RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 RBM25P49756 843 aaKnown RBP18.9■□□□□ 0.62
ITSN1-209ENST00000399352 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 CASQ1P31415 396 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 CCDC113Q9H0I3 377 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 GOLGA6L10A0A0M3HER8 536 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
ITSN1-209ENST00000399352 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
ITSN1-209ENST00000399352 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.9■□□□□ 0.62
ITSN1-209ENST00000399352 UBE2Q2Q8WVN8 375 aa18.89■□□□□ 0.62
ITSN1-209ENST00000399352 TBC1D2Q9BYX2 928 aa18.89■□□□□ 0.62
ITSN1-209ENST00000399352 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.62
ITSN1-209ENST00000399352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.61
ITSN1-209ENST00000399352 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
ITSN1-209ENST00000399352 MAP2K1Q02750 393 aaPredicted RBP18.89■□□□□ 0.61
ITSN1-209ENST00000399352 RNF187Q5TA31 235 aaPredicted RBP18.89■□□□□ 0.61
ITSN1-209ENST00000399352 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
ITSN1-209ENST00000399352 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
ITSN1-209ENST00000399352 KIF5CO60282 957 aa18.88■□□□□ 0.61
ITSN1-209ENST00000399352 CKAP2LQ8IYA6 745 aa18.88■□□□□ 0.61
ITSN1-209ENST00000399352 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
ITSN1-209ENST00000399352 ZFP91Q96JP5 570 aaPredicted RBP18.87■□□□□ 0.61
ITSN1-209ENST00000399352 FKBP4Q02790 459 aaKnown RBP eCLIP18.87■□□□□ 0.61
ITSN1-209ENST00000399352 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
ITSN1-209ENST00000399352 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
ITSN1-209ENST00000399352 NBPF8Q3BBV2 869 aa18.87■□□□□ 0.61
ITSN1-209ENST00000399352 NUTM1Q86Y26 1132 aa18.87■□□□□ 0.61
ITSN1-209ENST00000399352 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
ITSN1-209ENST00000399352 CDKL5O76039 1030 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 MAP9Q49MG5 647 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 STAC3Q96MF2 364 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 GBP2P32456 591 aaPredicted RBP18.86■□□□□ 0.61
ITSN1-209ENST00000399352 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
ITSN1-209ENST00000399352 EXOC6BQ9Y2D4 811 aa18.86■□□□□ 0.61
ITSN1-209ENST00000399352 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
ITSN1-209ENST00000399352 GDPD2Q9HCC8 539 aa18.85■□□□□ 0.61
ITSN1-209ENST00000399352 PIBF1Q8WXW3 757 aa18.85■□□□□ 0.61
ITSN1-209ENST00000399352 DNA2P51530 1060 aa18.85■□□□□ 0.61
ITSN1-209ENST00000399352 WIZO95785 1651 aa18.84■□□□□ 0.61
ITSN1-209ENST00000399352 KRT32Q14532 448 aa18.84■□□□□ 0.61
ITSN1-209ENST00000399352 ANKRD50Q9ULJ7 1429 aa18.84■□□□□ 0.61
ITSN1-209ENST00000399352 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
ITSN1-209ENST00000399352 ADCY5O95622 1261 aa18.83■□□□□ 0.61
ITSN1-209ENST00000399352 LMAN1P49257 510 aa18.83■□□□□ 0.61
ITSN1-209ENST00000399352 SMARCA5O60264 1052 aaPredicted RBP18.83■□□□□ 0.61
ITSN1-209ENST00000399352 SPA17Q15506 151 aa18.83■□□□□ 0.6
ITSN1-209ENST00000399352 KRI1Q8N9T8 703 aaKnown RBP18.83■□□□□ 0.6
ITSN1-209ENST00000399352 SMARCC1Q92922 1105 aaPredicted RBP18.83■□□□□ 0.6
ITSN1-209ENST00000399352 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
ITSN1-209ENST00000399352 SLC26A8Q96RN1 970 aa18.83■□□□□ 0.6
ITSN1-209ENST00000399352 SLFN5Q08AF3 891 aa18.83■□□□□ 0.6
ITSN1-209ENST00000399352 BCCIPQ9P287 314 aaKnown RBP eCLIP18.83■□□□□ 0.6
ITSN1-209ENST00000399352 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
ITSN1-209ENST00000399352 CPLX3Q8WVH0 158 aa18.82■□□□□ 0.6
ITSN1-209ENST00000399352 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
ITSN1-209ENST00000399352 RPAP2Q8IXW5 612 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-209ENST00000399352 ZNF397Q8NF99 534 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-209ENST00000399352 SCAND2PQ9GZW5 306 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-209ENST00000399352 BMP2KQ9NSY1 1161 aaPredicted RBP18.82■□□□□ 0.6
ITSN1-209ENST00000399352 DYNC1I1O14576 645 aa18.82■□□□□ 0.6
ITSN1-209ENST00000399352 SSR1P43307 286 aaKnown RBP18.81■□□□□ 0.6
ITSN1-209ENST00000399352 RBM27Q9P2N5 1060 aaKnown RBP18.81■□□□□ 0.6
ITSN1-209ENST00000399352 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
ITSN1-209ENST00000399352 LUZP1Q86V48 1076 aa18.81■□□□□ 0.6
ITSN1-209ENST00000399352 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
ITSN1-209ENST00000399352 IFFO1Q0D2I5 559 aa18.81■□□□□ 0.6
ITSN1-209ENST00000399352 UBAC1Q9BSL1 405 aa18.81■□□□□ 0.6
ITSN1-209ENST00000399352 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
ITSN1-209ENST00000399352 PDIA4P13667 645 aaKnown RBP18.8■□□□□ 0.6
ITSN1-209ENST00000399352 GUCY1B3Q02153 619 aa18.8■□□□□ 0.6
ITSN1-209ENST00000399352 CTNNA3Q9UI47 895 aa18.8■□□□□ 0.6
ITSN1-209ENST00000399352 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
ITSN1-209ENST00000399352 MYL6BP14649 208 aa18.79■□□□□ 0.6
ITSN1-209ENST00000399352 TDO2P48775 406 aa18.79■□□□□ 0.6
ITSN1-209ENST00000399352 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
ITSN1-209ENST00000399352 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
ITSN1-209ENST00000399352 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
ITSN1-209ENST00000399352 MICALCLQ6ZW33 695 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 GOPCQ9HD26 462 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 GNL3LQ9NVN8 582 aaKnown RBP18.78■□□□□ 0.6
ITSN1-209ENST00000399352 MCM3P25205 808 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 TMC6Q7Z403 805 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 MX1P20591 662 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 PTPRGP23470 1445 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 MCM5P33992 734 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 TIGD1Q96MW7 591 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 CCDC178Q5BJE1 867 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 FAM107BQ9H098 131 aa18.78■□□□□ 0.6
ITSN1-209ENST00000399352 BMS1Q14692 1282 aaKnown RBP18.77■□□□□ 0.6
ITSN1-209ENST00000399352 SNW1Q13573 536 aaKnown RBP18.77■□□□□ 0.59
ITSN1-209ENST00000399352 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.59
ITSN1-209ENST00000399352 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 ZNF830Q96NB3 372 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms