RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ABCC6O95255 1503 aa29.88■■■□□ 2.37
CDH23-206ENST00000398842 LRRC37A3O60309 1634 aa29.88■■■□□ 2.37
CDH23-206ENST00000398842 CHL1O00533 1208 aa29.87■■■□□ 2.37
CDH23-206ENST00000398842 CABLES1Q8TDN4 633 aa29.87■■■□□ 2.37
CDH23-206ENST00000398842 ALDH1L2Q3SY69 923 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 RTF1Q92541 710 aaKnown RBP29.86■■■□□ 2.37
CDH23-206ENST00000398842 SMC4Q9NTJ3 1288 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
CDH23-206ENST00000398842 VAMP4O75379 141 aa29.85■■■□□ 2.37
CDH23-206ENST00000398842 CERKQ8TCT0 537 aa29.85■■■□□ 2.37
CDH23-206ENST00000398842 CPDO75976 1380 aa29.84■■■□□ 2.37
CDH23-206ENST00000398842 MAP3K5Q99683 1374 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 ERBB3P21860 1342 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 GNAT3A8MTJ3 354 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 TOM1O60784 492 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 TSPYL6Q8N831 410 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 PANK1Q8TE04 598 aa29.83■■■□□ 2.37
CDH23-206ENST00000398842 ROBO1Q9Y6N7 1651 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 UBAP1LF5GYI3 381 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 PIP4K2BP78356 416 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 ZKSCAN2Q63HK3 967 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 C8orf58Q8NAV2 365 aa29.81■■■□□ 2.36
CDH23-206ENST00000398842 BRPF1P55201 1214 aaPredicted RBP29.8■■■□□ 2.36
CDH23-206ENST00000398842 TNNQ9UQP3 1299 aa29.8■■■□□ 2.36
CDH23-206ENST00000398842 RLBP1P12271 317 aa29.79■■■□□ 2.36
CDH23-206ENST00000398842 TWISTNBQ3B726 338 aaPredicted RBP29.79■■■□□ 2.36
CDH23-206ENST00000398842 ABCA3Q99758 1704 aa29.78■■■□□ 2.36
CDH23-206ENST00000398842 FAM208AQ9UK61 1670 aaKnown RBP29.78■■■□□ 2.36
CDH23-206ENST00000398842 COG6Q9Y2V7 657 aa29.78■■■□□ 2.36
CDH23-206ENST00000398842 KIAA0232Q92628 1395 aa29.77■■■□□ 2.36
CDH23-206ENST00000398842 KIF16BQ96L93 1317 aa29.76■■■□□ 2.36
CDH23-206ENST00000398842 IL17REQ8NFR9 667 aa29.76■■■□□ 2.35
CDH23-206ENST00000398842 MS4A1P11836 297 aa29.75■■■□□ 2.35
CDH23-206ENST00000398842 NOB1Q9ULX3 412 aaKnown RBP29.75■■■□□ 2.35
CDH23-206ENST00000398842 ELL2O00472 640 aaPredicted RBP29.75■■■□□ 2.35
CDH23-206ENST00000398842 PLEKHO1Q53GL0 409 aaPredicted RBP29.74■■■□□ 2.35
CDH23-206ENST00000398842 TRIM27P14373 513 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 CHRNA2Q15822 529 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 AMOTQ4VCS5 1084 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 ATF7IPQ6VMQ6 1270 aa29.73■■■□□ 2.35
CDH23-206ENST00000398842 DZIP1LQ8IYY4 767 aaKnown RBP29.73■■■□□ 2.35
CDH23-206ENST00000398842 MRPL50Q8N5N7 158 aaKnown RBP29.73■■■□□ 2.35
CDH23-206ENST00000398842 CLUAP1Q96AJ1 413 aa29.72■■■□□ 2.35
CDH23-206ENST00000398842 TSHZ2Q9NRE2 1034 aa29.72■■■□□ 2.35
CDH23-206ENST00000398842 CEMIPQ8WUJ3 1361 aa29.71■■■□□ 2.35
CDH23-206ENST00000398842 IPO8O15397 1037 aaKnown RBP29.71■■■□□ 2.35
CDH23-206ENST00000398842 TSPYL4Q9UJ04 414 aa29.71■■■□□ 2.35
CDH23-206ENST00000398842 MIS18AQ9NYP9 233 aa29.7■■■□□ 2.35
CDH23-206ENST00000398842 AAMPQ13685 434 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 KRT24Q2M2I5 525 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 KDM2BQ8NHM5 1336 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 MVPQ14764 893 aaKnown RBP29.69■■■□□ 2.34
CDH23-206ENST00000398842 AKAP4Q5JQC9 854 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 FTSJ3Q8IY81 847 aaKnown RBP29.69■■■□□ 2.34
CDH23-206ENST00000398842 BABAM1Q9NWV8 329 aa29.69■■■□□ 2.34
CDH23-206ENST00000398842 VIRMAQ69YN4 1812 aaKnown RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 HAP1P54257 671 aaPredicted RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 ZNF530Q6P9A1 599 aaPredicted RBP29.68■■■□□ 2.34
CDH23-206ENST00000398842 NLRP2Q9NX02 1062 aa29.67■■■□□ 2.34
CDH23-206ENST00000398842 TAF7Q15545 349 aaPredicted RBP29.66■■■□□ 2.34
CDH23-206ENST00000398842 ARHGAP45Q92619 1136 aa29.66■■■□□ 2.34
CDH23-206ENST00000398842 AHDC1Q5TGY3 1603 aaPredicted RBP29.66■■■□□ 2.34
CDH23-206ENST00000398842 PRDM11Q9NQV5 511 aa29.64■■■□□ 2.34
CDH23-206ENST00000398842 CSB-PGBD3P0DP91 1061 aa29.64■■■□□ 2.34
CDH23-206ENST00000398842 PLEKHG2Q9H7P9 1386 aa29.63■■■□□ 2.33
CDH23-206ENST00000398842 CENPQQ7L2Z9 268 aaPredicted RBP29.63■■■□□ 2.33
CDH23-206ENST00000398842 LGR6Q9HBX8 967 aa29.63■■■□□ 2.33
CDH23-206ENST00000398842 ADAMTS7Q9UKP4 1686 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 TCERG1O14776 1098 aaKnown RBP29.62■■■□□ 2.33
CDH23-206ENST00000398842 OVOS2A0A0G2JMS6 1433 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 RAPGEF4Q8WZA2 1011 aa29.62■■■□□ 2.33
CDH23-206ENST00000398842 C1orf141Q5JVX7 400 aa29.61■■■□□ 2.33
CDH23-206ENST00000398842 MEGF6O75095 1541 aa29.61■■■□□ 2.33
CDH23-206ENST00000398842 KDM3BQ7LBC6 1761 aa29.6■■■□□ 2.33
CDH23-206ENST00000398842 TMEM57Q8N5G2 664 aa29.59■■■□□ 2.33
CDH23-206ENST00000398842 PHLPP1O60346 1717 aa29.59■■■□□ 2.33
CDH23-206ENST00000398842 COL5A2P05997 1499 aaPredicted RBP29.59■■■□□ 2.33
CDH23-206ENST00000398842 RNMTO43148 476 aaKnown RBP29.58■■■□□ 2.33
CDH23-206ENST00000398842 TATP17735 454 aaPredicted RBP29.58■■■□□ 2.33
CDH23-206ENST00000398842 DDX19BQ9UMR2 479 aa29.58■■■□□ 2.33
CDH23-206ENST00000398842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDH23-206ENST00000398842 PKD1L3Q7Z443 1732 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 WDR17Q8IZU2 1322 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 MPRIPQ6WCQ1 1025 aa29.57■■■□□ 2.32
CDH23-206ENST00000398842 COL22A1Q8NFW1 1626 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 SIPA1L3O60292 1781 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 ITPRIPQ8IWB1 547 aa29.56■■■□□ 2.32
CDH23-206ENST00000398842 SOS1Q07889 1333 aaPredicted RBP29.56■■■□□ 2.32
CDH23-206ENST00000398842 ABCC4O15439 1325 aa29.55■■■□□ 2.32
CDH23-206ENST00000398842 API5Q9BZZ5 524 aaKnown RBP29.54■■■□□ 2.32
CDH23-206ENST00000398842 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
CDH23-206ENST00000398842 IGHDP01880 384 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 TEFQ10587 303 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 SPG7Q9UQ90 795 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 SCN11AQ9UI33 1791 aa29.53■■■□□ 2.32
CDH23-206ENST00000398842 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
CDH23-206ENST00000398842 PARP4Q9UKK3 1724 aaKnown RBP29.5■■■□□ 2.31
CDH23-206ENST00000398842 RGS12O14924 1447 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 CACNA1FO60840 1977 aa29.49■■■□□ 2.31
CDH23-206ENST00000398842 PHKG2P15735 406 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms