RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FOXD4L3Q6VB84 417 aaPredicted RBP6.74□□□□□ -1.33
CD47-203ENST00000398258 ENAMQ9NRM1 1142 aa6.74□□□□□ -1.33
CD47-203ENST00000398258 ZMYND10O75800 440 aa6.73□□□□□ -1.33
CD47-203ENST00000398258 ADH1AP07327 375 aa6.73□□□□□ -1.33
CD47-203ENST00000398258 HAP1P54257 671 aaPredicted RBP6.73□□□□□ -1.33
CD47-203ENST00000398258 PRICKLE2Q7Z3G6 844 aa6.73□□□□□ -1.33
CD47-203ENST00000398258 NEDD1Q8NHV4 660 aa6.73□□□□□ -1.33
CD47-203ENST00000398258 NUTM2BA6NNL0 878 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 NUTM2EB1AL46 878 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 PTGIRP43119 386 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 DIXDC1Q155Q3 683 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 NUTM2DQ5VT03 806 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 FBXO31Q5XUX0 539 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 NUTM2AQ8IVF1 878 aaPredicted RBP6.72□□□□□ -1.33
CD47-203ENST00000398258 TRIM22Q8IYM9 498 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 SLC10A4Q96EP9 437 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 ARHGAP9Q9BRR9 750 aa6.72□□□□□ -1.33
CD47-203ENST00000398258 SHISA8B8ZZ34 492 aa6.71□□□□□ -1.34
CD47-203ENST00000398258 CTDSPL2Q05D32 466 aa6.71□□□□□ -1.34
CD47-203ENST00000398258 DHX9Q08211 1270 aaKnown RBP6.71□□□□□ -1.34
CD47-203ENST00000398258 PDXDC2PQ6P474 469 aa6.71□□□□□ -1.34
CD47-203ENST00000398258 GPKOWQ92917 476 aaPredicted RBP eCLIP6.71□□□□□ -1.342e-6■■■□□ 15.9
CD47-203ENST00000398258 GTPBP3Q969Y2 492 aaKnown RBP6.71□□□□□ -1.34
CD47-203ENST00000398258 THBS1P07996 1170 aa6.7□□□□□ -1.34
CD47-203ENST00000398258 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
CD47-203ENST00000398258 LRRN4Q8WUT4 740 aa6.7□□□□□ -1.34
CD47-203ENST00000398258 ERVH48-1M5A8F1 160 aa6.69□□□□□ -1.34
CD47-203ENST00000398258 OIP5O43482 229 aa6.69□□□□□ -1.34
CD47-203ENST00000398258 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
CD47-203ENST00000398258 RAB15P59190 212 aa6.69□□□□□ -1.34
CD47-203ENST00000398258 LAMC2Q13753 1193 aa6.69□□□□□ -1.34
CD47-203ENST00000398258 PODNQ7Z5L7 613 aa6.69□□□□□ -1.34
CD47-203ENST00000398258 TULP1O00294 542 aaPredicted RBP6.68□□□□□ -1.34
CD47-203ENST00000398258 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
CD47-203ENST00000398258 TRIM66O15016 1216 aa6.67□□□□□ -1.34
CD47-203ENST00000398258 RNF144AP50876 292 aaPredicted RBP6.67□□□□□ -1.34
CD47-203ENST00000398258 HELBQ8NG08 1087 aaPredicted RBP6.67□□□□□ -1.34
CD47-203ENST00000398258 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
CD47-203ENST00000398258 SEMA6BQ9H3T3 888 aa6.67□□□□□ -1.34
CD47-203ENST00000398258 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
CD47-203ENST00000398258 CDV3Q9UKY7 258 aaKnown RBP6.67□□□□□ -1.34
CD47-203ENST00000398258 NR6A1Q15406 480 aa6.66□□□□□ -1.34
CD47-203ENST00000398258 RIPOR1Q6ZS17 1223 aa6.66□□□□□ -1.34
CD47-203ENST00000398258 ZBTB33Q86T24 672 aa6.66□□□□□ -1.34
CD47-203ENST00000398258 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
CD47-203ENST00000398258 ZC3H15Q8WU90 426 aaKnown RBP6.66□□□□□ -1.34
CD47-203ENST00000398258 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
CD47-203ENST00000398258 ARTNQ5T4W7 220 aa6.65□□□□□ -1.34
CD47-203ENST00000398258 ZFP64Q9NPA5 681 aa6.65□□□□□ -1.34
CD47-203ENST00000398258 LRRC4BQ9NT99 713 aa6.65□□□□□ -1.34
CD47-203ENST00000398258 EPS8L1Q8TE68 723 aa6.64□□□□□ -1.35
CD47-203ENST00000398258 GMCL1Q96IK5 515 aa6.64□□□□□ -1.35
CD47-203ENST00000398258 CYLDQ9NQC7 956 aa6.64□□□□□ -1.35
CD47-203ENST00000398258 ESPNB1AK53 854 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 MX2P20592 715 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 POU4F2Q12837 409 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 LINC00114Q6XXX2 140 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 DYRK1BQ9Y463 629 aa6.63□□□□□ -1.35
CD47-203ENST00000398258 C1QTNF9BB2RNN3 333 aa6.62□□□□□ -1.35
CD47-203ENST00000398258 CD163Q86VB7 1156 aa6.62□□□□□ -1.35
CD47-203ENST00000398258 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
CD47-203ENST00000398258 OXCT2Q9BYC2 517 aaPredicted RBP6.62□□□□□ -1.35
CD47-203ENST00000398258 CHRNA4P43681 627 aa6.61□□□□□ -1.35
CD47-203ENST00000398258 CLK2P49760 499 aaKnown RBP6.61□□□□□ -1.35
CD47-203ENST00000398258 YBX3P16989 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
CD47-203ENST00000398258 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
CD47-203ENST00000398258 FOXR1Q6PIV2 292 aa6.6□□□□□ -1.35
CD47-203ENST00000398258 KLRG1Q96E93 195 aa6.6□□□□□ -1.35
CD47-203ENST00000398258 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
CD47-203ENST00000398258 MKL2Q9ULH7 1088 aa6.6□□□□□ -1.35
CD47-203ENST00000398258 MEN1O00255 615 aa6.59□□□□□ -1.35
CD47-203ENST00000398258 PTK2Q05397 1052 aa6.59□□□□□ -1.35
CD47-203ENST00000398258 GRIN2CQ14957 1233 aa6.59□□□□□ -1.35
CD47-203ENST00000398258 NBPF20Q3BBV1 942 aa6.59□□□□□ -1.35
CD47-203ENST00000398258 ZC3H4Q9UPT8 1303 aaKnown RBP6.58□□□□□ -1.36
CD47-203ENST00000398258 A0A1W2PRU2 124 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 C2CD2LO14523 706 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
CD47-203ENST00000398258 NBPF11Q86T75 865 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 TRERF1Q96PN7 1200 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 GRIP2Q9C0E4 1043 aa6.58□□□□□ -1.36
CD47-203ENST00000398258 HMX1Q9NP08 348 aaPredicted RBP6.58□□□□□ -1.36
CD47-203ENST00000398258 ATP5J2-PTCD1G3V325 749 aa6.57□□□□□ -1.36
CD47-203ENST00000398258 H7C1W4 665 aa6.57□□□□□ -1.36
CD47-203ENST00000398258 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
CD47-203ENST00000398258 NUCKS1Q9H1E3 243 aaKnown RBP6.57□□□□□ -1.36
CD47-203ENST00000398258 GPSM3Q9Y4H4 160 aa6.57□□□□□ -1.36
CD47-203ENST00000398258 GPC1P35052 558 aa6.56□□□□□ -1.36
CD47-203ENST00000398258 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
CD47-203ENST00000398258 MAP2K3P46734 347 aa6.55□□□□□ -1.36
CD47-203ENST00000398258 FZD5Q13467 585 aa6.55□□□□□ -1.36
CD47-203ENST00000398258 DOC2BQ14184 412 aa6.55□□□□□ -1.36
CD47-203ENST00000398258 DZIP3Q86Y13 1208 aaKnown RBP6.55□□□□□ -1.36
CD47-203ENST00000398258 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
CD47-203ENST00000398258 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
CD47-203ENST00000398258 PDE4DQ08499 809 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms