RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TMX3Q96JJ7 454 aa22.18■■□□□ 1.14
HERPUD2-202ENST00000396081 CHD1O14646 1710 aa22.18■■□□□ 1.14
HERPUD2-202ENST00000396081 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
HERPUD2-202ENST00000396081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.18■■□□□ 1.14
HERPUD2-202ENST00000396081 INO80Q9ULG1 1556 aaPredicted RBP22.17■■□□□ 1.14
HERPUD2-202ENST00000396081 MTERF4Q7Z6M4 381 aaKnown RBP22.17■■□□□ 1.14
HERPUD2-202ENST00000396081 ANKRD44Q8N8A2 993 aa22.17■■□□□ 1.14
HERPUD2-202ENST00000396081 GLI2P10070 1586 aa22.17■■□□□ 1.14
HERPUD2-202ENST00000396081 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
HERPUD2-202ENST00000396081 TSHZ3Q63HK5 1081 aa22.16■■□□□ 1.14
HERPUD2-202ENST00000396081 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
HERPUD2-202ENST00000396081 CDK19Q9BWU1 502 aa22.15■■□□□ 1.14
HERPUD2-202ENST00000396081 PLCB2Q00722 1185 aa22.15■■□□□ 1.14
HERPUD2-202ENST00000396081 ZHX1Q9UKY1 873 aaPredicted RBP22.15■■□□□ 1.14
HERPUD2-202ENST00000396081 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
HERPUD2-202ENST00000396081 CEP85Q6P2H3 762 aa22.15■■□□□ 1.14
HERPUD2-202ENST00000396081 PNPLA6Q8IY17 1366 aa22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 SYAP1Q96A49 352 aaPredicted RBP22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 MEIS3Q99687 375 aa22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 C17orf53Q8N3J3 647 aaPredicted RBP22.13■■□□□ 1.13
HERPUD2-202ENST00000396081 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
HERPUD2-202ENST00000396081 ZNF853P0CG23 659 aa22.12■■□□□ 1.13
HERPUD2-202ENST00000396081 USP25Q9UHP3 1055 aa22.12■■□□□ 1.13
HERPUD2-202ENST00000396081 PPLO60437 1756 aa22.11■■□□□ 1.13
HERPUD2-202ENST00000396081 SLC4A10Q6U841 1118 aa22.11■■□□□ 1.13
HERPUD2-202ENST00000396081 GADD45BO75293 160 aaPredicted RBP22.11■■□□□ 1.13
HERPUD2-202ENST00000396081 UPF3BQ9BZI7 483 aaKnown RBP22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 ANO2Q9NQ90 1003 aa22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 IDI1Q13907 227 aa22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 TTC12Q9H892 705 aaPredicted RBP22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 BRD1O95696 1058 aa22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 SMAP1Q8IYB5 467 aaPredicted RBP22.1■■□□□ 1.13
HERPUD2-202ENST00000396081 RILPL2Q969X0 211 aa22.09■■□□□ 1.13
HERPUD2-202ENST00000396081 TRIM6-TRIM34B2RNG4 842 aa22.08■■□□□ 1.13
HERPUD2-202ENST00000396081 ZRANB1Q9UGI0 708 aa22.08■■□□□ 1.13
HERPUD2-202ENST00000396081 PALD1Q9ULE6 856 aa22.08■■□□□ 1.13
HERPUD2-202ENST00000396081 MCCP23508 829 aa22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 CCDC94Q9BW85 323 aaPredicted RBP22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 MYRIPQ8NFW9 859 aa22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 EXOC6BQ9Y2D4 811 aa22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
HERPUD2-202ENST00000396081 PHF14O94880 888 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 PDE1AP54750 535 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 MSH6P52701 1360 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 CBX1P83916 185 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 USP48Q86UV5 1035 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
HERPUD2-202ENST00000396081 NOLC1Q14978 699 aaKnown RBP eCLIP22.05■■□□□ 1.12
HERPUD2-202ENST00000396081 ZFYVE9O95405 1425 aa22.05■■□□□ 1.12
HERPUD2-202ENST00000396081 HMMRO75330 724 aa22.05■■□□□ 1.12
HERPUD2-202ENST00000396081 IL13P35225 146 aa22.05■■□□□ 1.12
HERPUD2-202ENST00000396081 NME9Q86XW9 330 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 ADCY5O95622 1261 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 MCM2P49736 904 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 ATP10DQ9P241 1426 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 UHRF1BP1LA0JNW5 1464 aa22.04■■□□□ 1.12
HERPUD2-202ENST00000396081 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
HERPUD2-202ENST00000396081 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
HERPUD2-202ENST00000396081 A0A0U1RQG5 324 aaPredicted RBP22.03■■□□□ 1.12
HERPUD2-202ENST00000396081 F6X3S4 739 aa22.03■■□□□ 1.12
HERPUD2-202ENST00000396081 SLC4A2P04920 1241 aa22.02■■□□□ 1.12
HERPUD2-202ENST00000396081 MCM10Q7L590 875 aa22.02■■□□□ 1.12
HERPUD2-202ENST00000396081 ESYT1Q9BSJ8 1104 aa22.02■■□□□ 1.12
HERPUD2-202ENST00000396081 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
HERPUD2-202ENST00000396081 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
HERPUD2-202ENST00000396081 YTHDC2Q9H6S0 1430 aaKnown RBP22.01■■□□□ 1.11
HERPUD2-202ENST00000396081 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
HERPUD2-202ENST00000396081 WAPLQ7Z5K2 1190 aa22.01■■□□□ 1.11
HERPUD2-202ENST00000396081 PIBF1Q8WXW3 757 aa22.01■■□□□ 1.11
HERPUD2-202ENST00000396081 HMGN5P82970 282 aaKnown RBP22■■□□□ 1.11
HERPUD2-202ENST00000396081 MIS18AQ9NYP9 233 aa22■■□□□ 1.11
HERPUD2-202ENST00000396081 CUL4AQ13619 759 aa22■■□□□ 1.11
HERPUD2-202ENST00000396081 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
HERPUD2-202ENST00000396081 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
HERPUD2-202ENST00000396081 PRIMPOLQ96LW4 560 aa21.99■■□□□ 1.11
HERPUD2-202ENST00000396081 KIDINS220Q9ULH0 1771 aa21.99■■□□□ 1.11
HERPUD2-202ENST00000396081 PPP4R3BQ5MIZ7 849 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 ZNF710Q8N1W2 664 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 CNPY2Q9Y2B0 182 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 WDR33Q9C0J8 1336 aaKnown RBP21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 DTNBO60941 627 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 FAM184AQ8NB25 1140 aa21.98■■□□□ 1.11
HERPUD2-202ENST00000396081 ABCC3O15438 1527 aa21.97■■□□□ 1.11
HERPUD2-202ENST00000396081 ABCA9Q8IUA7 1624 aa21.97■■□□□ 1.11
HERPUD2-202ENST00000396081 FIBPO43427 364 aa21.96■■□□□ 1.11
HERPUD2-202ENST00000396081 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
HERPUD2-202ENST00000396081 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
HERPUD2-202ENST00000396081 INTS4Q96HW7 963 aaKnown RBP21.96■■□□□ 1.11
HERPUD2-202ENST00000396081 CCDC183Q5T5S1 534 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms