RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RGPD3A6NKT7 1758 aaPredicted RBP18.86■□□□□ 0.61
CXCL12-205ENST00000395794 RGPD4Q7Z3J3 1758 aa18.86■□□□□ 0.61
CXCL12-205ENST00000395794 NUP188Q5SRE5 1749 aa18.86■□□□□ 0.61
CXCL12-205ENST00000395794 SYTL4Q96C24 671 aaPredicted RBP18.85■□□□□ 0.61
CXCL12-205ENST00000395794 LRP5O75197 1615 aa18.85■□□□□ 0.61
CXCL12-205ENST00000395794 WASHC2AQ641Q2 1341 aa18.84■□□□□ 0.61
CXCL12-205ENST00000395794 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
CXCL12-205ENST00000395794 PROM2Q8N271 834 aa18.84■□□□□ 0.61
CXCL12-205ENST00000395794 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
CXCL12-205ENST00000395794 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
CXCL12-205ENST00000395794 NHSQ6T4R5 1651 aa18.83■□□□□ 0.61
CXCL12-205ENST00000395794 MEGF6O75095 1541 aa18.83■□□□□ 0.6
CXCL12-205ENST00000395794 NSD2O96028 1365 aa18.82■□□□□ 0.6
CXCL12-205ENST00000395794 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
CXCL12-205ENST00000395794 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
CXCL12-205ENST00000395794 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
CXCL12-205ENST00000395794 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
CXCL12-205ENST00000395794 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
CXCL12-205ENST00000395794 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
CXCL12-205ENST00000395794 RGPD2P0DJD1 1756 aa18.79■□□□□ 0.6
CXCL12-205ENST00000395794 ANO8Q9HCE9 1232 aaPredicted RBP18.79■□□□□ 0.6
CXCL12-205ENST00000395794 KIF7Q2M1P5 1343 aa18.78■□□□□ 0.6
CXCL12-205ENST00000395794 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
CXCL12-205ENST00000395794 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
CXCL12-205ENST00000395794 SLC27A3Q5K4L6 730 aa18.77■□□□□ 0.6
CXCL12-205ENST00000395794 PPP1R1BQ9UD71 204 aaPredicted RBP18.77■□□□□ 0.6
CXCL12-205ENST00000395794 EYA1Q99502 592 aa18.76■□□□□ 0.59
CXCL12-205ENST00000395794 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
CXCL12-205ENST00000395794 BTAF1O14981 1849 aa18.74■□□□□ 0.59
CXCL12-205ENST00000395794 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
CXCL12-205ENST00000395794 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
CXCL12-205ENST00000395794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.72■□□□□ 0.59
CXCL12-205ENST00000395794 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
CXCL12-205ENST00000395794 CYP27B1O15528 508 aa18.71■□□□□ 0.59
CXCL12-205ENST00000395794 ZBTB7AO95365 584 aa18.71■□□□□ 0.59
CXCL12-205ENST00000395794 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
CXCL12-205ENST00000395794 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
CXCL12-205ENST00000395794 NCAPD2Q15021 1401 aa18.71■□□□□ 0.59
CXCL12-205ENST00000395794 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-205ENST00000395794 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
CXCL12-205ENST00000395794 DOT1LQ8TEK3 1739 aa18.7■□□□□ 0.58
CXCL12-205ENST00000395794 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-205ENST00000395794 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
CXCL12-205ENST00000395794 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
CXCL12-205ENST00000395794 PDGFDQ9GZP0 370 aaPredicted RBP18.69■□□□□ 0.58
CXCL12-205ENST00000395794 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
CXCL12-205ENST00000395794 MTFR1LQ9H019 292 aa18.68■□□□□ 0.58
CXCL12-205ENST00000395794 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
CXCL12-205ENST00000395794 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-205ENST00000395794 NKX1-1Q15270 411 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-205ENST00000395794 SMARCC1Q92922 1105 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-205ENST00000395794 TFCP2L1Q9NZI6 479 aa18.67■□□□□ 0.58
CXCL12-205ENST00000395794 IGSF1Q8N6C5 1336 aa18.67■□□□□ 0.58
CXCL12-205ENST00000395794 KCNQ4P56696 695 aa18.66■□□□□ 0.58
CXCL12-205ENST00000395794 ZNF827Q17R98 1081 aa18.66■□□□□ 0.58
CXCL12-205ENST00000395794 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
CXCL12-205ENST00000395794 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
CXCL12-205ENST00000395794 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
CXCL12-205ENST00000395794 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
CXCL12-205ENST00000395794 PHKG2P15735 406 aa18.65■□□□□ 0.58
CXCL12-205ENST00000395794 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.57
CXCL12-205ENST00000395794 CASZ1Q86V15 1759 aa18.64■□□□□ 0.57
CXCL12-205ENST00000395794 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
CXCL12-205ENST00000395794 AMOTQ4VCS5 1084 aa18.64■□□□□ 0.57
CXCL12-205ENST00000395794 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
CXCL12-205ENST00000395794 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
CXCL12-205ENST00000395794 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
CXCL12-205ENST00000395794 MTHFSP49914 203 aa18.63■□□□□ 0.57
CXCL12-205ENST00000395794 PALLDQ8WX93 1383 aa18.63■□□□□ 0.57
CXCL12-205ENST00000395794 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-205ENST00000395794 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
CXCL12-205ENST00000395794 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
CXCL12-205ENST00000395794 PIGBQ92521 554 aa18.62■□□□□ 0.57
CXCL12-205ENST00000395794 PTGER2P43116 358 aa18.61■□□□□ 0.57
CXCL12-205ENST00000395794 IL13P35225 146 aa18.6■□□□□ 0.57
CXCL12-205ENST00000395794 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
CXCL12-205ENST00000395794 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-205ENST00000395794 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
CXCL12-205ENST00000395794 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
CXCL12-205ENST00000395794 LY75O60449 1722 aa18.59■□□□□ 0.57
CXCL12-205ENST00000395794 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.57
CXCL12-205ENST00000395794 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.57
CXCL12-205ENST00000395794 POLD1P28340 1107 aa18.58■□□□□ 0.56
CXCL12-205ENST00000395794 ARXQ96QS3 562 aa18.58■□□□□ 0.56
CXCL12-205ENST00000395794 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
CXCL12-205ENST00000395794 ERVV-2B6SEH9 535 aa18.57■□□□□ 0.56
CXCL12-205ENST00000395794 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
CXCL12-205ENST00000395794 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
CXCL12-205ENST00000395794 AK7Q96M32 723 aa18.56■□□□□ 0.56
CXCL12-205ENST00000395794 LOC102724428A0A0B4J2F2 783 aa18.55■□□□□ 0.56
CXCL12-205ENST00000395794 SIK1P57059 783 aa18.55■□□□□ 0.56
CXCL12-205ENST00000395794 CABP4P57796 275 aa18.55■□□□□ 0.56
CXCL12-205ENST00000395794 ASAP1Q9ULH1 1129 aa18.55■□□□□ 0.56
CXCL12-205ENST00000395794 KDRP35968 1356 aa18.55■□□□□ 0.56
CXCL12-205ENST00000395794 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
CXCL12-205ENST00000395794 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
CXCL12-205ENST00000395794 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
CXCL12-205ENST00000395794 ATP6V1AP38606 617 aa18.53■□□□□ 0.56
CXCL12-205ENST00000395794 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
CXCL12-205ENST00000395794 ITGB4P16144 1822 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms