RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CRB1P82279 1406 aa15.45■□□□□ 0.06
ITGB1-202ENST00000396033 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
ITGB1-202ENST00000396033 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
ITGB1-202ENST00000396033 HSPA2P54652 639 aa15.44■□□□□ 0.06
ITGB1-202ENST00000396033 NBR1Q14596 966 aa15.44■□□□□ 0.06
ITGB1-202ENST00000396033 ATF3P18847 181 aa15.44■□□□□ 0.06
ITGB1-202ENST00000396033 ARHGAP45Q92619 1136 aa15.44■□□□□ 0.06
ITGB1-202ENST00000396033 STRCP1A6NGW2 1772 aa15.43■□□□□ 0.06
ITGB1-202ENST00000396033 USHBP1Q8N6Y0 703 aa15.43■□□□□ 0.06
ITGB1-202ENST00000396033 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
ITGB1-202ENST00000396033 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
ITGB1-202ENST00000396033 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
ITGB1-202ENST00000396033 SLIT3O75094 1523 aa15.42■□□□□ 0.06
ITGB1-202ENST00000396033 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
ITGB1-202ENST00000396033 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
ITGB1-202ENST00000396033 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
ITGB1-202ENST00000396033 KIAA0232Q92628 1395 aa15.42■□□□□ 0.06
ITGB1-202ENST00000396033 PHRF1Q9P1Y6 1649 aaKnown RBP15.41■□□□□ 0.06
ITGB1-202ENST00000396033 GCP02774 474 aa15.41■□□□□ 0.06
ITGB1-202ENST00000396033 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
ITGB1-202ENST00000396033 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
ITGB1-202ENST00000396033 MST1RQ04912 1400 aa15.41■□□□□ 0.06
ITGB1-202ENST00000396033 DCCP43146 1447 aa15.41■□□□□ 0.06
ITGB1-202ENST00000396033 GNAT3A8MTJ3 354 aa15.4■□□□□ 0.06
ITGB1-202ENST00000396033 HTATSF1O43719 755 aaKnown RBP15.4■□□□□ 0.06
ITGB1-202ENST00000396033 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
ITGB1-202ENST00000396033 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
ITGB1-202ENST00000396033 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
ITGB1-202ENST00000396033 LRRC37A3O60309 1634 aa15.4■□□□□ 0.06
ITGB1-202ENST00000396033 API5Q9BZZ5 524 aaKnown RBP15.39■□□□□ 0.05
ITGB1-202ENST00000396033 ABCC4O15439 1325 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 USP19O94966 1318 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 NBPF6Q5VWK0 638 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 NBPF4Q96M43 638 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
ITGB1-202ENST00000396033 HDAC1Q13547 482 aaPredicted RBP15.38■□□□□ 0.05
ITGB1-202ENST00000396033 ARHGEF25Q86VW2 580 aa15.38■□□□□ 0.05
ITGB1-202ENST00000396033 MSH6P52701 1360 aa15.38■□□□□ 0.05
ITGB1-202ENST00000396033 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
ITGB1-202ENST00000396033 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
ITGB1-202ENST00000396033 CHMP4BQ9H444 224 aaKnown RBP15.38■□□□□ 0.05
ITGB1-202ENST00000396033 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
ITGB1-202ENST00000396033 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
ITGB1-202ENST00000396033 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
ITGB1-202ENST00000396033 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
ITGB1-202ENST00000396033 ALS2Q96Q42 1657 aa15.36■□□□□ 0.05
ITGB1-202ENST00000396033 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
ITGB1-202ENST00000396033 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
ITGB1-202ENST00000396033 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
ITGB1-202ENST00000396033 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
ITGB1-202ENST00000396033 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
ITGB1-202ENST00000396033 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
ITGB1-202ENST00000396033 KDM4FA0A1W2PPD8 638 aa15.33■□□□□ 0.04
ITGB1-202ENST00000396033 C1orf115Q9H7X2 142 aa15.33■□□□□ 0.04
ITGB1-202ENST00000396033 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.04
ITGB1-202ENST00000396033 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
ITGB1-202ENST00000396033 PTPRCP08575 1304 aa15.32■□□□□ 0.04
ITGB1-202ENST00000396033 RGS12O14924 1447 aa15.32■□□□□ 0.04
ITGB1-202ENST00000396033 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
ITGB1-202ENST00000396033 ZC3H6P61129 1189 aaKnown RBP15.32■□□□□ 0.04
ITGB1-202ENST00000396033 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
ITGB1-202ENST00000396033 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
ITGB1-202ENST00000396033 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
ITGB1-202ENST00000396033 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
ITGB1-202ENST00000396033 NCAPD2Q15021 1401 aa15.31■□□□□ 0.04
ITGB1-202ENST00000396033 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
ITGB1-202ENST00000396033 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
ITGB1-202ENST00000396033 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
ITGB1-202ENST00000396033 STRCQ7RTU9 1775 aa15.3■□□□□ 0.04
ITGB1-202ENST00000396033 TNS3Q68CZ2 1445 aa15.3■□□□□ 0.04
ITGB1-202ENST00000396033 INTS3Q68E01 1043 aaKnown RBP15.3■□□□□ 0.04
ITGB1-202ENST00000396033 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
ITGB1-202ENST00000396033 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
ITGB1-202ENST00000396033 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
ITGB1-202ENST00000396033 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
ITGB1-202ENST00000396033 CAMTA1Q9Y6Y1 1673 aa15.29■□□□□ 0.04
ITGB1-202ENST00000396033 AMOTQ4VCS5 1084 aa15.29■□□□□ 0.04
ITGB1-202ENST00000396033 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
ITGB1-202ENST00000396033 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
ITGB1-202ENST00000396033 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
ITGB1-202ENST00000396033 ERBB3P21860 1342 aa15.28■□□□□ 0.04
ITGB1-202ENST00000396033 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
ITGB1-202ENST00000396033 PXDNQ92626 1479 aa15.28■□□□□ 0.04
ITGB1-202ENST00000396033 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
ITGB1-202ENST00000396033 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
ITGB1-202ENST00000396033 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.03
ITGB1-202ENST00000396033 G2E3Q7L622 706 aa15.27■□□□□ 0.03
ITGB1-202ENST00000396033 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.03
ITGB1-202ENST00000396033 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.03
ITGB1-202ENST00000396033 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
ITGB1-202ENST00000396033 NUCB1Q02818 461 aa15.26■□□□□ 0.03
ITGB1-202ENST00000396033 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
ITGB1-202ENST00000396033 GCC1Q96CN9 775 aa15.26■□□□□ 0.03
ITGB1-202ENST00000396033 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
ITGB1-202ENST00000396033 TEFQ10587 303 aa15.25■□□□□ 0.03
ITGB1-202ENST00000396033 MPRIPQ6WCQ1 1025 aa15.25■□□□□ 0.03
ITGB1-202ENST00000396033 DDRGK1Q96HY6 314 aa15.25■□□□□ 0.03
ITGB1-202ENST00000396033 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
ITGB1-202ENST00000396033 SIRT2Q8IXJ6 389 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms