RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
MKL1-202ENST00000396617 NUCB1Q02818 461 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
MKL1-202ENST00000396617 MBD3O95983 291 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 MYL6BP14649 208 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 MX1P20591 662 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 VAMP4O75379 141 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 BRPF3Q9ULD4 1205 aa17.18■□□□□ 0.34
MKL1-202ENST00000396617 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
MKL1-202ENST00000396617 CAVIN1Q6NZI2 390 aaKnown RBP17.17■□□□□ 0.34
MKL1-202ENST00000396617 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
MKL1-202ENST00000396617 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
MKL1-202ENST00000396617 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
MKL1-202ENST00000396617 SIL1Q9H173 461 aa17.17■□□□□ 0.34
MKL1-202ENST00000396617 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
MKL1-202ENST00000396617 APPP05067 770 aa17.16■□□□□ 0.34
MKL1-202ENST00000396617 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
MKL1-202ENST00000396617 CPLX1O14810 134 aa17.16■□□□□ 0.34
MKL1-202ENST00000396617 TRDNQ13061 729 aa17.16■□□□□ 0.34
MKL1-202ENST00000396617 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
MKL1-202ENST00000396617 NASPP49321 788 aaPredicted RBP17.15■□□□□ 0.34
MKL1-202ENST00000396617 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
MKL1-202ENST00000396617 NCKAP5LQ9HCH0 1330 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
MKL1-202ENST00000396617 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
MKL1-202ENST00000396617 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
MKL1-202ENST00000396617 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
MKL1-202ENST00000396617 AACSQ86V21 672 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 MYOM2P54296 1465 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 MPRIPQ6WCQ1 1025 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
MKL1-202ENST00000396617 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
MKL1-202ENST00000396617 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
MKL1-202ENST00000396617 PDCP20941 246 aa17.12■□□□□ 0.33
MKL1-202ENST00000396617 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
MKL1-202ENST00000396617 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
MKL1-202ENST00000396617 BECN2A8MW95 431 aa17.12■□□□□ 0.33
MKL1-202ENST00000396617 MEIS3Q99687 375 aa17.12■□□□□ 0.33
MKL1-202ENST00000396617 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
MKL1-202ENST00000396617 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
MKL1-202ENST00000396617 MLH3Q9UHC1 1453 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
MKL1-202ENST00000396617 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
MKL1-202ENST00000396617 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
MKL1-202ENST00000396617 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 FLT4P35916 1363 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 SYNMO15061 1565 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
MKL1-202ENST00000396617 WDR33Q9C0J8 1336 aaKnown RBP17.1■□□□□ 0.33
MKL1-202ENST00000396617 ZFYVE16Q7Z3T8 1539 aa17.1■□□□□ 0.33
MKL1-202ENST00000396617 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
MKL1-202ENST00000396617 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
MKL1-202ENST00000396617 YEATS2Q9ULM3 1422 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 IL13P35225 146 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
MKL1-202ENST00000396617 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
MKL1-202ENST00000396617 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.33
MKL1-202ENST00000396617 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.33
MKL1-202ENST00000396617 RNF214Q8ND24 703 aa17.08■□□□□ 0.33
MKL1-202ENST00000396617 IL27Q8NEV9 243 aa17.08■□□□□ 0.33
MKL1-202ENST00000396617 CROCC2H7BZ55 1655 aa17.08■□□□□ 0.33
MKL1-202ENST00000396617 TRIM29Q14134 588 aa17.08■□□□□ 0.32
MKL1-202ENST00000396617 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.32
MKL1-202ENST00000396617 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
MKL1-202ENST00000396617 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
MKL1-202ENST00000396617 FIBPO43427 364 aa17.07■□□□□ 0.32
MKL1-202ENST00000396617 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
MKL1-202ENST00000396617 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
MKL1-202ENST00000396617 ANKRD1Q15327 319 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 KRT24Q2M2I5 525 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 TRMT2AQ8IZ69 625 aaKnown RBP17.06■□□□□ 0.32
MKL1-202ENST00000396617 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 UNC13BO14795 1591 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 FOSBP53539 338 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 BLOC1S2Q6QNY1 142 aa17.06■□□□□ 0.32
MKL1-202ENST00000396617 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms