 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
ABCD1P4-201ENST00000399687 TRIM37O94972 964 aa18.31■□□□□ 0.52
ABCD1P4-201ENST00000399687 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
ABCD1P4-201ENST00000399687 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
ABCD1P4-201ENST00000399687 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
ABCD1P4-201ENST00000399687 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
ABCD1P4-201ENST00000399687 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
ABCD1P4-201ENST00000399687 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
ABCD1P4-201ENST00000399687 AEBP1Q8IUX7 1158 aa18.29■□□□□ 0.52
ABCD1P4-201ENST00000399687 HMOX1P09601 288 aa18.28■□□□□ 0.52
ABCD1P4-201ENST00000399687 APBA3O96018 575 aa18.27■□□□□ 0.52
ABCD1P4-201ENST00000399687 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
ABCD1P4-201ENST00000399687 BTAF1O14981 1849 aa18.26■□□□□ 0.51
ABCD1P4-201ENST00000399687 FCHSD2O94868 740 aa18.26■□□□□ 0.51
ABCD1P4-201ENST00000399687 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
ABCD1P4-201ENST00000399687 CYP27B1O15528 508 aa18.25■□□□□ 0.51
ABCD1P4-201ENST00000399687 PHKG2P15735 406 aa18.25■□□□□ 0.51
ABCD1P4-201ENST00000399687 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
ABCD1P4-201ENST00000399687 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
ABCD1P4-201ENST00000399687 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
ABCD1P4-201ENST00000399687 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
ABCD1P4-201ENST00000399687 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
ABCD1P4-201ENST00000399687 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
ABCD1P4-201ENST00000399687 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
ABCD1P4-201ENST00000399687 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
ABCD1P4-201ENST00000399687 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
ABCD1P4-201ENST00000399687 ITGB4P16144 1822 aa18.21■□□□□ 0.51
ABCD1P4-201ENST00000399687 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
ABCD1P4-201ENST00000399687 PLSCR1O15162 318 aa18.21■□□□□ 0.51
ABCD1P4-201ENST00000399687 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
ABCD1P4-201ENST00000399687 RREB1Q92766 1687 aa18.21■□□□□ 0.51
ABCD1P4-201ENST00000399687 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
ABCD1P4-201ENST00000399687 PRIM1P49642 420 aaKnown RBP18.2■□□□□ 0.5
ABCD1P4-201ENST00000399687 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
ABCD1P4-201ENST00000399687 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
ABCD1P4-201ENST00000399687 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
ABCD1P4-201ENST00000399687 DEFB132Q7Z7B7 95 aa18.19■□□□□ 0.5
ABCD1P4-201ENST00000399687 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
ABCD1P4-201ENST00000399687 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
ABCD1P4-201ENST00000399687 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
ABCD1P4-201ENST00000399687 KCNQ2O43526 872 aa18.17■□□□□ 0.5
ABCD1P4-201ENST00000399687 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
ABCD1P4-201ENST00000399687 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
ABCD1P4-201ENST00000399687 MPRIPQ6WCQ1 1025 aa18.16■□□□□ 0.5
ABCD1P4-201ENST00000399687 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
ABCD1P4-201ENST00000399687 LY75O60449 1722 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 CABP4P57796 275 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 SLC27A3Q5K4L6 730 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 NBPF14Q5TI25 921 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 CAMKK2Q96RR4 588 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
ABCD1P4-201ENST00000399687 MRC1P22897 1456 aa18.14■□□□□ 0.5
ABCD1P4-201ENST00000399687 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
ABCD1P4-201ENST00000399687 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
ABCD1P4-201ENST00000399687 LMOD3Q0VAK6 560 aa18.12■□□□□ 0.49
ABCD1P4-201ENST00000399687 TEFQ10587 303 aa18.12■□□□□ 0.49
ABCD1P4-201ENST00000399687 PALLDQ8WX93 1383 aa18.12■□□□□ 0.49
ABCD1P4-201ENST00000399687 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
ABCD1P4-201ENST00000399687 TXNRD1Q16881 649 aa18.11■□□□□ 0.49
ABCD1P4-201ENST00000399687 PTF1AQ7RTS3 328 aa18.1■□□□□ 0.49
ABCD1P4-201ENST00000399687 PIGBQ92521 554 aa18.1■□□□□ 0.49
ABCD1P4-201ENST00000399687 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
ABCD1P4-201ENST00000399687 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 DLG5Q8TDM6 1919 aa18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
ABCD1P4-201ENST00000399687 NFE2L2Q16236 605 aa18.08■□□□□ 0.48
ABCD1P4-201ENST00000399687 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms