RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
SNX6-202ENST00000396526 FOXO3O43524 673 aa20.38■□□□□ 0.85
SNX6-202ENST00000396526 PEAK1Q9H792 1746 aa20.38■□□□□ 0.85
SNX6-202ENST00000396526 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
SNX6-202ENST00000396526 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
SNX6-202ENST00000396526 ATF3P18847 181 aa20.37■□□□□ 0.85
SNX6-202ENST00000396526 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
SNX6-202ENST00000396526 DLG5Q8TDM6 1919 aa20.35■□□□□ 0.85
SNX6-202ENST00000396526 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SNX6-202ENST00000396526 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
SNX6-202ENST00000396526 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
SNX6-202ENST00000396526 ZBTB7BO15156 539 aaPredicted RBP20.33■□□□□ 0.84
SNX6-202ENST00000396526 SMC5Q8IY18 1101 aa20.33■□□□□ 0.84
SNX6-202ENST00000396526 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.84
SNX6-202ENST00000396526 ABCC4O15439 1325 aa20.33■□□□□ 0.84
SNX6-202ENST00000396526 PTPRCP08575 1304 aa20.33■□□□□ 0.84
SNX6-202ENST00000396526 RGPD1P0DJD0 1748 aa20.32■□□□□ 0.84
SNX6-202ENST00000396526 KRT28Q7Z3Y7 464 aa20.32■□□□□ 0.84
SNX6-202ENST00000396526 GCC1Q96CN9 775 aa20.31■□□□□ 0.84
SNX6-202ENST00000396526 GCP02774 474 aa20.31■□□□□ 0.84
SNX6-202ENST00000396526 CRB1P82279 1406 aa20.3■□□□□ 0.84
SNX6-202ENST00000396526 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
SNX6-202ENST00000396526 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
SNX6-202ENST00000396526 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
SNX6-202ENST00000396526 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
SNX6-202ENST00000396526 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
SNX6-202ENST00000396526 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
SNX6-202ENST00000396526 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
SNX6-202ENST00000396526 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
SNX6-202ENST00000396526 CCDC30Q5VVM6 783 aa20.28■□□□□ 0.84
SNX6-202ENST00000396526 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
SNX6-202ENST00000396526 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
SNX6-202ENST00000396526 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
SNX6-202ENST00000396526 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
SNX6-202ENST00000396526 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
SNX6-202ENST00000396526 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
SNX6-202ENST00000396526 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
SNX6-202ENST00000396526 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
SNX6-202ENST00000396526 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
SNX6-202ENST00000396526 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
SNX6-202ENST00000396526 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
SNX6-202ENST00000396526 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
SNX6-202ENST00000396526 NUCB1Q02818 461 aa20.24■□□□□ 0.83
SNX6-202ENST00000396526 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
SNX6-202ENST00000396526 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
SNX6-202ENST00000396526 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
SNX6-202ENST00000396526 TMEM94Q12767 1356 aa20.22■□□□□ 0.83
SNX6-202ENST00000396526 CCT4P50991 539 aaKnown RBP20.22■□□□□ 0.83
SNX6-202ENST00000396526 TEFQ10587 303 aa20.22■□□□□ 0.83
SNX6-202ENST00000396526 RPAP2Q8IXW5 612 aaPredicted RBP20.22■□□□□ 0.83
SNX6-202ENST00000396526 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
SNX6-202ENST00000396526 C1orf115Q9H7X2 142 aa20.21■□□□□ 0.83
SNX6-202ENST00000396526 LNPKQ9C0E8 428 aa20.21■□□□□ 0.83
SNX6-202ENST00000396526 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
SNX6-202ENST00000396526 ANKRD24Q8TF21 1146 aa20.21■□□□□ 0.83
SNX6-202ENST00000396526 NPHP3Q7Z494 1330 aa20.2■□□□□ 0.82
SNX6-202ENST00000396526 BECN1Q14457 450 aa20.2■□□□□ 0.82
SNX6-202ENST00000396526 AKAP4Q5JQC9 854 aa20.2■□□□□ 0.82
SNX6-202ENST00000396526 NFAT5O94916 1531 aa20.2■□□□□ 0.82
SNX6-202ENST00000396526 HMMRO75330 724 aa20.2■□□□□ 0.82
SNX6-202ENST00000396526 USP19O94966 1318 aa20.19■□□□□ 0.82
SNX6-202ENST00000396526 DCCP43146 1447 aa20.19■□□□□ 0.82
SNX6-202ENST00000396526 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
SNX6-202ENST00000396526 MSH6P52701 1360 aa20.18■□□□□ 0.82
SNX6-202ENST00000396526 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
SNX6-202ENST00000396526 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
SNX6-202ENST00000396526 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
SNX6-202ENST00000396526 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
SNX6-202ENST00000396526 KIF1AQ12756 1690 aa20.17■□□□□ 0.82
SNX6-202ENST00000396526 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
SNX6-202ENST00000396526 HDGFL1Q5TGJ6 251 aa20.15■□□□□ 0.82
SNX6-202ENST00000396526 ANKRD44Q8N8A2 993 aa20.15■□□□□ 0.82
SNX6-202ENST00000396526 LTN1O94822 1766 aa20.15■□□□□ 0.82
SNX6-202ENST00000396526 ZC3H6P61129 1189 aaKnown RBP20.15■□□□□ 0.82
SNX6-202ENST00000396526 FLIIQ13045 1269 aa20.15■□□□□ 0.82
SNX6-202ENST00000396526 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
SNX6-202ENST00000396526 HOXB7P09629 217 aa20.14■□□□□ 0.82
SNX6-202ENST00000396526 HSPA2P54652 639 aa20.14■□□□□ 0.82
SNX6-202ENST00000396526 GNAI3P08754 354 aa20.14■□□□□ 0.81
SNX6-202ENST00000396526 SLIT3O75094 1523 aa20.14■□□□□ 0.81
SNX6-202ENST00000396526 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
SNX6-202ENST00000396526 MST1RQ04912 1400 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 CEMIPQ8WUJ3 1361 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 G2E3Q7L622 706 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
SNX6-202ENST00000396526 SIRT2Q8IXJ6 389 aa20.11■□□□□ 0.81
SNX6-202ENST00000396526 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
SNX6-202ENST00000396526 GNAI2P04899 355 aa20.11■□□□□ 0.81
SNX6-202ENST00000396526 NBR1Q14596 966 aa20.11■□□□□ 0.81
SNX6-202ENST00000396526 F6X3S4 739 aa20.1■□□□□ 0.81
SNX6-202ENST00000396526 SEC24BO95487 1268 aa20.1■□□□□ 0.81
SNX6-202ENST00000396526 MEIS3Q99687 375 aa20.1■□□□□ 0.81
SNX6-202ENST00000396526 LGR6Q9HBX8 967 aa20.1■□□□□ 0.81
SNX6-202ENST00000396526 MPRIPQ6WCQ1 1025 aa20.1■□□□□ 0.81
SNX6-202ENST00000396526 PHRF1Q9P1Y6 1649 aaKnown RBP20.1■□□□□ 0.81
SNX6-202ENST00000396526 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
SNX6-202ENST00000396526 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms