RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RPGRIP1LQ68CZ1 1315 aa15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 KINO60870 393 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 TEX35Q5T0J7 233 aa15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 MEIS3Q99687 375 aa15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 USP19O94966 1318 aa15.67■□□□□ 0.1
TRAPPC9-201ENST00000389328 CSB-PGBD3P0DP91 1061 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 CPLX1O14810 134 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 FYB1O15117 783 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 NEXNQ0ZGT2 675 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 SPATA32Q96LK8 384 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 FAM177BA6PVY3 158 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 SMC2O95347 1197 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 GOLGA6L1Q8N7Z2 621 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 C16orf45Q96MC5 204 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 TOMM22Q9NS69 142 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 KDM5CP41229 1560 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 GIMAP6Q6P9H5 292 aa15.66■□□□□ 0.1
TRAPPC9-201ENST00000389328 NOLC1Q14978 699 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 PLEKHM2Q8IWE5 1019 aa15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC9-201ENST00000389328 NLRP6P59044 892 aa15.64■□□□□ 0.1
TRAPPC9-201ENST00000389328 ARHGAP45Q92619 1136 aa15.64■□□□□ 0.1
TRAPPC9-201ENST00000389328 ARGLU1Q9NWB6 273 aaPredicted RBP15.64■□□□□ 0.1
TRAPPC9-201ENST00000389328 VAMP4O75379 141 aa15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 CCDC66A2RUB6 948 aa15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 ZBTB7BO15156 539 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 HS1BP3Q53T59 392 aa15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 NOL7Q9UMY1 257 aaKnown RBP15.64■□□□□ 0.09
TRAPPC9-201ENST00000389328 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 NAT10Q9H0A0 1025 aaKnown RBP15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 MAGI2Q86UL8 1455 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 TULP1O00294 542 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 RAPGEF3O95398 923 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 USP26Q9BXU7 913 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 ERICH4A6NGS2 130 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 SIL1Q9H173 461 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 RTEL1-TNFRSF6BF6WH68 1400 aa15.63■□□□□ 0.09
TRAPPC9-201ENST00000389328 BLOC1S2Q6QNY1 142 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 KDM5BQ9UGL1 1544 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 STX6O43752 255 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 ANKRD44Q8N8A2 993 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 CNPY2Q9Y2B0 182 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 SAMD9Q5K651 1589 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 KDM4AO75164 1064 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 PDE1AP54750 535 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 PRIMPOLQ96LW4 560 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 NEUROD6Q96NK8 337 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC9-201ENST00000389328 NSD2O96028 1365 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 PES1O00541 588 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 ITSN2Q9NZM3 1697 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 DNAJC2Q99543 621 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 DDX58O95786 925 aaKnown RBP15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 GPS2Q13227 327 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 DDX11Q96FC9 970 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
TRAPPC9-201ENST00000389328 IGSF3O75054 1194 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 TNNT1P13805 278 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 PDILTQ8N807 584 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 ZSCAN31Q96LW9 406 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 ME1P48163 572 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 CHAMP1Q96JM3 812 aa15.6■□□□□ 0.09
TRAPPC9-201ENST00000389328 AACSQ86V21 672 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 LMBRD1Q9NUN5 540 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 UBE2HP62256 183 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 IDI1Q13907 227 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 FAM177A1Q8N128 213 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 CD2BP2O95400 341 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 ZNF445P59923 1031 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 PKP1Q13835 747 aa15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 CGNQ9P2M7 1197 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-201ENST00000389328 UVSSAQ2YD98 709 aa15.58■□□□□ 0.09
TRAPPC9-201ENST00000389328 CHMP4CQ96CF2 233 aa15.58■□□□□ 0.09
TRAPPC9-201ENST00000389328 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms