RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.72■■■□□ 2.35
RARA-203ENST00000394086 LTN1O94822 1766 aa29.72■■■□□ 2.35
RARA-203ENST00000394086 COL18A1P39060 1754 aa29.72■■■□□ 2.35
RARA-203ENST00000394086 NRAPQ86VF7 1730 aa29.71■■■□□ 2.35
RARA-203ENST00000394086 LARP1Q6PKG0 1096 aaKnown RBP29.71■■■□□ 2.35
RARA-203ENST00000394086 IP6K1Q92551 441 aa29.71■■■□□ 2.35
RARA-203ENST00000394086 MAPK8IP3Q9UPT6 1336 aa29.7■■■□□ 2.34
RARA-203ENST00000394086 ANKRD26Q9UPS8 1709 aa29.7■■■□□ 2.34
RARA-203ENST00000394086 COL5A2P05997 1499 aaPredicted RBP29.69■■■□□ 2.34
RARA-203ENST00000394086 EMILIN1Q9Y6C2 1016 aa29.69■■■□□ 2.34
RARA-203ENST00000394086 HOXC9P31274 260 aa29.68■■■□□ 2.34
RARA-203ENST00000394086 CSB-PGBD3P0DP91 1061 aa29.67■■■□□ 2.34
RARA-203ENST00000394086 ILDR2Q71H61 639 aa29.66■■■□□ 2.34
RARA-203ENST00000394086 POLKQ9UBT6 870 aa29.66■■■□□ 2.34
RARA-203ENST00000394086 SPATA31A5Q5VU36 1347 aa29.66■■■□□ 2.34
RARA-203ENST00000394086 SPATA31A7Q8IWB4 1347 aa29.66■■■□□ 2.34
RARA-203ENST00000394086 RGPD5Q99666 1765 aa29.65■■■□□ 2.34
RARA-203ENST00000394086 LTV1Q96GA3 475 aaPredicted RBP29.65■■■□□ 2.34
RARA-203ENST00000394086 ABCC6O95255 1503 aa29.65■■■□□ 2.34
RARA-203ENST00000394086 TOM1L2Q6ZVM7 507 aa29.64■■■□□ 2.34
RARA-203ENST00000394086 ANKRD24Q8TF21 1146 aa29.64■■■□□ 2.34
RARA-203ENST00000394086 WDR17Q8IZU2 1322 aa29.63■■■□□ 2.33
RARA-203ENST00000394086 SKAP1Q86WV1 359 aa29.63■■■□□ 2.33
RARA-203ENST00000394086 SPATA31A1Q5TZJ5 1347 aa29.63■■■□□ 2.33
RARA-203ENST00000394086 HSP90AB2PQ58FF8 381 aa29.62■■■□□ 2.33
RARA-203ENST00000394086 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
RARA-203ENST00000394086 ERBB3P21860 1342 aa29.61■■■□□ 2.33
RARA-203ENST00000394086 FLT4P35916 1363 aa29.61■■■□□ 2.33
RARA-203ENST00000394086 MAP2P11137 1827 aaKnown RBP29.6■■■□□ 2.33
RARA-203ENST00000394086 GLI3P10071 1580 aa29.6■■■□□ 2.33
RARA-203ENST00000394086 CRB1P82279 1406 aa29.6■■■□□ 2.33
RARA-203ENST00000394086 KIF24Q5T7B8 1368 aa29.59■■■□□ 2.33
RARA-203ENST00000394086 FAM98CQ17RN3 349 aaKnown RBP29.59■■■□□ 2.33
RARA-203ENST00000394086 NCBP3Q53F19 620 aaKnown RBP29.59■■■□□ 2.33
RARA-203ENST00000394086 APAF1O14727 1248 aa29.59■■■□□ 2.33
RARA-203ENST00000394086 NLRP2Q9NX02 1062 aa29.59■■■□□ 2.33
RARA-203ENST00000394086 RTN4Q9NQC3 1192 aaKnown RBP29.58■■■□□ 2.33
RARA-203ENST00000394086 PEAK1Q9H792 1746 aa29.58■■■□□ 2.33
RARA-203ENST00000394086 TCP11L2Q8N4U5 519 aa29.57■■■□□ 2.32
RARA-203ENST00000394086 A0A0G2JS52 829 aa29.56■■■□□ 2.32
RARA-203ENST00000394086 BECN1Q14457 450 aa29.55■■■□□ 2.32
RARA-203ENST00000394086 RGS3P49796 1198 aa29.55■■■□□ 2.32
RARA-203ENST00000394086 CARD10Q9BWT7 1032 aa29.55■■■□□ 2.32
RARA-203ENST00000394086 FRAT1Q92837 279 aaPredicted RBP29.54■■■□□ 2.32
RARA-203ENST00000394086 CLUAP1Q96AJ1 413 aa29.54■■■□□ 2.32
RARA-203ENST00000394086 RGS12O14924 1447 aa29.54■■■□□ 2.32
RARA-203ENST00000394086 ONECUT3O60422 494 aaPredicted RBP29.53■■■□□ 2.32
RARA-203ENST00000394086 SEPT12Q8IYM1 358 aa29.53■■■□□ 2.32
RARA-203ENST00000394086 CDK12Q9NYV4 1490 aaPredicted RBP29.53■■■□□ 2.32
RARA-203ENST00000394086 MTHFSP49914 203 aa29.52■■■□□ 2.32
RARA-203ENST00000394086 THRAP3Q9Y2W1 955 aaKnown RBP29.52■■■□□ 2.32
RARA-203ENST00000394086 BARGINQ6ZT62 677 aa29.51■■■□□ 2.31
RARA-203ENST00000394086 SLC4A3P48751 1232 aa29.5■■■□□ 2.31
RARA-203ENST00000394086 CCDC146Q8IYE0 955 aa29.5■■■□□ 2.31
RARA-203ENST00000394086 SPINK5Q9NQ38 1064 aaPredicted RBP29.5■■■□□ 2.31
RARA-203ENST00000394086 BCAR3O75815 825 aa29.49■■■□□ 2.31
RARA-203ENST00000394086 NBPF6Q5VWK0 638 aa29.47■■■□□ 2.31
RARA-203ENST00000394086 NBPF4Q96M43 638 aa29.47■■■□□ 2.31
RARA-203ENST00000394086 WWC1Q8IX03 1113 aa29.46■■■□□ 2.31
RARA-203ENST00000394086 EIF4A2Q14240 407 aaKnown RBP29.45■■■□□ 2.31
RARA-203ENST00000394086 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.45■■■□□ 2.3
RARA-203ENST00000394086 IGHDP01880 384 aa29.44■■■□□ 2.3
RARA-203ENST00000394086 WDR63Q8IWG1 891 aa29.44■■■□□ 2.3
RARA-203ENST00000394086 USHBP1Q8N6Y0 703 aa29.44■■■□□ 2.3
RARA-203ENST00000394086 CCDC27Q2M243 656 aa29.44■■■□□ 2.3
RARA-203ENST00000394086 FRAT2O75474 233 aaPredicted RBP29.43■■■□□ 2.3
RARA-203ENST00000394086 CANXP27824 592 aaKnown RBP29.42■■■□□ 2.3
RARA-203ENST00000394086 UPF2Q9HAU5 1272 aaKnown RBP29.42■■■□□ 2.3
RARA-203ENST00000394086 BRPF3Q9ULD4 1205 aa29.42■■■□□ 2.3
RARA-203ENST00000394086 RUNDC1Q96C34 613 aa29.41■■■□□ 2.3
RARA-203ENST00000394086 FAM208AQ9UK61 1670 aaKnown RBP29.41■■■□□ 2.3
RARA-203ENST00000394086 EYA1Q99502 592 aa29.4■■■□□ 2.3
RARA-203ENST00000394086 CDCA7Q9BWT1 371 aaPredicted RBP29.4■■■□□ 2.3
RARA-203ENST00000394086 RGPD2P0DJD1 1756 aa29.4■■■□□ 2.3
RARA-203ENST00000394086 IL2RBP14784 551 aa29.39■■■□□ 2.3
RARA-203ENST00000394086 THSD7AQ9UPZ6 1657 aa29.39■■■□□ 2.3
RARA-203ENST00000394086 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
RARA-203ENST00000394086 FAM43AQ8N2R8 423 aa29.37■■■□□ 2.29
RARA-203ENST00000394086 DISP2A7MBM2 1401 aa29.36■■■□□ 2.29
RARA-203ENST00000394086 IL13P35225 146 aa29.36■■■□□ 2.29
RARA-203ENST00000394086 DDB1Q16531 1140 aa29.36■■■□□ 2.29
RARA-203ENST00000394086 DIAPH1O60610 1272 aaKnown RBP29.35■■■□□ 2.29
RARA-203ENST00000394086 CT47B1P0C2W7 299 aaPredicted RBP29.35■■■□□ 2.29
RARA-203ENST00000394086 RARSP54136 660 aaKnown RBP29.35■■■□□ 2.29
RARA-203ENST00000394086 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
RARA-203ENST00000394086 BRWD3Q6RI45 1802 aa29.34■■■□□ 2.29
RARA-203ENST00000394086 EXOC5O00471 708 aa29.33■■■□□ 2.29
RARA-203ENST00000394086 FAM182BQ5T319 152 aa29.33■■■□□ 2.29
RARA-203ENST00000394086 RAPGEF4Q8WZA2 1011 aa29.33■■■□□ 2.29
RARA-203ENST00000394086 COG6Q9Y2V7 657 aa29.33■■■□□ 2.29
RARA-203ENST00000394086 RSPH6AQ9H0K4 717 aa29.32■■■□□ 2.28
RARA-203ENST00000394086 L1TD1Q5T7N2 865 aaKnown RBP29.32■■■□□ 2.28
RARA-203ENST00000394086 RWDD1Q9H446 243 aaPredicted RBP29.31■■■□□ 2.28
RARA-203ENST00000394086 IGSF1Q8N6C5 1336 aa29.31■■■□□ 2.28
RARA-203ENST00000394086 WNK3Q9BYP7 1800 aa29.3■■■□□ 2.28
RARA-203ENST00000394086 PARP4Q9UKK3 1724 aaKnown RBP29.3■■■□□ 2.28
RARA-203ENST00000394086 TATP17735 454 aaPredicted RBP29.29■■■□□ 2.28
RARA-203ENST00000394086 PANK1Q8TE04 598 aa29.29■■■□□ 2.28
RARA-203ENST00000394086 TBC1D32Q96NH3 1257 aa29.29■■■□□ 2.28
RARA-203ENST00000394086 MEGF6O75095 1541 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms