RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PPP1R26Q5T8A7 1209 aaPredicted RBP5.15□□□□□ -1.58
XRCC4-203ENST00000396027 LYSMD3Q7Z3D4 306 aa5.15□□□□□ -1.58
XRCC4-203ENST00000396027 NUTM1Q86Y26 1132 aa5.15□□□□□ -1.58
XRCC4-203ENST00000396027 PRR7Q8TB68 274 aa5.15□□□□□ -1.58
XRCC4-203ENST00000396027 EDARADDQ8WWZ3 215 aa5.15□□□□□ -1.58
XRCC4-203ENST00000396027 COL17A1Q9UMD9 1497 aaPredicted RBP5.15□□□□□ -1.59
XRCC4-203ENST00000396027 HYAL3O43820 417 aaPredicted RBP5.14□□□□□ -1.59
XRCC4-203ENST00000396027 AMPD1P23109 780 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 RELBQ01201 579 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 NEUROD1Q13562 356 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 DBN1Q16643 649 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 PRSS36Q5K4E3 855 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 GTPBP3Q969Y2 492 aaKnown RBP5.13□□□□□ -1.59
XRCC4-203ENST00000396027 PKNOX2Q96KN3 472 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 DHX9Q08211 1270 aaKnown RBP5.13□□□□□ -1.59
XRCC4-203ENST00000396027 GOLGA6L1Q8N7Z2 621 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 PCDHGC3Q9UN70 934 aa5.13□□□□□ -1.59
XRCC4-203ENST00000396027 TESPA1A2RU30 521 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-203ENST00000396027 SEMA3EO15041 775 aa5.12□□□□□ -1.59
XRCC4-203ENST00000396027 HOXB4P17483 251 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-203ENST00000396027 LYPD8Q6UX82 237 aa5.12□□□□□ -1.59
XRCC4-203ENST00000396027 RIPOR1Q6ZS17 1223 aa5.12□□□□□ -1.59
XRCC4-203ENST00000396027 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-203ENST00000396027 AGBL1Q96MI9 1066 aa5.12□□□□□ -1.59
XRCC4-203ENST00000396027 CDK11AQ9UQ88 783 aaPredicted RBP5.12□□□□□ -1.59
XRCC4-203ENST00000396027 SMYD5Q6GMV2 418 aa5.11□□□□□ -1.59
XRCC4-203ENST00000396027 ARMC2Q8NEN0 867 aa5.11□□□□□ -1.59
XRCC4-203ENST00000396027 GPR37O15354 613 aa5.1□□□□□ -1.59
XRCC4-203ENST00000396027 HAP1P54257 671 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-203ENST00000396027 FOXD4L5Q5VV16 416 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-203ENST00000396027 PPARGC1BQ86YN6 1023 aaKnown RBP5.1□□□□□ -1.59
XRCC4-203ENST00000396027 KLRG1Q96E93 195 aa5.1□□□□□ -1.59
XRCC4-203ENST00000396027 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
XRCC4-203ENST00000396027 TPSG1Q9NRR2 321 aa5.1□□□□□ -1.59
XRCC4-203ENST00000396027 KDM2AQ9Y2K7 1162 aa5.1□□□□□ -1.59
XRCC4-203ENST00000396027 C1orf229Q6ZS94 237 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-203ENST00000396027 CFHR5Q9BXR6 569 aa5.09□□□□□ -1.59
XRCC4-203ENST00000396027 DYRK1BQ9Y463 629 aa5.09□□□□□ -1.59
XRCC4-203ENST00000396027 F12P00748 615 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-203ENST00000396027 SPATA31C1P0DKV0 1188 aa5.08□□□□□ -1.6
XRCC4-203ENST00000396027 MTMR2Q13614 643 aa5.08□□□□□ -1.6
XRCC4-203ENST00000396027 ZNF395Q9H8N7 513 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-203ENST00000396027 DGKGP49619 791 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 NBPF14Q5TI25 921 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 MAP10Q9P2G4 905 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 CDV3Q9UKY7 258 aaKnown RBP5.07□□□□□ -1.6
XRCC4-203ENST00000396027 GIGYF2Q6Y7W6 1299 aaKnown RBP5.07□□□□□ -1.6
XRCC4-203ENST00000396027 SLCO4C1Q6ZQN7 724 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 VSIG10Q8N0Z9 540 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 PHF24Q9UPV7 400 aa5.07□□□□□ -1.6
XRCC4-203ENST00000396027 TAF7LQ5H9L4 462 aa5.06□□□□□ -1.6
XRCC4-203ENST00000396027 BTBD6Q96KE9 485 aa5.06□□□□□ -1.6
XRCC4-203ENST00000396027 ELNP15502 786 aa5.05□□□□□ -1.6
XRCC4-203ENST00000396027 RNF144AP50876 292 aaPredicted RBP5.05□□□□□ -1.6
XRCC4-203ENST00000396027 RBM26Q5T8P6 1007 aaKnown RBP5.05□□□□□ -1.6
XRCC4-203ENST00000396027 SH3BP5LQ7L8J4 393 aa5.05□□□□□ -1.6
XRCC4-203ENST00000396027 PRICKLE2Q7Z3G6 844 aa5.05□□□□□ -1.6
XRCC4-203ENST00000396027 ADH1AP07327 375 aa5.04□□□□□ -1.6
XRCC4-203ENST00000396027 H2AFB1P0C5Y9 115 aa5.04□□□□□ -1.6
XRCC4-203ENST00000396027 H2AFB2P0C5Z0 115 aa5.04□□□□□ -1.6
XRCC4-203ENST00000396027 RHOQP17081 205 aa5.04□□□□□ -1.6
XRCC4-203ENST00000396027 MDM2Q00987 491 aaPredicted RBP5.04□□□□□ -1.6
XRCC4-203ENST00000396027 NUCKS1Q9H1E3 243 aaKnown RBP5.04□□□□□ -1.6
XRCC4-203ENST00000396027 HMGB1P09429 215 aaKnown RBP5.03□□□□□ -1.6
XRCC4-203ENST00000396027 PDIA4P13667 645 aaKnown RBP5.03□□□□□ -1.6
XRCC4-203ENST00000396027 PTGIRP43119 386 aa5.03□□□□□ -1.6
XRCC4-203ENST00000396027 DIEXFQ68CQ4 756 aaKnown RBP5.03□□□□□ -1.6
XRCC4-203ENST00000396027 MAGEB6P1A0A0J9YX57 407 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 NCLP19338 710 aaKnown RBP5.02□□□□□ -1.61
XRCC4-203ENST00000396027 KCTD15Q96SI1 283 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-203ENST00000396027 GAS2L1Q99501 681 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-203ENST00000396027 RSPH6AQ9H0K4 717 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 FANCIQ9NVI1 1328 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 SPDYE3A6NKU9 549 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 APBA3O96018 575 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 ARID3AQ99856 593 aa5.02□□□□□ -1.61
XRCC4-203ENST00000396027 FAM217BQ9NTX9 383 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-203ENST00000396027 TULP1O00294 542 aaPredicted RBP5.01□□□□□ -1.61
XRCC4-203ENST00000396027 EPXP11678 715 aa5.01□□□□□ -1.61
XRCC4-203ENST00000396027 GPC1P35052 558 aa5.01□□□□□ -1.61
XRCC4-203ENST00000396027 PDE4CQ08493 712 aa5.01□□□□□ -1.61
XRCC4-203ENST00000396027 GPKOWQ92917 476 aaPredicted RBP eCLIP5.01□□□□□ -1.61
XRCC4-203ENST00000396027 TRIM52Q96A61 297 aa5.01□□□□□ -1.61
XRCC4-203ENST00000396027 CLCN1P35523 988 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 ERFEQ4G0M1 354 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 GPIHBP1Q8IV16 184 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 GPCPD1Q9NPB8 672 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 GGA1Q9UJY5 639 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 RNF114Q9Y508 228 aa5□□□□□ -1.61
XRCC4-203ENST00000396027 IRAK1P51617 712 aa4.99□□□□□ -1.61
XRCC4-203ENST00000396027 PRRT3Q5FWE3 981 aa4.99□□□□□ -1.61
XRCC4-203ENST00000396027 RIC3Q7Z5B4 369 aa4.99□□□□□ -1.61
XRCC4-203ENST00000396027 SLC10A4Q96EP9 437 aa4.99□□□□□ -1.61
XRCC4-203ENST00000396027 NACC1Q96RE7 527 aa4.99□□□□□ -1.61
XRCC4-203ENST00000396027 F11P03951 625 aa4.98□□□□□ -1.61
XRCC4-203ENST00000396027 BMP4P12644 408 aa4.98□□□□□ -1.61
XRCC4-203ENST00000396027 GJA5P36382 358 aa4.98□□□□□ -1.61
XRCC4-203ENST00000396027 WDR44Q5JSH3 913 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms