RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
CLDND1-204ENST00000394185 CHL1O00533 1208 aa23■■□□□ 1.27
CLDND1-204ENST00000394185 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
CLDND1-204ENST00000394185 ALDH1L2Q3SY69 923 aa23■■□□□ 1.27
CLDND1-204ENST00000394185 FTSJ3Q8IY81 847 aaKnown RBP23■■□□□ 1.27
CLDND1-204ENST00000394185 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
CLDND1-204ENST00000394185 RGPD2P0DJD1 1756 aa23■■□□□ 1.27
CLDND1-204ENST00000394185 ATF7IPQ6VMQ6 1270 aa22.99■■□□□ 1.27
CLDND1-204ENST00000394185 CABLES1Q8TDN4 633 aa22.99■■□□□ 1.27
CLDND1-204ENST00000394185 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
CLDND1-204ENST00000394185 IGHDP01880 384 aa22.98■■□□□ 1.27
CLDND1-204ENST00000394185 BRINP3Q76B58 766 aa22.98■■□□□ 1.27
CLDND1-204ENST00000394185 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
CLDND1-204ENST00000394185 MVPQ14764 893 aaKnown RBP22.97■■□□□ 1.27
CLDND1-204ENST00000394185 CENPQQ7L2Z9 268 aaPredicted RBP22.97■■□□□ 1.27
CLDND1-204ENST00000394185 PXDNQ92626 1479 aa22.96■■□□□ 1.27
CLDND1-204ENST00000394185 MRPL50Q8N5N7 158 aaKnown RBP22.96■■□□□ 1.27
CLDND1-204ENST00000394185 ANKRD24Q8TF21 1146 aa22.96■■□□□ 1.27
CLDND1-204ENST00000394185 KIF16BQ96L93 1317 aa22.95■■□□□ 1.26
CLDND1-204ENST00000394185 PCDHB15Q9Y5E8 787 aa22.95■■□□□ 1.26
CLDND1-204ENST00000394185 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
CLDND1-204ENST00000394185 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
CLDND1-204ENST00000394185 TNS3Q68CZ2 1445 aa22.94■■□□□ 1.26
CLDND1-204ENST00000394185 TMEM57Q8N5G2 664 aa22.93■■□□□ 1.26
CLDND1-204ENST00000394185 IL17REQ8NFR9 667 aa22.93■■□□□ 1.26
CLDND1-204ENST00000394185 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
CLDND1-204ENST00000394185 BRPF1P55201 1214 aaPredicted RBP22.92■■□□□ 1.26
CLDND1-204ENST00000394185 SLAIN2Q9P270 581 aa22.92■■□□□ 1.26
CLDND1-204ENST00000394185 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
CLDND1-204ENST00000394185 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
CLDND1-204ENST00000394185 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
CLDND1-204ENST00000394185 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
CLDND1-204ENST00000394185 IPO8O15397 1037 aaKnown RBP22.9■■□□□ 1.26
CLDND1-204ENST00000394185 LRRC37A3O60309 1634 aa22.89■■□□□ 1.26
CLDND1-204ENST00000394185 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
CLDND1-204ENST00000394185 MS4A1P11836 297 aa22.89■■□□□ 1.25
CLDND1-204ENST00000394185 ERBB3P21860 1342 aa22.89■■□□□ 1.25
CLDND1-204ENST00000394185 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
CLDND1-204ENST00000394185 NCAPD2Q15021 1401 aa22.87■■□□□ 1.25
CLDND1-204ENST00000394185 KIAA0232Q92628 1395 aa22.87■■□□□ 1.25
CLDND1-204ENST00000394185 LGR6Q9HBX8 967 aa22.86■■□□□ 1.25
CLDND1-204ENST00000394185 DDX19BQ9UMR2 479 aa22.85■■□□□ 1.25
CLDND1-204ENST00000394185 AAMPQ13685 434 aa22.84■■□□□ 1.25
CLDND1-204ENST00000394185 CRYBG1Q9Y4K1 1723 aa22.84■■□□□ 1.25
CLDND1-204ENST00000394185 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.25
CLDND1-204ENST00000394185 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.24
CLDND1-204ENST00000394185 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
CLDND1-204ENST00000394185 COL18A1P39060 1754 aa22.82■■□□□ 1.24
CLDND1-204ENST00000394185 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
CLDND1-204ENST00000394185 RGS3P49796 1198 aa22.82■■□□□ 1.24
CLDND1-204ENST00000394185 ZBTB40Q9NUA8 1239 aa22.82■■□□□ 1.24
CLDND1-204ENST00000394185 CEMIPQ8WUJ3 1361 aa22.81■■□□□ 1.24
CLDND1-204ENST00000394185 ABCC4O15439 1325 aa22.81■■□□□ 1.24
CLDND1-204ENST00000394185 TAF7Q15545 349 aaPredicted RBP22.8■■□□□ 1.24
CLDND1-204ENST00000394185 MPRIPQ6WCQ1 1025 aa22.8■■□□□ 1.24
CLDND1-204ENST00000394185 NLRP2Q9NX02 1062 aa22.8■■□□□ 1.24
CLDND1-204ENST00000394185 PLEKHO1Q53GL0 409 aaPredicted RBP22.8■■□□□ 1.24
CLDND1-204ENST00000394185 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
CLDND1-204ENST00000394185 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
CLDND1-204ENST00000394185 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
CLDND1-204ENST00000394185 RGS12O14924 1447 aa22.77■■□□□ 1.24
CLDND1-204ENST00000394185 PDE4AP27815 886 aa22.77■■□□□ 1.24
CLDND1-204ENST00000394185 AMOTQ4VCS5 1084 aa22.77■■□□□ 1.24
CLDND1-204ENST00000394185 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
CLDND1-204ENST00000394185 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
CLDND1-204ENST00000394185 NECTIN2Q92692 538 aa22.76■■□□□ 1.23
CLDND1-204ENST00000394185 G2E3Q7L622 706 aa22.76■■□□□ 1.23
CLDND1-204ENST00000394185 CPDO75976 1380 aa22.75■■□□□ 1.23
CLDND1-204ENST00000394185 HAP1P54257 671 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-204ENST00000394185 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
CLDND1-204ENST00000394185 RWDD1Q9H446 243 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-204ENST00000394185 C1orf115Q9H7X2 142 aa22.75■■□□□ 1.23
CLDND1-204ENST00000394185 FAM208AQ9UK61 1670 aaKnown RBP22.74■■□□□ 1.23
CLDND1-204ENST00000394185 KCNQ3O43525 872 aa22.74■■□□□ 1.23
CLDND1-204ENST00000394185 C1orf141Q5JVX7 400 aa22.74■■□□□ 1.23
CLDND1-204ENST00000394185 MEGF6O75095 1541 aa22.74■■□□□ 1.23
CLDND1-204ENST00000394185 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
CLDND1-204ENST00000394185 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
CLDND1-204ENST00000394185 RAPGEF4Q8WZA2 1011 aa22.72■■□□□ 1.23
CLDND1-204ENST00000394185 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
CLDND1-204ENST00000394185 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
CLDND1-204ENST00000394185 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
CLDND1-204ENST00000394185 TEFQ10587 303 aa22.7■■□□□ 1.23
CLDND1-204ENST00000394185 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.23
CLDND1-204ENST00000394185 NHSL1Q5SYE7 1610 aa22.69■■□□□ 1.22
CLDND1-204ENST00000394185 PTPRCP08575 1304 aa22.69■■□□□ 1.22
CLDND1-204ENST00000394185 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
CLDND1-204ENST00000394185 F6X3S4 739 aa22.69■■□□□ 1.22
CLDND1-204ENST00000394185 EIF4A1P60842 406 aaKnown RBP22.69■■□□□ 1.22
CLDND1-204ENST00000394185 ABCC6O95255 1503 aa22.68■■□□□ 1.22
CLDND1-204ENST00000394185 INTS3Q68E01 1043 aaKnown RBP22.67■■□□□ 1.22
CLDND1-204ENST00000394185 TATP17735 454 aaPredicted RBP22.67■■□□□ 1.22
CLDND1-204ENST00000394185 VIRMAQ69YN4 1812 aaKnown RBP22.67■■□□□ 1.22
CLDND1-204ENST00000394185 ABCA3Q99758 1704 aa22.67■■□□□ 1.22
CLDND1-204ENST00000394185 CCDC30Q5VVM6 783 aa22.66■■□□□ 1.22
CLDND1-204ENST00000394185 STK31Q9BXU1 1019 aa22.66■■□□□ 1.22
CLDND1-204ENST00000394185 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
CLDND1-204ENST00000394185 SIRT2Q8IXJ6 389 aa22.65■■□□□ 1.22
CLDND1-204ENST00000394185 C8orf34Q49A92 452 aa22.65■■□□□ 1.22
CLDND1-204ENST00000394185 HDGFL1Q5TGJ6 251 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms