RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 IL13P35225 146 aa18.72■□□□□ 0.59
RTFDC1-203ENST00000395881 EXOC6Q8TAG9 804 aa18.72■□□□□ 0.59
RTFDC1-203ENST00000395881 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
RTFDC1-203ENST00000395881 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
RTFDC1-203ENST00000395881 NEFMP07197 916 aa18.71■□□□□ 0.59
RTFDC1-203ENST00000395881 FBLN1P23142 703 aa18.71■□□□□ 0.59
RTFDC1-203ENST00000395881 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
RTFDC1-203ENST00000395881 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
RTFDC1-203ENST00000395881 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.584e-8■■■■■ 28.3
RTFDC1-203ENST00000395881 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
RTFDC1-203ENST00000395881 THSD7AQ9UPZ6 1657 aa18.7■□□□□ 0.58
RTFDC1-203ENST00000395881 ABCC6O95255 1503 aa18.69■□□□□ 0.58
RTFDC1-203ENST00000395881 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
RTFDC1-203ENST00000395881 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
RTFDC1-203ENST00000395881 CRB1P82279 1406 aa18.68■□□□□ 0.58
RTFDC1-203ENST00000395881 PLIN1O60240 522 aa18.68■□□□□ 0.58
RTFDC1-203ENST00000395881 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
RTFDC1-203ENST00000395881 KIF24Q5T7B8 1368 aa18.67■□□□□ 0.58
RTFDC1-203ENST00000395881 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
RTFDC1-203ENST00000395881 EP400Q96L91 3159 aa18.67■□□□□ 0.58
RTFDC1-203ENST00000395881 A0A0G2JS52 829 aa18.66■□□□□ 0.58
RTFDC1-203ENST00000395881 MYT1Q01538 1121 aa18.66■□□□□ 0.58
RTFDC1-203ENST00000395881 BARGINQ6ZT62 677 aa18.66■□□□□ 0.58
RTFDC1-203ENST00000395881 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
RTFDC1-203ENST00000395881 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
RTFDC1-203ENST00000395881 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
RTFDC1-203ENST00000395881 RIPK4P57078 832 aa18.65■□□□□ 0.58
RTFDC1-203ENST00000395881 TOM1L2Q6ZVM7 507 aa18.65■□□□□ 0.58
RTFDC1-203ENST00000395881 RGPD1P0DJD0 1748 aa18.64■□□□□ 0.58
RTFDC1-203ENST00000395881 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.58
RTFDC1-203ENST00000395881 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.58
RTFDC1-203ENST00000395881 NFE2L2Q16236 605 aa18.64■□□□□ 0.58
RTFDC1-203ENST00000395881 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.58
RTFDC1-203ENST00000395881 IP6K1Q92551 441 aa18.64■□□□□ 0.57
RTFDC1-203ENST00000395881 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.57
RTFDC1-203ENST00000395881 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
RTFDC1-203ENST00000395881 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
RTFDC1-203ENST00000395881 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
RTFDC1-203ENST00000395881 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
RTFDC1-203ENST00000395881 AAMPQ13685 434 aa18.62■□□□□ 0.57
RTFDC1-203ENST00000395881 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
RTFDC1-203ENST00000395881 ERBB3P21860 1342 aa18.62■□□□□ 0.57
RTFDC1-203ENST00000395881 WNK3Q9BYP7 1800 aa18.61■□□□□ 0.57
RTFDC1-203ENST00000395881 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
RTFDC1-203ENST00000395881 ANKRD24Q8TF21 1146 aa18.61■□□□□ 0.57
RTFDC1-203ENST00000395881 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
RTFDC1-203ENST00000395881 FLT4P35916 1363 aa18.61■□□□□ 0.57
RTFDC1-203ENST00000395881 BCAR3O75815 825 aa18.6■□□□□ 0.57
RTFDC1-203ENST00000395881 HOXC9P31274 260 aa18.6■□□□□ 0.57
RTFDC1-203ENST00000395881 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
RTFDC1-203ENST00000395881 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
RTFDC1-203ENST00000395881 AMPHP49418 695 aa18.59■□□□□ 0.57
RTFDC1-203ENST00000395881 EIF4A2Q14240 407 aaKnown RBP18.59■□□□□ 0.57
RTFDC1-203ENST00000395881 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
RTFDC1-203ENST00000395881 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
RTFDC1-203ENST00000395881 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
RTFDC1-203ENST00000395881 RGPD2P0DJD1 1756 aa18.57■□□□□ 0.56
RTFDC1-203ENST00000395881 RTL1A6NKG5 1358 aa18.57■□□□□ 0.56
RTFDC1-203ENST00000395881 HMOX1P09601 288 aa18.57■□□□□ 0.56
RTFDC1-203ENST00000395881 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
RTFDC1-203ENST00000395881 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
RTFDC1-203ENST00000395881 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
RTFDC1-203ENST00000395881 MS4A1P11836 297 aa18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 FAM208AQ9UK61 1670 aaKnown RBP18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 LRRC37A3O60309 1634 aa18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
RTFDC1-203ENST00000395881 KDRP35968 1356 aa18.54■□□□□ 0.56
RTFDC1-203ENST00000395881 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
RTFDC1-203ENST00000395881 GNAI1P63096 354 aa18.53■□□□□ 0.56
RTFDC1-203ENST00000395881 EXOSC9Q06265 439 aaKnown RBP18.53■□□□□ 0.56
RTFDC1-203ENST00000395881 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
RTFDC1-203ENST00000395881 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
RTFDC1-203ENST00000395881 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
RTFDC1-203ENST00000395881 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
RTFDC1-203ENST00000395881 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
RTFDC1-203ENST00000395881 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
RTFDC1-203ENST00000395881 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
RTFDC1-203ENST00000395881 DDB1Q16531 1140 aa18.51■□□□□ 0.55
RTFDC1-203ENST00000395881 ALDH1L2Q3SY69 923 aa18.51■□□□□ 0.55
RTFDC1-203ENST00000395881 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
RTFDC1-203ENST00000395881 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
RTFDC1-203ENST00000395881 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
RTFDC1-203ENST00000395881 FAM196AQ6ZSG2 479 aa18.5■□□□□ 0.55
RTFDC1-203ENST00000395881 IL2RBP14784 551 aa18.49■□□□□ 0.55
RTFDC1-203ENST00000395881 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
RTFDC1-203ENST00000395881 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
RTFDC1-203ENST00000395881 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
RTFDC1-203ENST00000395881 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
RTFDC1-203ENST00000395881 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
RTFDC1-203ENST00000395881 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
RTFDC1-203ENST00000395881 EXOC5O00471 708 aa18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 TNS1Q9HBL0 1735 aaKnown RBP18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 DEFB132Q7Z7B7 95 aa18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
RTFDC1-203ENST00000395881 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
RTFDC1-203ENST00000395881 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms