RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 NCOA4Q13772 614 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 MEIOBQ8N635 442 aa6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 RBM19Q9Y4C8 960 aaKnown RBP6.47□□□□□ -1.37
RNU6-39P-201ENST00000384344 PSME1Q06323 249 aa6.46□□□□□ -1.38
RNU6-39P-201ENST00000384344 TRAF7Q6Q0C0 670 aa6.46□□□□□ -1.38
RNU6-39P-201ENST00000384344 Q6ZVU0 165 aa6.46□□□□□ -1.38
RNU6-39P-201ENST00000384344 DEPDC4Q8N2C3 294 aa6.46□□□□□ -1.38
RNU6-39P-201ENST00000384344 CDCA7Q9BWT1 371 aaPredicted RBP6.46□□□□□ -1.38
RNU6-39P-201ENST00000384344 LILRA1O75019 489 aa6.45□□□□□ -1.38
RNU6-39P-201ENST00000384344 CBLBQ13191 982 aa6.45□□□□□ -1.38
RNU6-39P-201ENST00000384344 ESCO1Q5FWF5 840 aa6.45□□□□□ -1.38
RNU6-39P-201ENST00000384344 LARP1Q6PKG0 1096 aaKnown RBP6.45□□□□□ -1.38
RNU6-39P-201ENST00000384344 GNRH1P01148 92 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 BMP2P12643 396 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 RFX1P22670 979 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 SCTRP47872 440 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 GTF2IP78347 998 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 RELBQ01201 579 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 MRPL14Q6P1L8 145 aaKnown RBP6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 AAASQ9NRG9 546 aa6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 MKRN1Q9UHC7 482 aaKnown RBP6.44□□□□□ -1.38
RNU6-39P-201ENST00000384344 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 PTGIRP43119 386 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 CFAP70Q5T0N1 1121 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 ARID3AQ99856 593 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
RNU6-39P-201ENST00000384344 RASA1P20936 1047 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 GTF2E1P29083 439 aaPredicted RBP6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 ADD1P35611 737 aaKnown RBP6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 C6orf118Q5T5N4 469 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 KIFC2Q96AC6 838 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 PBXIP1Q96AQ6 731 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 AGBL1Q96MI9 1066 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 C1orf115Q9H7X2 142 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 ATP13A2Q9NQ11 1180 aa6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
RNU6-39P-201ENST00000384344 MEN1O00255 615 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 BACH1O14867 736 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 PPP1R15AO75807 674 aaPredicted RBP6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 BMP1P13497 986 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 LARGE2Q8N3Y3 721 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 OGFOD1Q8N543 542 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 PURBQ96QR8 312 aaKnown RBP6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 ARHGEF10LQ9HCE6 1279 aa6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 ACIN1Q9UKV3 1341 aaKnown RBP6.41□□□□□ -1.38
RNU6-39P-201ENST00000384344 SPINT1O43278 529 aa6.4□□□□□ -1.38
RNU6-39P-201ENST00000384344 ZNF395Q9H8N7 513 aaPredicted RBP6.4□□□□□ -1.38
RNU6-39P-201ENST00000384344 A0A1W2PRU2 124 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 GDF10P55107 478 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 CLN3Q13286 438 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 ZNF594Q96JF6 807 aaPredicted RBP6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 ZFP42Q96MM3 310 aa6.39□□□□□ -1.39
RNU6-39P-201ENST00000384344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 TTLL8A6PVC2 850 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 GPC1P35052 558 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 KANK4Q5T7N3 995 aaPredicted RBP6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 CCDC102BQ68D86 513 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 TRIM46Q7Z4K8 759 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 CNKSR1Q969H4 720 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 INSM2Q96T92 566 aaPredicted RBP6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 RAB6BQ9NRW1 208 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 PCDHGA11Q9Y5H2 935 aa6.38□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L15C9J2P7 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L10C9JJH3 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L13C9JLJ4 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L12C9JPN9 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L11C9JVI0 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L21D6R901 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L18D6R9N7 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L22D6RA61 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L17D6RBQ6 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L19D6RCP7 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L20D6RJB6 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 WASLO00401 505 aaPredicted RBP6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 MAN1A2O60476 641 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 INHAP05111 366 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 SEC13P55735 322 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 CLDN10P78369 228 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 USP17L24Q0WX57 530 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 CDCA8Q53HL2 280 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 SIX5Q8N196 739 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 ETNK1Q9HBU6 452 aa6.37□□□□□ -1.39
RNU6-39P-201ENST00000384344 C11orf95C9JLR9 678 aaPredicted RBP6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 TLR1Q15399 786 aa6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 ANKMY2Q8IV38 441 aa6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 NBPF15Q8N660 670 aa6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 FAM200AQ8TCP9 573 aa6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms