RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 ABCC3O15438 1527 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 KIF1BO60333 1816 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 MADDQ8WXG6 1647 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 SEC24BO95487 1268 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 RIC3Q7Z5B4 369 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 ARHGAP31Q2M1Z3 1444 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 DIP2CQ9Y2E4 1556 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 ZKSCAN1P17029 563 aaPredicted RBP7.99□□□□□ -1.13
BDNF-203ENST00000395978 ZRSR1Q15695 479 aaKnown RBP7.99□□□□□ -1.13
BDNF-203ENST00000395978 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 EXOC6BQ9Y2D4 811 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 TBX22Q9Y458 520 aa7.99□□□□□ -1.13
BDNF-203ENST00000395978 MCM2P49736 904 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 PLEKHF1Q96S99 279 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 IL27Q8NEV9 243 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 RICTORQ6R327 1708 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 E9PCH4 1651 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 LAMC1P11047 1609 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 RNF17Q9BXT8 1623 aaKnown RBP7.98□□□□□ -1.13
BDNF-203ENST00000395978 SMARCA5O60264 1052 aaPredicted RBP7.98□□□□□ -1.13
BDNF-203ENST00000395978 TBC1D9Q6ZT07 1266 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 SPHKAPQ2M3C7 1700 aa7.98□□□□□ -1.13
BDNF-203ENST00000395978 ZBTB7BO15156 539 aaPredicted RBP7.97□□□□□ -1.13
BDNF-203ENST00000395978 FLIIQ13045 1269 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 CNTROBQ8N137 903 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 ATP6V1DQ9Y5K8 247 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 ABCA6Q8N139 1617 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 SRGAP3O43295 1099 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 MRE11P49959 708 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 XPCQ01831 940 aaPredicted RBP7.97□□□□□ -1.13
BDNF-203ENST00000395978 CSPP1Q1MSJ5 1256 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 DNTTIP2Q5QJE6 756 aaKnown RBP7.97□□□□□ -1.13
BDNF-203ENST00000395978 MCTP1Q6DN14 999 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 USHBP1Q8N6Y0 703 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 FOXO3O43524 673 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 RBM33Q96EV2 1170 aaKnown RBP7.97□□□□□ -1.13
BDNF-203ENST00000395978 BRPF3Q9ULD4 1205 aa7.97□□□□□ -1.13
BDNF-203ENST00000395978 FOXD4L6Q3SYB3 417 aaPredicted RBP7.96□□□□□ -1.13
BDNF-203ENST00000395978 FOXD4L3Q6VB84 417 aaPredicted RBP7.96□□□□□ -1.13
BDNF-203ENST00000395978 CWC22Q9HCG8 908 aaKnown RBP7.96□□□□□ -1.13
BDNF-203ENST00000395978 PLEKHG3A1L390 1219 aa7.96□□□□□ -1.13
BDNF-203ENST00000395978 PHF14O94880 888 aa7.96□□□□□ -1.13
BDNF-203ENST00000395978 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.13
BDNF-203ENST00000395978 MTHFSDQ2M296 383 aaKnown RBP7.96□□□□□ -1.13
BDNF-203ENST00000395978 KRT24Q2M2I5 525 aa7.96□□□□□ -1.13
BDNF-203ENST00000395978 MEIS3Q99687 375 aa7.96□□□□□ -1.13
BDNF-203ENST00000395978 IL1RAPL2Q9NP60 686 aa7.96□□□□□ -1.13
BDNF-203ENST00000395978 MAP3K19Q56UN5 1328 aa7.96□□□□□ -1.14
BDNF-203ENST00000395978 FLT4P35916 1363 aa7.96□□□□□ -1.14
BDNF-203ENST00000395978 TMEM2Q9UHN6 1383 aa7.96□□□□□ -1.14
BDNF-203ENST00000395978 A0A0U1RQG5 324 aaPredicted RBP7.96□□□□□ -1.14
BDNF-203ENST00000395978 HTATSF1O43719 755 aaKnown RBP7.96□□□□□ -1.14
BDNF-203ENST00000395978 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
BDNF-203ENST00000395978 LMTK2Q8IWU2 1503 aa7.96□□□□□ -1.14
BDNF-203ENST00000395978 EVA1CP58658 441 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 ERC1Q8IUD2 1116 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 POLR1AO95602 1720 aaPredicted RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 MX1P20591 662 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 EYA1Q99502 592 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 DCTPP1Q9H773 170 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 AGLP35573 1532 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 CHL1O00533 1208 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 GLIPR1L2Q4G1C9 344 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 PPRC1Q5VV67 1664 aaKnown RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 HSP90B1P14625 803 aaKnown RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 TTC22Q5TAA0 569 aa7.95□□□□□ -1.14
BDNF-203ENST00000395978 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
BDNF-203ENST00000395978 SMC3Q9UQE7 1217 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 LRRFIP2Q9Y608 721 aaKnown RBP7.94□□□□□ -1.14
BDNF-203ENST00000395978 METP08581 1390 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 RAB11FIP3O75154 756 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 KCNA6P17658 529 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 KIF1BPQ96EK5 621 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 ARHGEF40Q8TER5 1519 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 LTKP29376 864 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 ISY1Q9ULR0 285 aaKnown RBP7.94□□□□□ -1.14
BDNF-203ENST00000395978 ADGRB3O60242 1522 aa7.94□□□□□ -1.14
BDNF-203ENST00000395978 FRMPD1Q5SYB0 1578 aa7.93□□□□□ -1.14
BDNF-203ENST00000395978 DNAAF4Q8WXU2 420 aa7.93□□□□□ -1.14
BDNF-203ENST00000395978 KIF3AQ9Y496 699 aa7.93□□□□□ -1.14
BDNF-203ENST00000395978 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
BDNF-203ENST00000395978 BCL11BQ9C0K0 894 aaPredicted RBP7.93□□□□□ -1.14
BDNF-203ENST00000395978 AATKQ6ZMQ8 1374 aa7.92□□□□□ -1.14
BDNF-203ENST00000395978 HIP1O00291 1037 aa7.92□□□□□ -1.14
BDNF-203ENST00000395978 CEP85Q6P2H3 762 aa7.92□□□□□ -1.14
BDNF-203ENST00000395978 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
BDNF-203ENST00000395978 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
BDNF-203ENST00000395978 SDSP20132 328 aa7.92□□□□□ -1.14
BDNF-203ENST00000395978 C16orf71Q8IYS4 520 aaPredicted RBP7.92□□□□□ -1.14
BDNF-203ENST00000395978 SNX21Q969T3 373 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms