RNA–Protein interactions for RNA: ENST00000397779.2

TRNT1-204, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 5

Gene TRNT1, Length 374 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-204ENST00000397779 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
TRNT1-204ENST00000397779 ABCC9O60706 1549 aa19.72■□□□□ 0.75
TRNT1-204ENST00000397779 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
TRNT1-204ENST00000397779 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
TRNT1-204ENST00000397779 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
TRNT1-204ENST00000397779 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRNT1-204ENST00000397779 NACADO15069 1562 aa18.2■□□□□ 0.5
TRNT1-204ENST00000397779 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
TRNT1-204ENST00000397779 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
TRNT1-204ENST00000397779 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
TRNT1-204ENST00000397779 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
TRNT1-204ENST00000397779 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
TRNT1-204ENST00000397779 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
TRNT1-204ENST00000397779 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
TRNT1-204ENST00000397779 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
TRNT1-204ENST00000397779 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
TRNT1-204ENST00000397779 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
TRNT1-204ENST00000397779 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
TRNT1-204ENST00000397779 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
TRNT1-204ENST00000397779 CUX2O14529 1486 aa17.16■□□□□ 0.34
TRNT1-204ENST00000397779 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
TRNT1-204ENST00000397779 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
TRNT1-204ENST00000397779 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
TRNT1-204ENST00000397779 NESP48681 1621 aa16.81■□□□□ 0.28
TRNT1-204ENST00000397779 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
TRNT1-204ENST00000397779 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
TRNT1-204ENST00000397779 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TRNT1-204ENST00000397779 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
TRNT1-204ENST00000397779 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
TRNT1-204ENST00000397779 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
TRNT1-204ENST00000397779 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
TRNT1-204ENST00000397779 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
TRNT1-204ENST00000397779 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
TRNT1-204ENST00000397779 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
TRNT1-204ENST00000397779 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
TRNT1-204ENST00000397779 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
TRNT1-204ENST00000397779 WDR62O43379 1518 aa16.34■□□□□ 0.21
TRNT1-204ENST00000397779 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
TRNT1-204ENST00000397779 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
TRNT1-204ENST00000397779 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
TRNT1-204ENST00000397779 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
TRNT1-204ENST00000397779 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
TRNT1-204ENST00000397779 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
TRNT1-204ENST00000397779 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
TRNT1-204ENST00000397779 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
TRNT1-204ENST00000397779 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
TRNT1-204ENST00000397779 WIZO95785 1651 aa16.05■□□□□ 0.16
TRNT1-204ENST00000397779 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
TRNT1-204ENST00000397779 CFTRP13569 1480 aa16.01■□□□□ 0.15
TRNT1-204ENST00000397779 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
TRNT1-204ENST00000397779 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
TRNT1-204ENST00000397779 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
TRNT1-204ENST00000397779 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
TRNT1-204ENST00000397779 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
TRNT1-204ENST00000397779 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
TRNT1-204ENST00000397779 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
TRNT1-204ENST00000397779 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
TRNT1-204ENST00000397779 CHD1O14646 1710 aa15.78■□□□□ 0.12
TRNT1-204ENST00000397779 TOPBP1Q92547 1522 aa15.77■□□□□ 0.11
TRNT1-204ENST00000397779 FBLN2P98095 1184 aa15.75■□□□□ 0.11
TRNT1-204ENST00000397779 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.113e-9■■■■■ 37.1
TRNT1-204ENST00000397779 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
TRNT1-204ENST00000397779 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
TRNT1-204ENST00000397779 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
TRNT1-204ENST00000397779 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
TRNT1-204ENST00000397779 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
TRNT1-204ENST00000397779 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
TRNT1-204ENST00000397779 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
TRNT1-204ENST00000397779 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
TRNT1-204ENST00000397779 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
TRNT1-204ENST00000397779 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
TRNT1-204ENST00000397779 SNAPC4Q5SXM2 1469 aa15.56■□□□□ 0.08
TRNT1-204ENST00000397779 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
TRNT1-204ENST00000397779 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
TRNT1-204ENST00000397779 SOGA1O94964 1423 aa15.5■□□□□ 0.07
TRNT1-204ENST00000397779 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
TRNT1-204ENST00000397779 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
TRNT1-204ENST00000397779 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
TRNT1-204ENST00000397779 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
TRNT1-204ENST00000397779 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
TRNT1-204ENST00000397779 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
TRNT1-204ENST00000397779 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
TRNT1-204ENST00000397779 CUX1P39880 1505 aa15.32■□□□□ 0.04
TRNT1-204ENST00000397779 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
TRNT1-204ENST00000397779 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
TRNT1-204ENST00000397779 KIF13AQ9H1H9 1805 aa15.25■□□□□ 0.03
TRNT1-204ENST00000397779 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
TRNT1-204ENST00000397779 KDM4FA0A1W2PPD8 638 aa15.22■□□□□ 0.03
TRNT1-204ENST00000397779 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
TRNT1-204ENST00000397779 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.02
TRNT1-204ENST00000397779 NUP160Q12769 1436 aa15.19■□□□□ 0.02
TRNT1-204ENST00000397779 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
TRNT1-204ENST00000397779 FAM69CQ0P6D2 419 aa15.16■□□□□ 0.02
TRNT1-204ENST00000397779 SHROOM2Q13796 1616 aa15.16■□□□□ 0.02
TRNT1-204ENST00000397779 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
TRNT1-204ENST00000397779 ABCC10Q5T3U5 1492 aa15.12■□□□□ 0.01
TRNT1-204ENST00000397779 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
TRNT1-204ENST00000397779 DIP2BQ9P265 1576 aa15.07■□□□□ 0
TRNT1-204ENST00000397779 KDM6BO15054 1643 aa15.07■□□□□ 0
TRNT1-204ENST00000397779 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms