RNA–Protein interactions for RNA: ENST00000396505.6

DKK3-202, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DKK3, Length 2,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-202ENST00000396505 G2E3Q7L622 706 aa23.5■■□□□ 1.35
DKK3-202ENST00000396505 CEP170BQ9Y4F5 1589 aaPredicted RBP23.49■■□□□ 1.35
DKK3-202ENST00000396505 PTCH1Q13635 1447 aa23.49■■□□□ 1.35
DKK3-202ENST00000396505 TTC21AQ8NDW8 1320 aa23.49■■□□□ 1.35
DKK3-202ENST00000396505 FLT4P35916 1363 aa23.49■■□□□ 1.35
DKK3-202ENST00000396505 BRPF1P55201 1214 aaPredicted RBP23.49■■□□□ 1.35
DKK3-202ENST00000396505 LMOD2Q6P5Q4 547 aa23.49■■□□□ 1.35
DKK3-202ENST00000396505 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
DKK3-202ENST00000396505 TBC1D2Q9BYX2 928 aa23.48■■□□□ 1.35
DKK3-202ENST00000396505 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
DKK3-202ENST00000396505 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
DKK3-202ENST00000396505 C22orf23Q9BZE7 217 aa23.47■■□□□ 1.35
DKK3-202ENST00000396505 HOXC9P31274 260 aa23.47■■□□□ 1.35
DKK3-202ENST00000396505 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
DKK3-202ENST00000396505 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
DKK3-202ENST00000396505 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
DKK3-202ENST00000396505 MEIS3Q99687 375 aa23.45■■□□□ 1.34
DKK3-202ENST00000396505 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
DKK3-202ENST00000396505 BECN1Q14457 450 aa23.44■■□□□ 1.34
DKK3-202ENST00000396505 ANKLE2Q86XL3 938 aa23.44■■□□□ 1.34
DKK3-202ENST00000396505 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
DKK3-202ENST00000396505 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
DKK3-202ENST00000396505 MSH6P52701 1360 aa23.43■■□□□ 1.34
DKK3-202ENST00000396505 CRB1P82279 1406 aa23.43■■□□□ 1.34
DKK3-202ENST00000396505 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
DKK3-202ENST00000396505 IL27Q8NEV9 243 aa23.42■■□□□ 1.34
DKK3-202ENST00000396505 OTUD7AQ8TE49 926 aaPredicted RBP23.42■■□□□ 1.34
DKK3-202ENST00000396505 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
DKK3-202ENST00000396505 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
DKK3-202ENST00000396505 PSME1Q06323 249 aa23.41■■□□□ 1.34
DKK3-202ENST00000396505 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
DKK3-202ENST00000396505 GSE1Q14687 1217 aa23.39■■□□□ 1.34
DKK3-202ENST00000396505 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
DKK3-202ENST00000396505 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
DKK3-202ENST00000396505 ANTXR1Q9H6X2 564 aa23.38■■□□□ 1.33
DKK3-202ENST00000396505 RGS12O14924 1447 aa23.38■■□□□ 1.33
DKK3-202ENST00000396505 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
DKK3-202ENST00000396505 FMN2Q9NZ56 1722 aa23.37■■□□□ 1.33
DKK3-202ENST00000396505 IL17REQ8NFR9 667 aa23.37■■□□□ 1.33
DKK3-202ENST00000396505 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
DKK3-202ENST00000396505 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
DKK3-202ENST00000396505 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
DKK3-202ENST00000396505 RTN4Q9NQC3 1192 aaKnown RBP23.36■■□□□ 1.33
DKK3-202ENST00000396505 INTS3Q68E01 1043 aaKnown RBP23.36■■□□□ 1.33
DKK3-202ENST00000396505 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
DKK3-202ENST00000396505 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
DKK3-202ENST00000396505 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
DKK3-202ENST00000396505 KDRP35968 1356 aa23.34■■□□□ 1.33
DKK3-202ENST00000396505 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
DKK3-202ENST00000396505 CEP85Q6P2H3 762 aa23.34■■□□□ 1.33
DKK3-202ENST00000396505 TBC1D9Q6ZT07 1266 aa23.33■■□□□ 1.33
DKK3-202ENST00000396505 FOXD4L1Q9NU39 408 aa23.33■■□□□ 1.33
DKK3-202ENST00000396505 BRPF3Q9ULD4 1205 aa23.33■■□□□ 1.33
DKK3-202ENST00000396505 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
DKK3-202ENST00000396505 EIF2S2P20042 333 aaKnown RBP23.32■■□□□ 1.32
DKK3-202ENST00000396505 LGR6Q9HBX8 967 aa23.32■■□□□ 1.32
DKK3-202ENST00000396505 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
DKK3-202ENST00000396505 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
DKK3-202ENST00000396505 TSHZ3Q63HK5 1081 aa23.31■■□□□ 1.32
DKK3-202ENST00000396505 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
DKK3-202ENST00000396505 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
DKK3-202ENST00000396505 PLEKHM2Q8IWE5 1019 aa23.3■■□□□ 1.32
DKK3-202ENST00000396505 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
DKK3-202ENST00000396505 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
DKK3-202ENST00000396505 DDX17Q92841 729 aaKnown RBP23.29■■□□□ 1.32
DKK3-202ENST00000396505 DCTPP1Q9H773 170 aa23.29■■□□□ 1.32
DKK3-202ENST00000396505 ANXA1P04083 346 aa23.29■■□□□ 1.32
DKK3-202ENST00000396505 ANKARQ7Z5J8 1434 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 ATP10DQ9P241 1426 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 KCNQ3O43525 872 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 EXOC6BQ9Y2D4 811 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 FLIIQ13045 1269 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 PTPRCP08575 1304 aa23.28■■□□□ 1.32
DKK3-202ENST00000396505 ARXQ96QS3 562 aa23.27■■□□□ 1.32
DKK3-202ENST00000396505 PHAXQ9H814 394 aaKnown RBP23.27■■□□□ 1.32
DKK3-202ENST00000396505 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
DKK3-202ENST00000396505 MPRIPQ6WCQ1 1025 aa23.27■■□□□ 1.32
DKK3-202ENST00000396505 CD2BP2O95400 341 aaKnown RBP23.26■■□□□ 1.31
DKK3-202ENST00000396505 MARF1Q9Y4F3 1742 aaKnown RBP23.26■■□□□ 1.31
DKK3-202ENST00000396505 MAP3K5Q99683 1374 aa23.26■■□□□ 1.31
DKK3-202ENST00000396505 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
DKK3-202ENST00000396505 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
DKK3-202ENST00000396505 NWD1Q149M9 1564 aa23.24■■□□□ 1.31
DKK3-202ENST00000396505 IP6K1Q92551 441 aa23.24■■□□□ 1.31
DKK3-202ENST00000396505 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
DKK3-202ENST00000396505 KIF2CQ99661 725 aa23.23■■□□□ 1.31
DKK3-202ENST00000396505 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
DKK3-202ENST00000396505 CCDC30Q5VVM6 783 aa23.22■■□□□ 1.31
DKK3-202ENST00000396505 PROSER2Q86WR7 435 aaPredicted RBP23.22■■□□□ 1.31
DKK3-202ENST00000396505 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
DKK3-202ENST00000396505 PNMA6EA0A0J9YXQ4 647 aa23.21■■□□□ 1.31
DKK3-202ENST00000396505 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
DKK3-202ENST00000396505 LTN1O94822 1766 aa23.21■■□□□ 1.31
DKK3-202ENST00000396505 GCP02774 474 aa23.21■■□□□ 1.31
DKK3-202ENST00000396505 ZNF530Q6P9A1 599 aaPredicted RBP23.21■■□□□ 1.31
DKK3-202ENST00000396505 TTC22Q5TAA0 569 aa23.2■■□□□ 1.3
DKK3-202ENST00000396505 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
DKK3-202ENST00000396505 CDC45O75419 566 aa23.19■■□□□ 1.3
DKK3-202ENST00000396505 RGPD2P0DJD1 1756 aa23.19■■□□□ 1.3
DKK3-202ENST00000396505 LRRFIP2Q9Y608 721 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms