RNA–Protein interactions for RNA: ENST00000397779.2

TRNT1-204, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 5

Gene TRNT1, Length 374 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-204ENST00000397779 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 TOMM70O94826 608 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 PRELPP51888 382 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
TRNT1-204ENST00000397779 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
TRNT1-204ENST00000397779 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
TRNT1-204ENST00000397779 WDR90Q96KV7 1748 aa11.77□□□□□ -0.52
TRNT1-204ENST00000397779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRNT1-204ENST00000397779 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
TRNT1-204ENST00000397779 NMRK2Q9NPI5 230 aa11.77□□□□□ -0.53
TRNT1-204ENST00000397779 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
TRNT1-204ENST00000397779 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
TRNT1-204ENST00000397779 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
TRNT1-204ENST00000397779 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
TRNT1-204ENST00000397779 NME9Q86XW9 330 aa11.76□□□□□ -0.53
TRNT1-204ENST00000397779 LTN1O94822 1766 aa11.75□□□□□ -0.53
TRNT1-204ENST00000397779 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
TRNT1-204ENST00000397779 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
TRNT1-204ENST00000397779 USP47Q96K76 1375 aa11.75□□□□□ -0.53
TRNT1-204ENST00000397779 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
TRNT1-204ENST00000397779 C5P01031 1676 aa11.74□□□□□ -0.53
TRNT1-204ENST00000397779 PHF14O94880 888 aa11.73□□□□□ -0.53
TRNT1-204ENST00000397779 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
TRNT1-204ENST00000397779 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
TRNT1-204ENST00000397779 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
TRNT1-204ENST00000397779 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
TRNT1-204ENST00000397779 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
TRNT1-204ENST00000397779 USP54Q70EL1 1684 aa11.71□□□□□ -0.53
TRNT1-204ENST00000397779 MEGF6O75095 1541 aa11.71□□□□□ -0.53
TRNT1-204ENST00000397779 TOGARAM1Q9Y4F4 1720 aa11.71□□□□□ -0.54
TRNT1-204ENST00000397779 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
TRNT1-204ENST00000397779 IP6K1Q92551 441 aa11.7□□□□□ -0.54
TRNT1-204ENST00000397779 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
TRNT1-204ENST00000397779 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
TRNT1-204ENST00000397779 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
TRNT1-204ENST00000397779 PALLDQ8WX93 1383 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
TRNT1-204ENST00000397779 SLC34A2O95436 690 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 C16orf71Q8IYS4 520 aaPredicted RBP11.69□□□□□ -0.54
TRNT1-204ENST00000397779 AK7Q96M32 723 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 TAF1LQ8IZX4 1826 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
TRNT1-204ENST00000397779 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
TRNT1-204ENST00000397779 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
TRNT1-204ENST00000397779 FSTL1Q12841 308 aa11.68□□□□□ -0.54
TRNT1-204ENST00000397779 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
TRNT1-204ENST00000397779 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
TRNT1-204ENST00000397779 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 FBLN1P23142 703 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 RGPD2P0DJD1 1756 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 N4BP2Q86UW6 1770 aaPredicted RBP11.66□□□□□ -0.54
TRNT1-204ENST00000397779 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
TRNT1-204ENST00000397779 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
TRNT1-204ENST00000397779 MMP10P09238 476 aa11.65□□□□□ -0.54
TRNT1-204ENST00000397779 HOXC9P31274 260 aa11.65□□□□□ -0.54
TRNT1-204ENST00000397779 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
TRNT1-204ENST00000397779 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
TRNT1-204ENST00000397779 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
TRNT1-204ENST00000397779 SSFA2P28290 1259 aa11.64□□□□□ -0.55
TRNT1-204ENST00000397779 LINC00116Q8NCU8 138 aa11.64□□□□□ -0.55
TRNT1-204ENST00000397779 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
TRNT1-204ENST00000397779 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
TRNT1-204ENST00000397779 FCHSD2O94868 740 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 DPEP1P16444 411 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 AMPHP49418 695 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 TGFB2P61812 414 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 NBPF6Q5VWK0 638 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 NBPF4Q96M43 638 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
TRNT1-204ENST00000397779 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
TRNT1-204ENST00000397779 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
TRNT1-204ENST00000397779 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
TRNT1-204ENST00000397779 GNPATO15228 680 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
TRNT1-204ENST00000397779 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 RAPGEF4Q8WZA2 1011 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 PIGBQ92521 554 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
TRNT1-204ENST00000397779 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
TRNT1-204ENST00000397779 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 ROCK2O75116 1388 aaKnown RBP11.6□□□□□ -0.55
TRNT1-204ENST00000397779 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
TRNT1-204ENST00000397779 KCNA3P22001 575 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 RNF181Q9P0P0 153 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 CGNL1Q0VF96 1302 aa11.6□□□□□ -0.55
TRNT1-204ENST00000397779 LOC102724428A0A0B4J2F2 783 aa11.59□□□□□ -0.55
TRNT1-204ENST00000397779 CYP27B1O15528 508 aa11.59□□□□□ -0.55
TRNT1-204ENST00000397779 SIK1P57059 783 aa11.59□□□□□ -0.55
TRNT1-204ENST00000397779 ITPK1Q13572 414 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms