RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 SPG7Q9UQ90 795 aa25.24■■□□□ 1.63
NME1-203ENST00000393196 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
NME1-203ENST00000393196 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
NME1-203ENST00000393196 IL13P35225 146 aa25.23■■□□□ 1.63
NME1-203ENST00000393196 BCL11BQ9C0K0 894 aaPredicted RBP25.23■■□□□ 1.63
NME1-203ENST00000393196 PARD3Q8TEW0 1356 aa25.22■■□□□ 1.63
NME1-203ENST00000393196 RALBP1Q15311 655 aa25.21■■□□□ 1.63
NME1-203ENST00000393196 ZNF316A6NFI3 1004 aaPredicted RBP25.2■■□□□ 1.62
NME1-203ENST00000393196 APBA3O96018 575 aa25.2■■□□□ 1.62
NME1-203ENST00000393196 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
NME1-203ENST00000393196 RGPD2P0DJD1 1756 aa25.19■■□□□ 1.62
NME1-203ENST00000393196 KDRP35968 1356 aa25.18■■□□□ 1.62
NME1-203ENST00000393196 AMOTQ4VCS5 1084 aa25.17■■□□□ 1.62
NME1-203ENST00000393196 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
NME1-203ENST00000393196 PLEKHO1Q53GL0 409 aaPredicted RBP25.16■■□□□ 1.62
NME1-203ENST00000393196 SULT6B1Q6IMI4 303 aa25.16■■□□□ 1.62
NME1-203ENST00000393196 DEFB132Q7Z7B7 95 aa25.16■■□□□ 1.62
NME1-203ENST00000393196 PLSCR1O15162 318 aa25.13■■□□□ 1.61
NME1-203ENST00000393196 COL3A1P02461 1466 aaPredicted RBP25.13■■□□□ 1.61
NME1-203ENST00000393196 TNS1Q9HBL0 1735 aaKnown RBP25.12■■□□□ 1.61
NME1-203ENST00000393196 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
NME1-203ENST00000393196 IFNL2Q8IZJ0 200 aa25.12■■□□□ 1.61
NME1-203ENST00000393196 CYP27B1O15528 508 aa25.11■■□□□ 1.61
NME1-203ENST00000393196 HSP90AB1P08238 724 aaKnown RBP25.11■■□□□ 1.61
NME1-203ENST00000393196 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
NME1-203ENST00000393196 U2SURPO15042 1029 aaKnown RBP25.1■■□□□ 1.61
NME1-203ENST00000393196 NKX1-1Q15270 411 aaPredicted RBP25.1■■□□□ 1.61
NME1-203ENST00000393196 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
NME1-203ENST00000393196 ACSBG1Q96GR2 724 aa25.1■■□□□ 1.61
NME1-203ENST00000393196 CAMKK2Q96RR4 588 aa25.1■■□□□ 1.61
NME1-203ENST00000393196 NHSQ6T4R5 1651 aa25.08■■□□□ 1.61
NME1-203ENST00000393196 KCNQ2O43526 872 aa25.07■■□□□ 1.6
NME1-203ENST00000393196 PHKG2P15735 406 aa25.07■■□□□ 1.6
NME1-203ENST00000393196 MYBBP1AQ9BQG0 1328 aaKnown RBP25.07■■□□□ 1.6
NME1-203ENST00000393196 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
NME1-203ENST00000393196 ZNF530Q6P9A1 599 aaPredicted RBP25.06■■□□□ 1.6
NME1-203ENST00000393196 SYTL4Q96C24 671 aaPredicted RBP25.06■■□□□ 1.6
NME1-203ENST00000393196 SBF2Q86WG5 1849 aa25.05■■□□□ 1.6
NME1-203ENST00000393196 HMOX1P09601 288 aa25.05■■□□□ 1.6
NME1-203ENST00000393196 PRIM1P49642 420 aaKnown RBP25.05■■□□□ 1.6
NME1-203ENST00000393196 EZH2Q15910 746 aaKnown RBP25.05■■□□□ 1.6
NME1-203ENST00000393196 SHANK3Q9BYB0 1731 aa25.04■■□□□ 1.6
NME1-203ENST00000393196 HMGB2P26583 209 aaKnown RBP25.04■■□□□ 1.6
NME1-203ENST00000393196 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
NME1-203ENST00000393196 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
NME1-203ENST00000393196 DCAF5Q96JK2 942 aa25.03■■□□□ 1.6
NME1-203ENST00000393196 PTF1AQ7RTS3 328 aa25.02■■□□□ 1.6
NME1-203ENST00000393196 U2AF1L5P0DN76 240 aaPredicted RBP25.01■■□□□ 1.59
NME1-203ENST00000393196 U2AF1Q01081 240 aaKnown RBP eCLIP25.01■■□□□ 1.59
NME1-203ENST00000393196 NBPF14Q5TI25 921 aa25.01■■□□□ 1.59
NME1-203ENST00000393196 PRKRIP1Q9H875 184 aaPredicted RBP25.01■■□□□ 1.59
NME1-203ENST00000393196 FCHSD2O94868 740 aa25■■□□□ 1.59
NME1-203ENST00000393196 ERVV-2B6SEH9 535 aa24.99■■□□□ 1.59
NME1-203ENST00000393196 AKAP4Q5JQC9 854 aa24.99■■□□□ 1.59
NME1-203ENST00000393196 SLC27A3Q5K4L6 730 aa24.98■■□□□ 1.59
NME1-203ENST00000393196 GAS2L2Q8NHY3 880 aa24.98■■□□□ 1.59
NME1-203ENST00000393196 SMARCC1Q92922 1105 aaPredicted RBP24.98■■□□□ 1.59
NME1-203ENST00000393196 PNNQ9H307 717 aaKnown RBP24.98■■□□□ 1.59
NME1-203ENST00000393196 TMOD3Q9NYL9 352 aa24.98■■□□□ 1.59
NME1-203ENST00000393196 NEFMP07197 916 aa24.97■■□□□ 1.59
NME1-203ENST00000393196 TXNRD1Q16881 649 aa24.97■■□□□ 1.59
NME1-203ENST00000393196 DOT1LQ8TEK3 1739 aa24.97■■□□□ 1.59
NME1-203ENST00000393196 MPRIPQ6WCQ1 1025 aa24.96■■□□□ 1.59
NME1-203ENST00000393196 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
NME1-203ENST00000393196 PRKAR2BP31323 418 aa24.94■■□□□ 1.58
NME1-203ENST00000393196 RREB1Q92766 1687 aa24.93■■□□□ 1.58
NME1-203ENST00000393196 BTAF1O14981 1849 aa24.93■■□□□ 1.58
NME1-203ENST00000393196 MTHFSDQ2M296 383 aaKnown RBP24.92■■□□□ 1.58
NME1-203ENST00000393196 CABP4P57796 275 aa24.91■■□□□ 1.58
NME1-203ENST00000393196 PROM2Q8N271 834 aa24.91■■□□□ 1.58
NME1-203ENST00000393196 PIGBQ92521 554 aa24.91■■□□□ 1.58
NME1-203ENST00000393196 KAT6BQ8WYB5 2073 aa24.9■■□□□ 1.58
NME1-203ENST00000393196 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.58
NME1-203ENST00000393196 ANP32CO43423 234 aa24.89■■□□□ 1.58
NME1-203ENST00000393196 PALLDQ8WX93 1383 aa24.89■■□□□ 1.57
NME1-203ENST00000393196 GNAT3A8MTJ3 354 aa24.88■■□□□ 1.57
NME1-203ENST00000393196 STK32BQ9NY57 414 aa24.88■■□□□ 1.57
NME1-203ENST00000393196 MAP3K5Q99683 1374 aa24.88■■□□□ 1.57
NME1-203ENST00000393196 WDR43Q15061 677 aaKnown RBP eCLIP24.87■■□□□ 1.57
NME1-203ENST00000393196 TOGARAM1Q9Y4F4 1720 aa24.86■■□□□ 1.57
NME1-203ENST00000393196 CCNL1Q9UK58 526 aaPredicted RBP24.86■■□□□ 1.57
NME1-203ENST00000393196 NUP188Q5SRE5 1749 aa24.86■■□□□ 1.57
NME1-203ENST00000393196 RNMTO43148 476 aaKnown RBP24.85■■□□□ 1.57
NME1-203ENST00000393196 R3HDM1Q15032 1099 aaKnown RBP24.85■■□□□ 1.57
NME1-203ENST00000393196 MAPK8IP3Q9UPT6 1336 aa24.85■■□□□ 1.57
NME1-203ENST00000393196 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
NME1-203ENST00000393196 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
NME1-203ENST00000393196 SLC52A2Q9HAB3 445 aa24.83■■□□□ 1.57
NME1-203ENST00000393196 RTF1Q92541 710 aaKnown RBP24.82■■□□□ 1.56
NME1-203ENST00000393196 PSDA5PKW4 1024 aaPredicted RBP24.81■■□□□ 1.56
NME1-203ENST00000393196 SLC15A2Q16348 729 aa24.81■■□□□ 1.56
NME1-203ENST00000393196 NFATC2IPQ8NCF5 419 aa24.81■■□□□ 1.56
NME1-203ENST00000393196 ATG3Q9NT62 314 aa24.81■■□□□ 1.56
NME1-203ENST00000393196 LRRC4BQ9NT99 713 aa24.81■■□□□ 1.56
NME1-203ENST00000393196 TEFQ10587 303 aa24.8■■□□□ 1.56
NME1-203ENST00000393196 ANO8Q9HCE9 1232 aaPredicted RBP24.8■■□□□ 1.56
NME1-203ENST00000393196 ASAP1Q9ULH1 1129 aa24.8■■□□□ 1.56
NME1-203ENST00000393196 MRC1P22897 1456 aa24.8■■□□□ 1.56
NME1-203ENST00000393196 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
NME1-203ENST00000393196 SIK1P57059 783 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms