RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ABCC6O95255 1503 aa29.88■■■□□ 2.37
CDH23-206ENST00000398842 LRRC37A3O60309 1634 aa29.88■■■□□ 2.37
CDH23-206ENST00000398842 CHL1O00533 1208 aa29.87■■■□□ 2.37
CDH23-206ENST00000398842 CABLES1Q8TDN4 633 aa29.87■■■□□ 2.37
CDH23-206ENST00000398842 ALDH1L2Q3SY69 923 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 RTF1Q92541 710 aaKnown RBP29.86■■■□□ 2.37
CDH23-206ENST00000398842 SMC4Q9NTJ3 1288 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 VAMP4O75379 141 aa29.85■■■□□ 2.37
CDH23-206ENST00000398842 CERKQ8TCT0 537 aa29.85■■■□□ 2.37
CDH23-206ENST00000398842 CPDO75976 1380 aa29.84■■■□□ 2.37
CDH23-206ENST00000398842 MAP3K5Q99683 1374 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 ERBB3P21860 1342 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 GNAT3A8MTJ3 354 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 TOM1O60784 492 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 TSPYL6Q8N831 410 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 PANK1Q8TE04 598 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 ROBO1Q9Y6N7 1651 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 UBAP1LF5GYI3 381 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 PIP4K2BP78356 416 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 ZKSCAN2Q63HK3 967 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 C8orf58Q8NAV2 365 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 BRPF1P55201 1214 aaPredicted RBP29.8■■■□□ 2.36
CDH23-206ENST00000398842 TNNQ9UQP3 1299 aa29.8■■■□□ 2.36
CDH23-206ENST00000398842 RLBP1P12271 317 aa29.79■■■□□ 2.36
CDH23-206ENST00000398842 TWISTNBQ3B726 338 aaPredicted RBP29.79■■■□□ 2.36
CDH23-206ENST00000398842 ABCA3Q99758 1704 aa29.78■■■□□ 2.36
CDH23-206ENST00000398842 FAM208AQ9UK61 1670 aaKnown RBP29.78■■■□□ 2.36
CDH23-206ENST00000398842 COG6Q9Y2V7 657 aa29.78■■■□□ 2.36
CDH23-206ENST00000398842 KIAA0232Q92628 1395 aa29.77■■■□□ 2.36
CDH23-206ENST00000398842 KIF16BQ96L93 1317 aa29.76■■■□□ 2.36
CDH23-206ENST00000398842 IL17REQ8NFR9 667 aa29.76■■■□□ 2.35
CDH23-206ENST00000398842 MS4A1P11836 297 aa29.75■■■□□ 2.35
CDH23-206ENST00000398842 NOB1Q9ULX3 412 aaKnown RBP29.75■■■□□ 2.35
CDH23-206ENST00000398842 ELL2O00472 640 aaPredicted RBP29.75■■■□□ 2.35
CDH23-206ENST00000398842 PLEKHO1Q53GL0 409 aaPredicted RBP29.74■■■□□ 2.35
CDH23-206ENST00000398842 TRIM27P14373 513 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 CHRNA2Q15822 529 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 AMOTQ4VCS5 1084 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 ATF7IPQ6VMQ6 1270 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 DZIP1LQ8IYY4 767 aaKnown RBP29.73■■■□□ 2.35
CDH23-206ENST00000398842 MRPL50Q8N5N7 158 aaKnown RBP29.73■■■□□ 2.35
CDH23-206ENST00000398842 CLUAP1Q96AJ1 413 aa29.72■■■□□ 2.35
CDH23-206ENST00000398842 TSHZ2Q9NRE2 1034 aa29.72■■■□□ 2.35
CDH23-206ENST00000398842 CEMIPQ8WUJ3 1361 aa29.71■■■□□ 2.35
CDH23-206ENST00000398842 IPO8O15397 1037 aaKnown RBP29.71■■■□□ 2.35
CDH23-206ENST00000398842 TSPYL4Q9UJ04 414 aa29.71■■■□□ 2.35
CDH23-206ENST00000398842 MIS18AQ9NYP9 233 aa29.7■■■□□ 2.35
CDH23-206ENST00000398842 AAMPQ13685 434 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 KRT24Q2M2I5 525 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 KDM2BQ8NHM5 1336 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 MVPQ14764 893 aaKnown RBP29.69■■■□□ 2.34
CDH23-206ENST00000398842 AKAP4Q5JQC9 854 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 FTSJ3Q8IY81 847 aaKnown RBP29.69■■■□□ 2.34
CDH23-206ENST00000398842 BABAM1Q9NWV8 329 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 VIRMAQ69YN4 1812 aaKnown RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 HAP1P54257 671 aaPredicted RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 ZNF530Q6P9A1 599 aaPredicted RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 NLRP2Q9NX02 1062 aa29.67■■■□□ 2.34
CDH23-206ENST00000398842 TAF7Q15545 349 aaPredicted RBP29.66■■■□□ 2.34
CDH23-206ENST00000398842 ARHGAP45Q92619 1136 aa29.66■■■□□ 2.34
CDH23-206ENST00000398842 AHDC1Q5TGY3 1603 aaPredicted RBP29.66■■■□□ 2.34
CDH23-206ENST00000398842 PRDM11Q9NQV5 511 aa29.64■■■□□ 2.34
CDH23-206ENST00000398842 CSB-PGBD3P0DP91 1061 aa29.64■■■□□ 2.34
CDH23-206ENST00000398842 PLEKHG2Q9H7P9 1386 aa29.63■■■□□ 2.33
CDH23-206ENST00000398842 CENPQQ7L2Z9 268 aaPredicted RBP29.63■■■□□ 2.33
CDH23-206ENST00000398842 LGR6Q9HBX8 967 aa29.63■■■□□ 2.33
CDH23-206ENST00000398842 ADAMTS7Q9UKP4 1686 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 TCERG1O14776 1098 aaKnown RBP29.62■■■□□ 2.33
CDH23-206ENST00000398842 OVOS2A0A0G2JMS6 1433 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 RAPGEF4Q8WZA2 1011 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 C1orf141Q5JVX7 400 aa29.61■■■□□ 2.33
CDH23-206ENST00000398842 MEGF6O75095 1541 aa29.61■■■□□ 2.33
CDH23-206ENST00000398842 KDM3BQ7LBC6 1761 aa29.6■■■□□ 2.33
CDH23-206ENST00000398842 TMEM57Q8N5G2 664 aa29.59■■■□□ 2.33
CDH23-206ENST00000398842 PHLPP1O60346 1717 aa29.59■■■□□ 2.33
CDH23-206ENST00000398842 COL5A2P05997 1499 aaPredicted RBP29.59■■■□□ 2.33
CDH23-206ENST00000398842 RNMTO43148 476 aaKnown RBP29.58■■■□□ 2.33
CDH23-206ENST00000398842 TATP17735 454 aaPredicted RBP29.58■■■□□ 2.33
CDH23-206ENST00000398842 DDX19BQ9UMR2 479 aa29.58■■■□□ 2.33
CDH23-206ENST00000398842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDH23-206ENST00000398842 PKD1L3Q7Z443 1732 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 WDR17Q8IZU2 1322 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 MPRIPQ6WCQ1 1025 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 COL22A1Q8NFW1 1626 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 SIPA1L3O60292 1781 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 ITPRIPQ8IWB1 547 aa29.56■■■□□ 2.32
CDH23-206ENST00000398842 SOS1Q07889 1333 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 ABCC4O15439 1325 aa29.55■■■□□ 2.32
CDH23-206ENST00000398842 API5Q9BZZ5 524 aaKnown RBP29.54■■■□□ 2.32
CDH23-206ENST00000398842 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
CDH23-206ENST00000398842 IGHDP01880 384 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 TEFQ10587 303 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 SPG7Q9UQ90 795 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 SCN11AQ9UI33 1791 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
CDH23-206ENST00000398842 PARP4Q9UKK3 1724 aaKnown RBP29.5■■■□□ 2.31
CDH23-206ENST00000398842 RGS12O14924 1447 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 CACNA1FO60840 1977 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 PHKG2P15735 406 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms